RNA–Protein interactions for RNA: ENST00000550082.5

NR4A1-213, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5 BASIC

Gene NR4A1, Length 2,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-213ENST00000550082 CDC42BPBQ9Y5S2 1711 aa22.75■■□□□ 1.23
NR4A1-213ENST00000550082 ZNF644Q9H582 1327 aaPredicted RBP22.75■■□□□ 1.23
NR4A1-213ENST00000550082 CFDP1Q9UEE9 299 aaPredicted RBP22.73■■□□□ 1.23
NR4A1-213ENST00000550082 ARHGAP5Q13017 1502 aa22.73■■□□□ 1.23
NR4A1-213ENST00000550082 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
NR4A1-213ENST00000550082 FANCAO15360 1455 aa22.71■■□□□ 1.23
NR4A1-213ENST00000550082 PREX2Q70Z35 1606 aa22.7■■□□□ 1.22
NR4A1-213ENST00000550082 EFCAB2Q5VUJ9 269 aa22.69■■□□□ 1.22
NR4A1-213ENST00000550082 COL17A1Q9UMD9 1497 aaPredicted RBP22.67■■□□□ 1.22
NR4A1-213ENST00000550082 AKNAQ7Z591 1439 aa22.66■■□□□ 1.22
NR4A1-213ENST00000550082 RAPGEF3O95398 923 aa22.65■■□□□ 1.22
NR4A1-213ENST00000550082 MYOM3Q5VTT5 1437 aa22.65■■□□□ 1.22
NR4A1-213ENST00000550082 HNRNPMP52272 730 aaKnown RBP eCLIP22.65■■□□□ 1.22
NR4A1-213ENST00000550082 TEX14Q8IWB6 1497 aa22.64■■□□□ 1.22
NR4A1-213ENST00000550082 SAMD9LQ8IVG5 1584 aa22.63■■□□□ 1.21
NR4A1-213ENST00000550082 ITSN2Q9NZM3 1697 aa22.62■■□□□ 1.21
NR4A1-213ENST00000550082 ARHGEF12Q9NZN5 1544 aa22.61■■□□□ 1.21
NR4A1-213ENST00000550082 SCAPERQ9BY12 1400 aa22.6■■□□□ 1.21
NR4A1-213ENST00000550082 ADGRL1O94910 1474 aa22.6■■□□□ 1.21
NR4A1-213ENST00000550082 AFAP1Q8N556 730 aa22.59■■□□□ 1.21
NR4A1-213ENST00000550082 RRBP1Q9P2E9 1410 aaKnown RBP22.59■■□□□ 1.21
NR4A1-213ENST00000550082 NEO1Q92859 1461 aa22.59■■□□□ 1.21
NR4A1-213ENST00000550082 FAM50AQ14320 339 aaKnown RBP22.58■■□□□ 1.21
NR4A1-213ENST00000550082 FGD6Q6ZV73 1430 aa22.58■■□□□ 1.21
NR4A1-213ENST00000550082 ARAP3Q8WWN8 1544 aa22.58■■□□□ 1.21
NR4A1-213ENST00000550082 CAMSAP2Q08AD1 1489 aa22.56■■□□□ 1.2
NR4A1-213ENST00000550082 SYCP2Q9BX26 1530 aa22.56■■□□□ 1.2
NR4A1-213ENST00000550082 TRAPPC8Q9Y2L5 1435 aa22.55■■□□□ 1.2
NR4A1-213ENST00000550082 KDM6BO15054 1643 aa22.55■■□□□ 1.2
NR4A1-213ENST00000550082 PTPN23Q9H3S7 1636 aa22.54■■□□□ 1.2
NR4A1-213ENST00000550082 ABCC1P33527 1531 aa22.54■■□□□ 1.2
NR4A1-213ENST00000550082 CFAP74Q9C0B2 1584 aa22.53■■□□□ 1.2
NR4A1-213ENST00000550082 MIA2Q96PC5 1412 aa22.53■■□□□ 1.2
NR4A1-213ENST00000550082 ITGAEP38570 1179 aa22.52■■□□□ 1.2
NR4A1-213ENST00000550082 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.19
NR4A1-213ENST00000550082 DENND4BO75064 1496 aaPredicted RBP22.51■■□□□ 1.19
NR4A1-213ENST00000550082 MBD5Q9P267 1494 aa22.49■■□□□ 1.19
NR4A1-213ENST00000550082 FRMPD1Q5SYB0 1578 aa22.49■■□□□ 1.19
NR4A1-213ENST00000550082 MYT1LQ9UL68 1186 aa22.47■■□□□ 1.19
NR4A1-213ENST00000550082 POGZQ7Z3K3 1410 aa22.47■■□□□ 1.19
NR4A1-213ENST00000550082 RICTORQ6R327 1708 aa22.46■■□□□ 1.19
NR4A1-213ENST00000550082 CHIC2Q9UKJ5 165 aa22.45■■□□□ 1.18
NR4A1-213ENST00000550082 TCOF1Q13428 1488 aaKnown RBP22.45■■□□□ 1.18
NR4A1-213ENST00000550082 KIAA1107Q9UPP5 1409 aa22.45■■□□□ 1.18
NR4A1-213ENST00000550082 PLEKHH2Q8IVE3 1493 aa22.42■■□□□ 1.18
NR4A1-213ENST00000550082 ZNF518AQ6AHZ1 1483 aa22.41■■□□□ 1.18
NR4A1-213ENST00000550082 ABCC5O15440 1437 aa22.4■■□□□ 1.18
NR4A1-213ENST00000550082 PTPRKQ15262 1439 aa22.39■■□□□ 1.18
NR4A1-213ENST00000550082 YEATS2Q9ULM3 1422 aa22.39■■□□□ 1.18
NR4A1-213ENST00000550082 SPAG9O60271 1321 aaKnown RBP22.39■■□□□ 1.17
NR4A1-213ENST00000550082 CCDC141Q6ZP82 1450 aa22.38■■□□□ 1.17
NR4A1-213ENST00000550082 DAPK1P53355 1430 aa22.38■■□□□ 1.17
NR4A1-213ENST00000550082 TSPY4P0CV99 314 aa22.36■■□□□ 1.17
NR4A1-213ENST00000550082 TSPY10P0CW01 314 aa22.36■■□□□ 1.17
NR4A1-213ENST00000550082 KDM5CP41229 1560 aa22.36■■□□□ 1.17
NR4A1-213ENST00000550082 ARHGEF5Q12774 1597 aa22.35■■□□□ 1.17
NR4A1-213ENST00000550082 DNMT1P26358 1616 aaKnown RBP22.35■■□□□ 1.17
NR4A1-213ENST00000550082 KIDINS220Q9ULH0 1771 aa22.33■■□□□ 1.16
NR4A1-213ENST00000550082 RSPH4AQ5TD94 716 aa22.32■■□□□ 1.16
NR4A1-213ENST00000550082 RRP7BPQ9NSQ0 103 aa22.31■■□□□ 1.16
NR4A1-213ENST00000550082 HECW2Q9P2P5 1572 aa22.31■■□□□ 1.16
NR4A1-213ENST00000550082 C9orf84Q5VXU9 1444 aa22.31■■□□□ 1.16
NR4A1-213ENST00000550082 ZMYM4Q5VZL5 1548 aa22.3■■□□□ 1.16
NR4A1-213ENST00000550082 ATP7AQ04656 1500 aa22.29■■□□□ 1.16
NR4A1-213ENST00000550082 ZFYVE16Q7Z3T8 1539 aa22.29■■□□□ 1.16
NR4A1-213ENST00000550082 MLH3Q9UHC1 1453 aa22.29■■□□□ 1.16
NR4A1-213ENST00000550082 CROCC2H7BZ55 1655 aa22.29■■□□□ 1.16
NR4A1-213ENST00000550082 ABCA6Q8N139 1617 aa22.29■■□□□ 1.16
NR4A1-213ENST00000550082 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.28■■□□□ 1.16
NR4A1-213ENST00000550082 INO80Q9ULG1 1556 aaPredicted RBP22.28■■□□□ 1.16
NR4A1-213ENST00000550082 SIGLEC1Q9BZZ2 1709 aa22.26■■□□□ 1.15
NR4A1-213ENST00000550082 DIP2CQ9Y2E4 1556 aa22.25■■□□□ 1.15
NR4A1-213ENST00000550082 MAGI2Q86UL8 1455 aa22.23■■□□□ 1.15
NR4A1-213ENST00000550082 ARHGEF40Q8TER5 1519 aa22.23■■□□□ 1.15
NR4A1-213ENST00000550082 RTEL1-TNFRSF6BF6WH68 1400 aa22.22■■□□□ 1.15
NR4A1-213ENST00000550082 NCOA1Q15788 1441 aa22.21■■□□□ 1.15
NR4A1-213ENST00000550082 MAST1Q9Y2H9 1570 aa22.21■■□□□ 1.15
NR4A1-213ENST00000550082 MLECQ14165 292 aa22.21■■□□□ 1.15
NR4A1-213ENST00000550082 ATP10AO60312 1499 aa22.21■■□□□ 1.15
NR4A1-213ENST00000550082 SHANK2Q9UPX8 1470 aa22.21■■□□□ 1.15
NR4A1-213ENST00000550082 ARID4BQ4LE39 1312 aaPredicted RBP22.21■■□□□ 1.15
NR4A1-213ENST00000550082 DHX57Q6P158 1386 aaKnown RBP22.2■■□□□ 1.14
NR4A1-213ENST00000550082 RAB3GAP2Q9H2M9 1393 aa22.2■■□□□ 1.14
NR4A1-213ENST00000550082 KIF15Q9NS87 1388 aa22.19■■□□□ 1.14
NR4A1-213ENST00000550082 ADGBQ8N7X0 1667 aa22.19■■□□□ 1.14
NR4A1-213ENST00000550082 ANKRD30AQ9BXX3 1397 aa22.18■■□□□ 1.14
NR4A1-213ENST00000550082 A2MP01023 1474 aa22.16■■□□□ 1.14
NR4A1-213ENST00000550082 ADGRL2O95490 1459 aa22.15■■□□□ 1.14
NR4A1-213ENST00000550082 DHX29Q7Z478 1369 aaKnown RBP22.14■■□□□ 1.13
NR4A1-213ENST00000550082 KIF3BO15066 747 aa22.14■■□□□ 1.13
NR4A1-213ENST00000550082 PLXNC1O60486 1568 aa22.13■■□□□ 1.13
NR4A1-213ENST00000550082 SETD5Q9C0A6 1442 aa22.13■■□□□ 1.13
NR4A1-213ENST00000550082 GGT6Q6P531 493 aa22.12■■□□□ 1.13
NR4A1-213ENST00000550082 ROCK1Q13464 1354 aa22.1■■□□□ 1.13
NR4A1-213ENST00000550082 NAIPQ13075 1403 aa22.08■■□□□ 1.13
NR4A1-213ENST00000550082 DUOX2Q9NRD8 1548 aa22.08■■□□□ 1.12
NR4A1-213ENST00000550082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.07■■□□□ 1.12
NR4A1-213ENST00000550082 ANKRD50Q9ULJ7 1429 aa22.07■■□□□ 1.12
NR4A1-213ENST00000550082 REREQ9P2R6 1566 aa22.03■■□□□ 1.12
NR4A1-213ENST00000550082 HFM1A2PYH4 1435 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms