RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
KRR1-204ENST00000550898 CEP170Q5SW79 1584 aa11.94□□□□□ -0.5
KRR1-204ENST00000550898 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
KRR1-204ENST00000550898 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
KRR1-204ENST00000550898 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
KRR1-204ENST00000550898 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
KRR1-204ENST00000550898 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
KRR1-204ENST00000550898 SLC39A7Q92504 469 aa11.89□□□□□ -0.51
KRR1-204ENST00000550898 C7P10643 843 aa11.88□□□□□ -0.51
KRR1-204ENST00000550898 ARAP1Q96P48 1450 aa11.88□□□□□ -0.51
KRR1-204ENST00000550898 RAPGEF2Q9Y4G8 1499 aa11.88□□□□□ -0.51
KRR1-204ENST00000550898 EEA1Q15075 1411 aa11.87□□□□□ -0.51
KRR1-204ENST00000550898 KIAA0586Q9BVV6 1533 aa11.87□□□□□ -0.51
KRR1-204ENST00000550898 TTLL13PA6NNM8 815 aa11.86□□□□□ -0.51
KRR1-204ENST00000550898 CYB5RLQ6IPT4 315 aa11.86□□□□□ -0.51
KRR1-204ENST00000550898 JPH4Q96JJ6 628 aa11.85□□□□□ -0.51
KRR1-204ENST00000550898 TIE1P35590 1138 aa11.84□□□□□ -0.51
KRR1-204ENST00000550898 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
KRR1-204ENST00000550898 SHROOM2Q13796 1616 aa11.84□□□□□ -0.51
KRR1-204ENST00000550898 PRXQ9BXM0 1461 aa11.83□□□□□ -0.52
KRR1-204ENST00000550898 PCDHB13Q9Y5F0 798 aa11.83□□□□□ -0.52
KRR1-204ENST00000550898 PRG4Q92954 1404 aaPredicted RBP11.83□□□□□ -0.52
KRR1-204ENST00000550898 COLQQ9Y215 455 aaPredicted RBP11.82□□□□□ -0.52
KRR1-204ENST00000550898 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
KRR1-204ENST00000550898 ERCC6L2Q5T890 1561 aa11.79□□□□□ -0.52
KRR1-204ENST00000550898 IQGAP2Q13576 1575 aa11.79□□□□□ -0.52
KRR1-204ENST00000550898 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
KRR1-204ENST00000550898 FAM9AQ8IZU1 332 aaPredicted RBP11.77□□□□□ -0.53
KRR1-204ENST00000550898 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.53
KRR1-204ENST00000550898 SGIP1Q9BQI5 828 aa11.76□□□□□ -0.53
KRR1-204ENST00000550898 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
KRR1-204ENST00000550898 PYGBP11216 843 aa11.75□□□□□ -0.53
KRR1-204ENST00000550898 VASPP50552 380 aaPredicted RBP11.75□□□□□ -0.53
KRR1-204ENST00000550898 FBXO3Q9UK99 471 aa11.75□□□□□ -0.53
KRR1-204ENST00000550898 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
KRR1-204ENST00000550898 UGGT2Q9NYU1 1516 aa11.73□□□□□ -0.53
KRR1-204ENST00000550898 TNIKQ9UKE5 1360 aa11.72□□□□□ -0.53
KRR1-204ENST00000550898 LCE2DQ5TA82 110 aaPredicted RBP11.72□□□□□ -0.53
KRR1-204ENST00000550898 PTPRGP23470 1445 aa11.7□□□□□ -0.54
KRR1-204ENST00000550898 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
KRR1-204ENST00000550898 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
KRR1-204ENST00000550898 KIF21BO75037 1637 aa11.7□□□□□ -0.54
KRR1-204ENST00000550898 DISP1Q96F81 1524 aa11.7□□□□□ -0.54
KRR1-204ENST00000550898 GOLGA3Q08378 1498 aa11.7□□□□□ -0.54
KRR1-204ENST00000550898 CTTNBP2Q8WZ74 1663 aa11.68□□□□□ -0.54
KRR1-204ENST00000550898 KIAA0556O60303 1618 aa11.68□□□□□ -0.54
KRR1-204ENST00000550898 TTBK1Q5TCY1 1321 aaPredicted RBP11.66□□□□□ -0.54
KRR1-204ENST00000550898 POTEMA6NI47 508 aa11.63□□□□□ -0.55
KRR1-204ENST00000550898 SEC24BO95487 1268 aa11.63□□□□□ -0.55
KRR1-204ENST00000550898 MAMSTRQ6ZN01 415 aa11.63□□□□□ -0.55
KRR1-204ENST00000550898 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
KRR1-204ENST00000550898 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
KRR1-204ENST00000550898 UACAQ9BZF9 1416 aa11.62□□□□□ -0.55
KRR1-204ENST00000550898 UBTFP17480 764 aaKnown RBP11.62□□□□□ -0.55
KRR1-204ENST00000550898 IER5LQ5T953 404 aa11.62□□□□□ -0.55
KRR1-204ENST00000550898 ADCY10Q96PN6 1610 aa11.61□□□□□ -0.55
KRR1-204ENST00000550898 IRX5P78411 483 aaPredicted RBP11.61□□□□□ -0.55
KRR1-204ENST00000550898 POTEGQ6S5H5 508 aa11.61□□□□□ -0.55
KRR1-204ENST00000550898 UHRF1BP1LA0JNW5 1464 aa11.61□□□□□ -0.55
KRR1-204ENST00000550898 SCUBE2Q9NQ36 999 aa11.6□□□□□ -0.55
KRR1-204ENST00000550898 ABCC2Q92887 1545 aa11.6□□□□□ -0.55
KRR1-204ENST00000550898 SAMD9Q5K651 1589 aa11.58□□□□□ -0.55
KRR1-204ENST00000550898 RANGAP1P46060 587 aaPredicted RBP11.58□□□□□ -0.56
KRR1-204ENST00000550898 EFCAB5A4FU69 1503 aa11.58□□□□□ -0.56
KRR1-204ENST00000550898 MAPKBP1O60336 1514 aa11.58□□□□□ -0.56
KRR1-204ENST00000550898 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
KRR1-204ENST00000550898 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
KRR1-204ENST00000550898 FAM163AQ96GL9 167 aaPredicted RBP11.56□□□□□ -0.56
KRR1-204ENST00000550898 FHOD3Q2V2M9 1422 aa11.54□□□□□ -0.56
KRR1-204ENST00000550898 PLSCR2Q9NRY7 297 aa11.54□□□□□ -0.56
KRR1-204ENST00000550898 KDM5BQ9UGL1 1544 aa11.54□□□□□ -0.56
KRR1-204ENST00000550898 ABCA8O94911 1581 aa11.54□□□□□ -0.56
KRR1-204ENST00000550898 ABCC10Q5T3U5 1492 aa11.53□□□□□ -0.56
KRR1-204ENST00000550898 GSE1Q14687 1217 aa11.52□□□□□ -0.57
KRR1-204ENST00000550898 ASXL2Q76L83 1435 aa11.52□□□□□ -0.57
KRR1-204ENST00000550898 CHRM1P11229 460 aaPredicted RBP11.5□□□□□ -0.57
KRR1-204ENST00000550898 PLCG2P16885 1265 aa11.5□□□□□ -0.57
KRR1-204ENST00000550898 FAM69CQ0P6D2 419 aa11.5□□□□□ -0.57
KRR1-204ENST00000550898 ARHGAP35Q9NRY4 1499 aa11.49□□□□□ -0.57
KRR1-204ENST00000550898 FMN1Q68DA7 1419 aa11.48□□□□□ -0.57
KRR1-204ENST00000550898 DIP2BQ9P265 1576 aa11.48□□□□□ -0.57
KRR1-204ENST00000550898 ZCCHC11Q5TAX3 1644 aaKnown RBP11.48□□□□□ -0.57
KRR1-204ENST00000550898 RAPGEF6Q8TEU7 1601 aa11.47□□□□□ -0.57
KRR1-204ENST00000550898 WDR7Q9Y4E6 1490 aa11.47□□□□□ -0.57
KRR1-204ENST00000550898 PDCD7Q8N8D1 485 aaKnown RBP11.47□□□□□ -0.57
KRR1-204ENST00000550898 SPOCK2Q92563 424 aa11.47□□□□□ -0.57
KRR1-204ENST00000550898 OCEL1Q9H607 264 aa11.47□□□□□ -0.57
KRR1-204ENST00000550898 NUP153P49790 1475 aaKnown RBP11.45□□□□□ -0.58
KRR1-204ENST00000550898 CLIP1P30622 1438 aa11.45□□□□□ -0.58
KRR1-204ENST00000550898 ARID3CA6NKF2 412 aa11.45□□□□□ -0.58
KRR1-204ENST00000550898 ZNF467Q7Z7K2 595 aaPredicted RBP11.45□□□□□ -0.58
KRR1-204ENST00000550898 SLAIN1Q8ND83 568 aa11.45□□□□□ -0.58
KRR1-204ENST00000550898 ATP10BO94823 1461 aa11.44□□□□□ -0.58
KRR1-204ENST00000550898 EPRSP07814 1512 aaKnown RBP11.44□□□□□ -0.58
KRR1-204ENST00000550898 GLI2P10070 1586 aa11.43□□□□□ -0.58
KRR1-204ENST00000550898 PSEN1P49768 467 aa11.43□□□□□ -0.58
KRR1-204ENST00000550898 CIZ1Q9ULV3 898 aaPredicted RBP11.42□□□□□ -0.58
KRR1-204ENST00000550898 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
KRR1-204ENST00000550898 HECW1Q76N89 1606 aa11.4□□□□□ -0.58
KRR1-204ENST00000550898 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms