RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 CDC42BPBQ9Y5S2 1711 aa15.74■□□□□ 0.11
RAB5C-207ENST00000550504 ARHGAP5Q13017 1502 aa15.73■□□□□ 0.11
RAB5C-207ENST00000550504 MAP3K4Q9Y6R4 1608 aa15.72■□□□□ 0.11
RAB5C-207ENST00000550504 MIA2Q96PC5 1412 aa15.72■□□□□ 0.11
RAB5C-207ENST00000550504 FAM50AQ14320 339 aaKnown RBP15.72■□□□□ 0.11
RAB5C-207ENST00000550504 PTPN23Q9H3S7 1636 aa15.72■□□□□ 0.11
RAB5C-207ENST00000550504 ZNF644Q9H582 1327 aaPredicted RBP15.71■□□□□ 0.11
RAB5C-207ENST00000550504 RRBP1Q9P2E9 1410 aaKnown RBP15.71■□□□□ 0.11
RAB5C-207ENST00000550504 TSPOAP1O95153 1857 aa15.69■□□□□ 0.1
RAB5C-207ENST00000550504 TRIM26Q12899 539 aaPredicted RBP15.69■□□□□ 0.1
RAB5C-207ENST00000550504 EFCAB2Q5VUJ9 269 aa15.69■□□□□ 0.1
RAB5C-207ENST00000550504 CAMSAP2Q08AD1 1489 aa15.69■□□□□ 0.1
RAB5C-207ENST00000550504 FANCAO15360 1455 aa15.68■□□□□ 0.1
RAB5C-207ENST00000550504 ARAP3Q8WWN8 1544 aa15.68■□□□□ 0.1
RAB5C-207ENST00000550504 SAMD9LQ8IVG5 1584 aa15.67■□□□□ 0.1
RAB5C-207ENST00000550504 TCOF1Q13428 1488 aaKnown RBP15.67■□□□□ 0.1
RAB5C-207ENST00000550504 ITGAEP38570 1179 aa15.66■□□□□ 0.1
RAB5C-207ENST00000550504 PPRC1Q5VV67 1664 aaKnown RBP15.64■□□□□ 0.09
RAB5C-207ENST00000550504 CFAP74Q9C0B2 1584 aa15.63■□□□□ 0.09
RAB5C-207ENST00000550504 HNRNPMP52272 730 aaKnown RBP eCLIP15.63■□□□□ 0.09
RAB5C-207ENST00000550504 AKNAQ7Z591 1439 aa15.62■□□□□ 0.09
RAB5C-207ENST00000550504 SYCP2Q9BX26 1530 aa15.62■□□□□ 0.09
RAB5C-207ENST00000550504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.62■□□□□ 0.09
RAB5C-207ENST00000550504 ADGRL1O94910 1474 aa15.61■□□□□ 0.09
RAB5C-207ENST00000550504 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
RAB5C-207ENST00000550504 TEX14Q8IWB6 1497 aa15.61■□□□□ 0.09
RAB5C-207ENST00000550504 NEO1Q92859 1461 aa15.61■□□□□ 0.09
RAB5C-207ENST00000550504 PCGF6Q9BYE7 350 aa15.61■□□□□ 0.09
RAB5C-207ENST00000550504 ABCC1P33527 1531 aa15.61■□□□□ 0.09
RAB5C-207ENST00000550504 ARHGEF12Q9NZN5 1544 aa15.6■□□□□ 0.09
RAB5C-207ENST00000550504 KDM6BO15054 1643 aa15.6■□□□□ 0.09
RAB5C-207ENST00000550504 SCAPERQ9BY12 1400 aa15.6■□□□□ 0.09
RAB5C-207ENST00000550504 KDM4FA0A1W2PPD8 638 aa15.59■□□□□ 0.09
RAB5C-207ENST00000550504 DAPK1P53355 1430 aa15.58■□□□□ 0.08
RAB5C-207ENST00000550504 KIAA1107Q9UPP5 1409 aa15.58■□□□□ 0.08
RAB5C-207ENST00000550504 MBD5Q9P267 1494 aa15.58■□□□□ 0.08
RAB5C-207ENST00000550504 DNMT1P26358 1616 aaKnown RBP15.57■□□□□ 0.08
RAB5C-207ENST00000550504 ABCC5O15440 1437 aa15.57■□□□□ 0.08
RAB5C-207ENST00000550504 TRAPPC8Q9Y2L5 1435 aa15.57■□□□□ 0.08
RAB5C-207ENST00000550504 CCDC141Q6ZP82 1450 aa15.56■□□□□ 0.08
RAB5C-207ENST00000550504 ARHGEF5Q12774 1597 aa15.56■□□□□ 0.08
RAB5C-207ENST00000550504 PTPRKQ15262 1439 aa15.55■□□□□ 0.08
RAB5C-207ENST00000550504 CHIC2Q9UKJ5 165 aa15.55■□□□□ 0.08
RAB5C-207ENST00000550504 AFAP1Q8N556 730 aa15.54■□□□□ 0.08
RAB5C-207ENST00000550504 CROCC2H7BZ55 1655 aa15.54■□□□□ 0.08
RAB5C-207ENST00000550504 DENND4BO75064 1496 aaPredicted RBP15.53■□□□□ 0.08
RAB5C-207ENST00000550504 TSPY4P0CV99 314 aa15.53■□□□□ 0.08
RAB5C-207ENST00000550504 TSPY10P0CW01 314 aa15.53■□□□□ 0.08
RAB5C-207ENST00000550504 RSPH4AQ5TD94 716 aa15.53■□□□□ 0.08
RAB5C-207ENST00000550504 RAPGEF3O95398 923 aa15.52■□□□□ 0.08
RAB5C-207ENST00000550504 C9orf84Q5VXU9 1444 aa15.51■□□□□ 0.07
RAB5C-207ENST00000550504 POGZQ7Z3K3 1410 aa15.51■□□□□ 0.07
RAB5C-207ENST00000550504 MYT1LQ9UL68 1186 aa15.5■□□□□ 0.07
RAB5C-207ENST00000550504 ZNF518AQ6AHZ1 1483 aa15.5■□□□□ 0.07
RAB5C-207ENST00000550504 SPAG9O60271 1321 aaKnown RBP15.49■□□□□ 0.07
RAB5C-207ENST00000550504 COL17A1Q9UMD9 1497 aaPredicted RBP15.49■□□□□ 0.07
RAB5C-207ENST00000550504 SHANK2Q9UPX8 1470 aa15.49■□□□□ 0.07
RAB5C-207ENST00000550504 RICTORQ6R327 1708 aa15.48■□□□□ 0.07
RAB5C-207ENST00000550504 RRP7BPQ9NSQ0 103 aa15.48■□□□□ 0.07
RAB5C-207ENST00000550504 FRMPD1Q5SYB0 1578 aa15.48■□□□□ 0.07
RAB5C-207ENST00000550504 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
RAB5C-207ENST00000550504 ADGBQ8N7X0 1667 aa15.47■□□□□ 0.07
RAB5C-207ENST00000550504 KDM5CP41229 1560 aa15.46■□□□□ 0.07
RAB5C-207ENST00000550504 ATP7AQ04656 1500 aa15.45■□□□□ 0.06
RAB5C-207ENST00000550504 ZFYVE16Q7Z3T8 1539 aa15.45■□□□□ 0.06
RAB5C-207ENST00000550504 ANKRD30AQ9BXX3 1397 aa15.45■□□□□ 0.06
RAB5C-207ENST00000550504 INO80Q9ULG1 1556 aaPredicted RBP15.45■□□□□ 0.06
RAB5C-207ENST00000550504 ROCK1Q13464 1354 aa15.44■□□□□ 0.06
RAB5C-207ENST00000550504 ADGRL2O95490 1459 aa15.44■□□□□ 0.06
RAB5C-207ENST00000550504 HECW2Q9P2P5 1572 aa15.44■□□□□ 0.06
RAB5C-207ENST00000550504 NCOA1Q15788 1441 aa15.43■□□□□ 0.06
RAB5C-207ENST00000550504 RTEL1-TNFRSF6BF6WH68 1400 aa15.43■□□□□ 0.06
RAB5C-207ENST00000550504 KIDINS220Q9ULH0 1771 aa15.42■□□□□ 0.06
RAB5C-207ENST00000550504 MLH3Q9UHC1 1453 aa15.42■□□□□ 0.06
RAB5C-207ENST00000550504 KIF15Q9NS87 1388 aa15.42■□□□□ 0.06
RAB5C-207ENST00000550504 HFM1A2PYH4 1435 aa15.42■□□□□ 0.06
RAB5C-207ENST00000550504 ZMYM4Q5VZL5 1548 aa15.41■□□□□ 0.06
RAB5C-207ENST00000550504 NAIPQ13075 1403 aa15.41■□□□□ 0.06
RAB5C-207ENST00000550504 PLXNC1O60486 1568 aa15.41■□□□□ 0.06
RAB5C-207ENST00000550504 GCC2Q8IWJ2 1684 aa15.4■□□□□ 0.06
RAB5C-207ENST00000550504 SETD5Q9C0A6 1442 aa15.4■□□□□ 0.06
RAB5C-207ENST00000550504 YEATS2Q9ULM3 1422 aa15.39■□□□□ 0.05
RAB5C-207ENST00000550504 ABCA6Q8N139 1617 aa15.38■□□□□ 0.05
RAB5C-207ENST00000550504 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
RAB5C-207ENST00000550504 DIP2CQ9Y2E4 1556 aa15.36■□□□□ 0.05
RAB5C-207ENST00000550504 MAGI2Q86UL8 1455 aa15.36■□□□□ 0.05
RAB5C-207ENST00000550504 DUOX2Q9NRD8 1548 aa15.36■□□□□ 0.05
RAB5C-207ENST00000550504 ANKRD50Q9ULJ7 1429 aa15.34■□□□□ 0.05
RAB5C-207ENST00000550504 A2MP01023 1474 aa15.34■□□□□ 0.05
RAB5C-207ENST00000550504 ILDR1Q86SU0 546 aaPredicted RBP15.33■□□□□ 0.04
RAB5C-207ENST00000550504 DHX29Q7Z478 1369 aaKnown RBP15.33■□□□□ 0.04
RAB5C-207ENST00000550504 ARHGEF40Q8TER5 1519 aa15.33■□□□□ 0.04
RAB5C-207ENST00000550504 ATP10AO60312 1499 aa15.32■□□□□ 0.04
RAB5C-207ENST00000550504 ERBINQ96RT1 1412 aa15.31■□□□□ 0.04
RAB5C-207ENST00000550504 TRIM52Q96A61 297 aa15.29■□□□□ 0.04
RAB5C-207ENST00000550504 KIF3BO15066 747 aa15.28■□□□□ 0.04
RAB5C-207ENST00000550504 EIF2AK4Q9P2K8 1649 aaKnown RBP15.26■□□□□ 0.03
RAB5C-207ENST00000550504 HRCP23327 699 aa15.26■□□□□ 0.03
RAB5C-207ENST00000550504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.031e-8■■■□□ 15.5
RAB5C-207ENST00000550504 REREQ9P2R6 1566 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms