RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 FYCO1Q9BQS8 1478 aa17.56■□□□□ 0.4
LETMD1-223ENST00000550442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.54■□□□□ 0.4
LETMD1-223ENST00000550442 TIAM1Q13009 1591 aa17.54■□□□□ 0.4
LETMD1-223ENST00000550442 ARID3CA6NKF2 412 aa17.54■□□□□ 0.4
LETMD1-223ENST00000550442 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
LETMD1-223ENST00000550442 YEATS2Q9ULM3 1422 aa17.53■□□□□ 0.4
LETMD1-223ENST00000550442 FER1L4A9Z1Z3 1794 aa17.53■□□□□ 0.4
LETMD1-223ENST00000550442 PREX1Q8TCU6 1659 aa17.52■□□□□ 0.4
LETMD1-223ENST00000550442 AKNAQ7Z591 1439 aa17.52■□□□□ 0.4
LETMD1-223ENST00000550442 CCNB3Q8WWL7 1395 aa17.52■□□□□ 0.39
LETMD1-223ENST00000550442 DENND4BO75064 1496 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-223ENST00000550442 ATP10BO94823 1461 aa17.5■□□□□ 0.39
LETMD1-223ENST00000550442 LRRC9Q6ZRR7 1453 aa17.5■□□□□ 0.39
LETMD1-223ENST00000550442 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
LETMD1-223ENST00000550442 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
LETMD1-223ENST00000550442 RANGAP1P46060 587 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-223ENST00000550442 MLECQ14165 292 aa17.48■□□□□ 0.39
LETMD1-223ENST00000550442 STRCQ7RTU9 1775 aa17.47■□□□□ 0.39
LETMD1-223ENST00000550442 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
LETMD1-223ENST00000550442 ZFYVE16Q7Z3T8 1539 aa17.45■□□□□ 0.38
LETMD1-223ENST00000550442 FHOD3Q2V2M9 1422 aa17.45■□□□□ 0.38
LETMD1-223ENST00000550442 SAMD9Q5K651 1589 aa17.45■□□□□ 0.38
LETMD1-223ENST00000550442 CFAP74Q9C0B2 1584 aa17.44■□□□□ 0.38
LETMD1-223ENST00000550442 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
LETMD1-223ENST00000550442 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
LETMD1-223ENST00000550442 SIGLEC1Q9BZZ2 1709 aa17.42■□□□□ 0.38
LETMD1-223ENST00000550442 ZMYM4Q5VZL5 1548 aa17.42■□□□□ 0.38
LETMD1-223ENST00000550442 IQSEC2Q5JU85 1478 aa17.41■□□□□ 0.38
LETMD1-223ENST00000550442 MAGI2Q86UL8 1455 aa17.4■□□□□ 0.38
LETMD1-223ENST00000550442 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
LETMD1-223ENST00000550442 PTPRTO14522 1441 aa17.39■□□□□ 0.38
LETMD1-223ENST00000550442 UHRF1BP1Q6BDS2 1440 aa17.39■□□□□ 0.38
LETMD1-223ENST00000550442 CCDC18Q5T9S5 1454 aa17.37■□□□□ 0.37
LETMD1-223ENST00000550442 ARHGEF12Q9NZN5 1544 aa17.37■□□□□ 0.37
LETMD1-223ENST00000550442 P3H3Q8IVL6 736 aa17.36■□□□□ 0.37
LETMD1-223ENST00000550442 RAPGEF6Q8TEU7 1601 aa17.36■□□□□ 0.37
LETMD1-223ENST00000550442 CEBPAP49715 358 aaPredicted RBP17.35■□□□□ 0.37
LETMD1-223ENST00000550442 LTBP4Q8N2S1 1624 aa17.34■□□□□ 0.37
LETMD1-223ENST00000550442 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.36
LETMD1-223ENST00000550442 HECW1Q76N89 1606 aa17.32■□□□□ 0.36
LETMD1-223ENST00000550442 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
LETMD1-223ENST00000550442 ATP10AO60312 1499 aa17.3■□□□□ 0.36
LETMD1-223ENST00000550442 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
LETMD1-223ENST00000550442 C9orf84Q5VXU9 1444 aa17.29■□□□□ 0.36
LETMD1-223ENST00000550442 DHX57Q6P158 1386 aaKnown RBP17.28■□□□□ 0.36
LETMD1-223ENST00000550442 SETD5Q9C0A6 1442 aa17.28■□□□□ 0.36
LETMD1-223ENST00000550442 UBAP1LF5GYI3 381 aa17.27■□□□□ 0.36
LETMD1-223ENST00000550442 MTUS2Q5JR59 1369 aa17.26■□□□□ 0.35
LETMD1-223ENST00000550442 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
LETMD1-223ENST00000550442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.26■□□□□ 0.35
LETMD1-223ENST00000550442 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
LETMD1-223ENST00000550442 SCAPERQ9BY12 1400 aa17.24■□□□□ 0.35
LETMD1-223ENST00000550442 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
LETMD1-223ENST00000550442 MED1Q15648 1581 aaPredicted RBP17.21■□□□□ 0.35
LETMD1-223ENST00000550442 NCOA1Q15788 1441 aa17.21■□□□□ 0.34
LETMD1-223ENST00000550442 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.34
LETMD1-223ENST00000550442 C3P01024 1663 aa17.2■□□□□ 0.34
LETMD1-223ENST00000550442 ESF1Q9H501 851 aaKnown RBP17.2■□□□□ 0.34
LETMD1-223ENST00000550442 SUPT6HQ7KZ85 1726 aaKnown RBP17.2■□□□□ 0.34
LETMD1-223ENST00000550442 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
LETMD1-223ENST00000550442 MYOM3Q5VTT5 1437 aa17.18■□□□□ 0.34
LETMD1-223ENST00000550442 MIA2Q96PC5 1412 aa17.18■□□□□ 0.34
LETMD1-223ENST00000550442 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
LETMD1-223ENST00000550442 RAB3GAP2Q9H2M9 1393 aa17.16■□□□□ 0.34
LETMD1-223ENST00000550442 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
LETMD1-223ENST00000550442 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
LETMD1-223ENST00000550442 MYT1LQ9UL68 1186 aa17.15■□□□□ 0.34
LETMD1-223ENST00000550442 PLCH2O75038 1416 aa17.14■□□□□ 0.33
LETMD1-223ENST00000550442 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
LETMD1-223ENST00000550442 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
LETMD1-223ENST00000550442 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
LETMD1-223ENST00000550442 FAM50AQ14320 339 aaKnown RBP17.13■□□□□ 0.33
LETMD1-223ENST00000550442 SCAF1Q9H7N4 1312 aaKnown RBP17.13■□□□□ 0.33
LETMD1-223ENST00000550442 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
LETMD1-223ENST00000550442 EFCAB2Q5VUJ9 269 aa17.11■□□□□ 0.33
LETMD1-223ENST00000550442 HFM1A2PYH4 1435 aa17.11■□□□□ 0.33
LETMD1-223ENST00000550442 TCOF1Q13428 1488 aaKnown RBP17.11■□□□□ 0.33
LETMD1-223ENST00000550442 HSPA1LP34931 641 aa17.1■□□□□ 0.33
LETMD1-223ENST00000550442 MYO5CQ9NQX4 1742 aa17.1■□□□□ 0.33
LETMD1-223ENST00000550442 REREQ9P2R6 1566 aa17.09■□□□□ 0.33
LETMD1-223ENST00000550442 DIP2CQ9Y2E4 1556 aa17.08■□□□□ 0.32
LETMD1-223ENST00000550442 CNTLNQ9NXG0 1405 aa17.07■□□□□ 0.32
LETMD1-223ENST00000550442 NCKAP5LQ9HCH0 1330 aa17.07■□□□□ 0.32
LETMD1-223ENST00000550442 PIP4K2BP78356 416 aa17.07■□□□□ 0.32
LETMD1-223ENST00000550442 KDM5CP41229 1560 aa17.06■□□□□ 0.32
LETMD1-223ENST00000550442 AGLP35573 1532 aa17.06■□□□□ 0.32
LETMD1-223ENST00000550442 CENPBP07199 599 aaPredicted RBP17.06■□□□□ 0.32
LETMD1-223ENST00000550442 TOM1O60784 492 aa17.04■□□□□ 0.32
LETMD1-223ENST00000550442 PKD2Q13563 968 aa17.04■□□□□ 0.32
LETMD1-223ENST00000550442 AFAP1Q8N556 730 aa17.04■□□□□ 0.32
LETMD1-223ENST00000550442 NPATQ14207 1427 aa17.03■□□□□ 0.32
LETMD1-223ENST00000550442 CDK13Q14004 1512 aaKnown RBP17.02■□□□□ 0.32
LETMD1-223ENST00000550442 ABCA6Q8N139 1617 aa17.02■□□□□ 0.31
LETMD1-223ENST00000550442 PLA2R1Q13018 1463 aa17.01■□□□□ 0.31
LETMD1-223ENST00000550442 PTPN23Q9H3S7 1636 aa17.01■□□□□ 0.31
LETMD1-223ENST00000550442 ITGAEP38570 1179 aa17.01■□□□□ 0.31
LETMD1-223ENST00000550442 LRRIQ1Q96JM4 1722 aa17.01■□□□□ 0.31
LETMD1-223ENST00000550442 PPP6R1Q9UPN7 881 aa17■□□□□ 0.31
LETMD1-223ENST00000550442 MROH2AA6NES4 1674 aa17■□□□□ 0.31
LETMD1-223ENST00000550442 ARHGAP5Q13017 1502 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms