RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 C7P10643 843 aa11.38□□□□□ -0.59
TMEM116-208ENST00000549537 MS4A3Q96HJ5 214 aa11.38□□□□□ -0.59
TMEM116-208ENST00000549537 ADCY10Q96PN6 1610 aa11.38□□□□□ -0.59
TMEM116-208ENST00000549537 TSPYL2Q9H2G4 693 aaPredicted RBP11.37□□□□□ -0.59
TMEM116-208ENST00000549537 DISP1Q96F81 1524 aa11.35□□□□□ -0.59
TMEM116-208ENST00000549537 PRXQ9BXM0 1461 aa11.34□□□□□ -0.59
TMEM116-208ENST00000549537 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
TMEM116-208ENST00000549537 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-208ENST00000549537 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
TMEM116-208ENST00000549537 METRNQ9UJH8 293 aa11.34□□□□□ -0.59
TMEM116-208ENST00000549537 MAPKBP1O60336 1514 aa11.34□□□□□ -0.59
TMEM116-208ENST00000549537 UGGT2Q9NYU1 1516 aa11.34□□□□□ -0.59
TMEM116-208ENST00000549537 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
TMEM116-208ENST00000549537 CCDC61Q9Y6R9 512 aa11.32□□□□□ -0.6
TMEM116-208ENST00000549537 CARMIL2Q6F5E8 1435 aa11.32□□□□□ -0.6
TMEM116-208ENST00000549537 TNIKQ9UKE5 1360 aa11.31□□□□□ -0.6
TMEM116-208ENST00000549537 CTTNBP2Q8WZ74 1663 aa11.31□□□□□ -0.6
TMEM116-208ENST00000549537 MIER1Q8N108 512 aa11.31□□□□□ -0.6
TMEM116-208ENST00000549537 PTPRGP23470 1445 aa11.31□□□□□ -0.6
TMEM116-208ENST00000549537 KIAA0556O60303 1618 aa11.3□□□□□ -0.6
TMEM116-208ENST00000549537 ABCC10Q5T3U5 1492 aa11.29□□□□□ -0.6
TMEM116-208ENST00000549537 DIP2BQ9P265 1576 aa11.28□□□□□ -0.6
TMEM116-208ENST00000549537 UHRF1BP1LA0JNW5 1464 aa11.27□□□□□ -0.6
TMEM116-208ENST00000549537 ABCC2Q92887 1545 aa11.27□□□□□ -0.61
TMEM116-208ENST00000549537 KIF12Q96FN5 646 aa11.27□□□□□ -0.61
TMEM116-208ENST00000549537 PLSCR2Q9NRY7 297 aa11.27□□□□□ -0.61
TMEM116-208ENST00000549537 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
TMEM116-208ENST00000549537 UACAQ9BZF9 1416 aa11.25□□□□□ -0.61
TMEM116-208ENST00000549537 EEA1Q15075 1411 aa11.23□□□□□ -0.61
TMEM116-208ENST00000549537 KDM5BQ9UGL1 1544 aa11.23□□□□□ -0.61
TMEM116-208ENST00000549537 GOLGA3Q08378 1498 aa11.22□□□□□ -0.61
TMEM116-208ENST00000549537 FAM69CQ0P6D2 419 aa11.22□□□□□ -0.61
TMEM116-208ENST00000549537 TTBK1Q5TCY1 1321 aaPredicted RBP11.22□□□□□ -0.61
TMEM116-208ENST00000549537 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
TMEM116-208ENST00000549537 SCUBE2Q9NQ36 999 aa11.22□□□□□ -0.61
TMEM116-208ENST00000549537 POTEMA6NI47 508 aa11.21□□□□□ -0.61
TMEM116-208ENST00000549537 TIE1P35590 1138 aa11.21□□□□□ -0.61
TMEM116-208ENST00000549537 ATN1P54259 1190 aaPredicted RBP11.21□□□□□ -0.61
TMEM116-208ENST00000549537 ASXL2Q76L83 1435 aa11.2□□□□□ -0.62
TMEM116-208ENST00000549537 ZCCHC11Q5TAX3 1644 aaKnown RBP11.2□□□□□ -0.62
TMEM116-208ENST00000549537 ABCA8O94911 1581 aa11.2□□□□□ -0.62
TMEM116-208ENST00000549537 PLB1Q6P1J6 1458 aa11.19□□□□□ -0.62
TMEM116-208ENST00000549537 PCDH10Q9P2E7 1040 aa11.19□□□□□ -0.62
TMEM116-208ENST00000549537 GLI2P10070 1586 aa11.19□□□□□ -0.62
TMEM116-208ENST00000549537 TSPOAP1O95153 1857 aa11.19□□□□□ -0.62
TMEM116-208ENST00000549537 KDM4FA0A1W2PPD8 638 aa11.18□□□□□ -0.62
TMEM116-208ENST00000549537 MAP3K13O43283 966 aa11.18□□□□□ -0.62
TMEM116-208ENST00000549537 SGIP1Q9BQI5 828 aa11.18□□□□□ -0.62
TMEM116-208ENST00000549537 SAMD9Q5K651 1589 aa11.18□□□□□ -0.62
TMEM116-208ENST00000549537 KDM6BO15054 1643 aa11.17□□□□□ -0.62
TMEM116-208ENST00000549537 RASEFQ8IZ41 740 aa11.17□□□□□ -0.62
TMEM116-208ENST00000549537 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
TMEM116-208ENST00000549537 PPRC1Q5VV67 1664 aaKnown RBP11.17□□□□□ -0.62
TMEM116-208ENST00000549537 KIF21BO75037 1637 aa11.17□□□□□ -0.62
TMEM116-208ENST00000549537 POTEGQ6S5H5 508 aa11.16□□□□□ -0.62
TMEM116-208ENST00000549537 EPRSP07814 1512 aaKnown RBP11.15□□□□□ -0.62
TMEM116-208ENST00000549537 MAP3K4Q9Y6R4 1608 aa11.13□□□□□ -0.63
TMEM116-208ENST00000549537 FKBP8Q14318 412 aa11.13□□□□□ -0.63
TMEM116-208ENST00000549537 WDR7Q9Y4E6 1490 aa11.12□□□□□ -0.63
TMEM116-208ENST00000549537 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
TMEM116-208ENST00000549537 SEC24BO95487 1268 aa11.11□□□□□ -0.63
TMEM116-208ENST00000549537 ILDR1Q86SU0 546 aaPredicted RBP11.11□□□□□ -0.63
TMEM116-208ENST00000549537 FAM9AQ8IZU1 332 aaPredicted RBP11.11□□□□□ -0.63
TMEM116-208ENST00000549537 IER5LQ5T953 404 aa11.09□□□□□ -0.63
TMEM116-208ENST00000549537 P3H3Q8IVL6 736 aa11.09□□□□□ -0.63
TMEM116-208ENST00000549537 ATP10BO94823 1461 aa11.08□□□□□ -0.64
TMEM116-208ENST00000549537 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
TMEM116-208ENST00000549537 TRPC6Q9Y210 931 aa11.08□□□□□ -0.64
TMEM116-208ENST00000549537 PCDHB13Q9Y5F0 798 aa11.08□□□□□ -0.64
TMEM116-208ENST00000549537 RAPGEF6Q8TEU7 1601 aa11.08□□□□□ -0.64
TMEM116-208ENST00000549537 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
TMEM116-208ENST00000549537 EFCAB5A4FU69 1503 aa11.07□□□□□ -0.64
TMEM116-208ENST00000549537 CFAP43Q8NDM7 1665 aa11.06□□□□□ -0.64
TMEM116-208ENST00000549537 FHOD3Q2V2M9 1422 aa11.06□□□□□ -0.64
TMEM116-208ENST00000549537 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
TMEM116-208ENST00000549537 COL17A1Q9UMD9 1497 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-208ENST00000549537 TEX14Q8IWB6 1497 aa11.05□□□□□ -0.64
TMEM116-208ENST00000549537 POTEFA5A3E0 1075 aa11.04□□□□□ -0.64
TMEM116-208ENST00000549537 NUBP1P53384 320 aa11.04□□□□□ -0.64
TMEM116-208ENST00000549537 FAM163AQ96GL9 167 aaPredicted RBP11.04□□□□□ -0.64
TMEM116-208ENST00000549537 MAGI3Q5TCQ9 1506 aa11.04□□□□□ -0.64
TMEM116-208ENST00000549537 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
TMEM116-208ENST00000549537 RTN4Q9NQC3 1192 aaKnown RBP11.02□□□□□ -0.65
TMEM116-208ENST00000549537 ABCA9Q8IUA7 1624 aa11.02□□□□□ -0.65
TMEM116-208ENST00000549537 CD109Q6YHK3 1445 aa11.01□□□□□ -0.65
TMEM116-208ENST00000549537 ADGRL1O94910 1474 aa11.01□□□□□ -0.65
TMEM116-208ENST00000549537 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
TMEM116-208ENST00000549537 RANGAP1P46060 587 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-208ENST00000549537 KCNH8Q96L42 1107 aa11.01□□□□□ -0.65
TMEM116-208ENST00000549537 ARHGAP35Q9NRY4 1499 aa11□□□□□ -0.65
TMEM116-208ENST00000549537 HECW2Q9P2P5 1572 aa10.99□□□□□ -0.65
TMEM116-208ENST00000549537 COLQQ9Y215 455 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-208ENST00000549537 UBTFP17480 764 aaKnown RBP10.97□□□□□ -0.65
TMEM116-208ENST00000549537 IFNL1Q8IU54 200 aa10.97□□□□□ -0.65
TMEM116-208ENST00000549537 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
TMEM116-208ENST00000549537 ARAP3Q8WWN8 1544 aa10.95□□□□□ -0.66
TMEM116-208ENST00000549537 TMEM106CQ9BVX2 250 aa10.95□□□□□ -0.66
TMEM116-208ENST00000549537 CDK13Q14004 1512 aaKnown RBP10.94□□□□□ -0.66
TMEM116-208ENST00000549537 FMN1Q68DA7 1419 aa10.94□□□□□ -0.66
TMEM116-208ENST00000549537 PLCG2P16885 1265 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms