RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
KRR1-204ENST00000550898 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
KRR1-204ENST00000550898 SENP3Q9H4L4 574 aaPredicted RBP21.01■□□□□ 0.95
KRR1-204ENST00000550898 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
KRR1-204ENST00000550898 FOXD1Q16676 465 aa19.75■□□□□ 0.75
KRR1-204ENST00000550898 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
KRR1-204ENST00000550898 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
KRR1-204ENST00000550898 ADRA2BP18089 450 aa18.44■□□□□ 0.54
KRR1-204ENST00000550898 PIAS4Q8N2W9 510 aaPredicted RBP18.36■□□□□ 0.53
KRR1-204ENST00000550898 MSH5O43196 834 aa18.28■□□□□ 0.52
KRR1-204ENST00000550898 POTEDQ86YR6 584 aa18.03■□□□□ 0.48
KRR1-204ENST00000550898 NISCHQ9Y2I1 1504 aa17.11■□□□□ 0.33
KRR1-204ENST00000550898 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
KRR1-204ENST00000550898 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
KRR1-204ENST00000550898 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
KRR1-204ENST00000550898 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
KRR1-204ENST00000550898 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
KRR1-204ENST00000550898 CNKSR2Q8WXI2 1034 aa16.08■□□□□ 0.16
KRR1-204ENST00000550898 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
KRR1-204ENST00000550898 RNF216Q9NWF9 866 aaPredicted RBP15.95■□□□□ 0.14
KRR1-204ENST00000550898 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
KRR1-204ENST00000550898 RNF39Q9H2S5 420 aa15.72■□□□□ 0.11
KRR1-204ENST00000550898 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
KRR1-204ENST00000550898 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
KRR1-204ENST00000550898 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
KRR1-204ENST00000550898 KCNA4P22459 653 aa15.38■□□□□ 0.05
KRR1-204ENST00000550898 C1QBPQ07021 282 aaKnown RBP15.38■□□□□ 0.05
KRR1-204ENST00000550898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.047e-8■■■■□ 20
KRR1-204ENST00000550898 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
KRR1-204ENST00000550898 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
KRR1-204ENST00000550898 SLC4A2P04920 1241 aa15□□□□□ -0.01
KRR1-204ENST00000550898 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
KRR1-204ENST00000550898 ABCC9O60706 1549 aa14.88□□□□□ -0.03
KRR1-204ENST00000550898 CAPN15O75808 1086 aa14.74□□□□□ -0.05
KRR1-204ENST00000550898 DSG3P32926 999 aa14.73□□□□□ -0.05
KRR1-204ENST00000550898 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
KRR1-204ENST00000550898 ABCB7O75027 752 aa14.51□□□□□ -0.09
KRR1-204ENST00000550898 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
KRR1-204ENST00000550898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.39□□□□□ -0.11
KRR1-204ENST00000550898 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
KRR1-204ENST00000550898 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
KRR1-204ENST00000550898 SAMD1Q6SPF0 538 aaPredicted RBP14.38□□□□□ -0.11
KRR1-204ENST00000550898 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
KRR1-204ENST00000550898 APLP2Q06481 763 aa14.34□□□□□ -0.11
KRR1-204ENST00000550898 RB1CC1Q8TDY2 1594 aa14.33□□□□□ -0.12
KRR1-204ENST00000550898 NACADO15069 1562 aa14.31□□□□□ -0.12
KRR1-204ENST00000550898 DCAF8L2P0C7V8 631 aa14.31□□□□□ -0.12
KRR1-204ENST00000550898 ZCCHC6Q5VYS8 1495 aaKnown RBP14.28□□□□□ -0.12
KRR1-204ENST00000550898 ATF5Q9Y2D1 282 aaPredicted RBP14.26□□□□□ -0.13
KRR1-204ENST00000550898 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
KRR1-204ENST00000550898 ZBTB22O15209 634 aa14.24□□□□□ -0.13
KRR1-204ENST00000550898 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
KRR1-204ENST00000550898 DCAF1Q9Y4B6 1507 aa14.18□□□□□ -0.14
KRR1-204ENST00000550898 POLA2Q14181 598 aa14.17□□□□□ -0.14
KRR1-204ENST00000550898 POTEHQ6S545 545 aa14.07□□□□□ -0.16
KRR1-204ENST00000550898 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
KRR1-204ENST00000550898 SCRIBQ14160 1630 aa13.87□□□□□ -0.19
KRR1-204ENST00000550898 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
KRR1-204ENST00000550898 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
KRR1-204ENST00000550898 BICRAQ9NZM4 1560 aa13.83□□□□□ -0.19
KRR1-204ENST00000550898 SHROOM4Q9ULL8 1493 aa13.8□□□□□ -0.2
KRR1-204ENST00000550898 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
KRR1-204ENST00000550898 ATXN8OSP0DMR3 200 aa13.72□□□□□ -0.21
KRR1-204ENST00000550898 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
KRR1-204ENST00000550898 ZBTB12Q9Y330 459 aaPredicted RBP13.68□□□□□ -0.22
KRR1-204ENST00000550898 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
KRR1-204ENST00000550898 REM2Q8IYK8 340 aaPredicted RBP13.59□□□□□ -0.23
KRR1-204ENST00000550898 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
KRR1-204ENST00000550898 EIF4G1Q04637 1599 aaKnown RBP13.51□□□□□ -0.25
KRR1-204ENST00000550898 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
KRR1-204ENST00000550898 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
KRR1-204ENST00000550898 PIP4P2Q8N4L2 257 aa13.43□□□□□ -0.26
KRR1-204ENST00000550898 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
KRR1-204ENST00000550898 FBLN2P98095 1184 aa13.4□□□□□ -0.26
KRR1-204ENST00000550898 EHMT2Q96KQ7 1210 aa13.4□□□□□ -0.26
KRR1-204ENST00000550898 CECR2Q9BXF3 1484 aa13.38□□□□□ -0.27
KRR1-204ENST00000550898 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
KRR1-204ENST00000550898 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
KRR1-204ENST00000550898 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
KRR1-204ENST00000550898 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
KRR1-204ENST00000550898 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
KRR1-204ENST00000550898 SSUH2Q9Y2M2 353 aa13.27□□□□□ -0.29
KRR1-204ENST00000550898 SMARCA4P51532 1647 aa13.26□□□□□ -0.29
KRR1-204ENST00000550898 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
KRR1-204ENST00000550898 NCAPD3P42695 1498 aa13.22□□□□□ -0.29
KRR1-204ENST00000550898 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
KRR1-204ENST00000550898 SMARCA2P51531 1590 aa13.21□□□□□ -0.29
KRR1-204ENST00000550898 MROH2BQ7Z745 1585 aa13.18□□□□□ -0.3
KRR1-204ENST00000550898 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
KRR1-204ENST00000550898 EVX2Q03828 476 aa13.16□□□□□ -0.3
KRR1-204ENST00000550898 HMGXB3Q12766 1538 aa13.15□□□□□ -0.3
KRR1-204ENST00000550898 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
KRR1-204ENST00000550898 PEG3Q9GZU2 1588 aa13.15□□□□□ -0.3
KRR1-204ENST00000550898 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
KRR1-204ENST00000550898 HAX1O00165 279 aa13.11□□□□□ -0.31
KRR1-204ENST00000550898 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
KRR1-204ENST00000550898 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
KRR1-204ENST00000550898 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
KRR1-204ENST00000550898 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
KRR1-204ENST00000550898 WIZO95785 1651 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms