RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
SCAF11-211ENST00000547950 ZBTB22O15209 634 aa10.97□□□□□ -0.65
SCAF11-211ENST00000547950 KIF21BO75037 1637 aa10.97□□□□□ -0.65
SCAF11-211ENST00000547950 RAPGEF6Q8TEU7 1601 aa10.97□□□□□ -0.65
SCAF11-211ENST00000547950 ADGRL1O94910 1474 aa10.96□□□□□ -0.65
SCAF11-211ENST00000547950 PHLDB1Q86UU1 1377 aa10.96□□□□□ -0.65
SCAF11-211ENST00000547950 CFAP43Q8NDM7 1665 aa10.95□□□□□ -0.66
SCAF11-211ENST00000547950 EFCAB5A4FU69 1503 aa10.94□□□□□ -0.66
SCAF11-211ENST00000547950 POTEHQ6S545 545 aa10.94□□□□□ -0.66
SCAF11-211ENST00000547950 CDK11AQ9UQ88 783 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-211ENST00000547950 ARAP3Q8WWN8 1544 aa10.93□□□□□ -0.66
SCAF11-211ENST00000547950 ARHGAP35Q9NRY4 1499 aa10.92□□□□□ -0.66
SCAF11-211ENST00000547950 FMN1Q68DA7 1419 aa10.92□□□□□ -0.66
SCAF11-211ENST00000547950 ARID4BQ4LE39 1312 aaPredicted RBP10.91□□□□□ -0.66
SCAF11-211ENST00000547950 ABCA9Q8IUA7 1624 aa10.91□□□□□ -0.66
SCAF11-211ENST00000547950 NEO1Q92859 1461 aa10.9□□□□□ -0.66
SCAF11-211ENST00000547950 CDK13Q14004 1512 aaKnown RBP10.89□□□□□ -0.67
SCAF11-211ENST00000547950 AKNAQ7Z591 1439 aa10.89□□□□□ -0.67
SCAF11-211ENST00000547950 FANCAO15360 1455 aa10.87□□□□□ -0.67
SCAF11-211ENST00000547950 EFCAB2Q5VUJ9 269 aa10.87□□□□□ -0.67
SCAF11-211ENST00000547950 RBM42Q9BTD8 480 aaKnown RBP10.87□□□□□ -0.67
SCAF11-211ENST00000547950 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.86□□□□□ -0.67
SCAF11-211ENST00000547950 DENND4BO75064 1496 aaPredicted RBP10.86□□□□□ -0.67
SCAF11-211ENST00000547950 PLCH2O75038 1416 aa10.85□□□□□ -0.67
SCAF11-211ENST00000547950 SCAPERQ9BY12 1400 aa10.84□□□□□ -0.67
SCAF11-211ENST00000547950 MLECQ14165 292 aa10.83□□□□□ -0.68
SCAF11-211ENST00000547950 MYT1LQ9UL68 1186 aa10.83□□□□□ -0.68
SCAF11-211ENST00000547950 TROQ12816 1431 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-211ENST00000547950 HECW1Q76N89 1606 aa10.81□□□□□ -0.68
SCAF11-211ENST00000547950 AFAP1Q8N556 730 aa10.81□□□□□ -0.68
SCAF11-211ENST00000547950 CLIP1P30622 1438 aa10.81□□□□□ -0.68
SCAF11-211ENST00000547950 TTC37Q6PGP7 1564 aa10.81□□□□□ -0.68
SCAF11-211ENST00000547950 CASKIN1Q8WXD9 1431 aa10.8□□□□□ -0.68
SCAF11-211ENST00000547950 YEATS2Q9ULM3 1422 aa10.79□□□□□ -0.68
SCAF11-211ENST00000547950 FRMPD1Q5SYB0 1578 aa10.78□□□□□ -0.68
SCAF11-211ENST00000547950 ZNF777Q9ULD5 760 aaPredicted RBP10.78□□□□□ -0.68
SCAF11-211ENST00000547950 PTPRMP28827 1452 aa10.78□□□□□ -0.68
SCAF11-211ENST00000547950 POGZQ7Z3K3 1410 aa10.76□□□□□ -0.69
SCAF11-211ENST00000547950 ZBTB12Q9Y330 459 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-211ENST00000547950 MAGI2Q86UL8 1455 aa10.75□□□□□ -0.69
SCAF11-211ENST00000547950 ARHGAP5Q13017 1502 aa10.75□□□□□ -0.69
SCAF11-211ENST00000547950 CFAP74Q9C0B2 1584 aa10.75□□□□□ -0.69
SCAF11-211ENST00000547950 HECW2Q9P2P5 1572 aa10.75□□□□□ -0.69
SCAF11-211ENST00000547950 LOC105371045A0A1W2PR82 267 aa10.75□□□□□ -0.69
SCAF11-211ENST00000547950 KIF14Q15058 1648 aa10.75□□□□□ -0.69
SCAF11-211ENST00000547950 ATXN8OSP0DMR3 200 aa10.74□□□□□ -0.69
SCAF11-211ENST00000547950 CCDC18Q5T9S5 1454 aa10.74□□□□□ -0.69
SCAF11-211ENST00000547950 ZFYVE16Q7Z3T8 1539 aa10.74□□□□□ -0.69
SCAF11-211ENST00000547950 ILDR1Q86SU0 546 aaPredicted RBP10.73□□□□□ -0.69
SCAF11-211ENST00000547950 ATP10AO60312 1499 aa10.73□□□□□ -0.69
SCAF11-211ENST00000547950 PCF11O94913 1555 aaKnown RBP10.73□□□□□ -0.69
SCAF11-211ENST00000547950 HNRNPMP52272 730 aaKnown RBP eCLIP10.72□□□□□ -0.69
SCAF11-211ENST00000547950 CFDP1Q9UEE9 299 aaPredicted RBP10.72□□□□□ -0.69
SCAF11-211ENST00000547950 FYCO1Q9BQS8 1478 aa10.72□□□□□ -0.69
SCAF11-211ENST00000547950 ARHGEF40Q8TER5 1519 aa10.72□□□□□ -0.69
SCAF11-211ENST00000547950 RICTORQ6R327 1708 aa10.72□□□□□ -0.69
SCAF11-211ENST00000547950 CEBPAP49715 358 aaPredicted RBP10.71□□□□□ -0.69
SCAF11-211ENST00000547950 ADAMTSL3P82987 1691 aa10.71□□□□□ -0.69
SCAF11-211ENST00000547950 ZMYM4Q5VZL5 1548 aa10.71□□□□□ -0.69
SCAF11-211ENST00000547950 ZNF518AQ6AHZ1 1483 aa10.71□□□□□ -0.69
SCAF11-211ENST00000547950 TRAPPC8Q9Y2L5 1435 aa10.7□□□□□ -0.7
SCAF11-211ENST00000547950 HSPA2P54652 639 aa10.7□□□□□ -0.7
SCAF11-211ENST00000547950 BCORL1Q5H9F3 1711 aa10.7□□□□□ -0.7
SCAF11-211ENST00000547950 MADDQ8WXG6 1647 aa10.69□□□□□ -0.7
SCAF11-211ENST00000547950 C9orf84Q5VXU9 1444 aa10.69□□□□□ -0.7
SCAF11-211ENST00000547950 MTUS2Q5JR59 1369 aa10.69□□□□□ -0.7
SCAF11-211ENST00000547950 CCNB3Q8WWL7 1395 aa10.69□□□□□ -0.7
SCAF11-211ENST00000547950 ESF1Q9H501 851 aaKnown RBP10.69□□□□□ -0.7
SCAF11-211ENST00000547950 CEP162Q5TB80 1403 aa10.68□□□□□ -0.7
SCAF11-211ENST00000547950 MYO5CQ9NQX4 1742 aa10.68□□□□□ -0.7
SCAF11-211ENST00000547950 ARHGEF12Q9NZN5 1544 aa10.68□□□□□ -0.7
SCAF11-211ENST00000547950 GPATCH8Q9UKJ3 1502 aaKnown RBP10.68□□□□□ -0.7
SCAF11-211ENST00000547950 LRRIQ1Q96JM4 1722 aa10.67□□□□□ -0.7
SCAF11-211ENST00000547950 SPAG9O60271 1321 aaKnown RBP10.67□□□□□ -0.7
SCAF11-211ENST00000547950 ZNF644Q9H582 1327 aaPredicted RBP10.66□□□□□ -0.7
SCAF11-211ENST00000547950 MLH3Q9UHC1 1453 aa10.66□□□□□ -0.7
SCAF11-211ENST00000547950 LMTK3Q96Q04 1460 aa10.64□□□□□ -0.71
SCAF11-211ENST00000547950 SIGLEC1Q9BZZ2 1709 aa10.64□□□□□ -0.71
SCAF11-211ENST00000547950 RIMS1Q86UR5 1692 aaKnown RBP10.63□□□□□ -0.71
SCAF11-211ENST00000547950 CHRDL2Q6WN34 429 aa10.63□□□□□ -0.71
SCAF11-211ENST00000547950 KDM5CP41229 1560 aa10.63□□□□□ -0.71
SCAF11-211ENST00000547950 ABCC1P33527 1531 aa10.63□□□□□ -0.71
SCAF11-211ENST00000547950 CDC42BPBQ9Y5S2 1711 aa10.62□□□□□ -0.71
SCAF11-211ENST00000547950 AKT1S1Q96B36 256 aa10.62□□□□□ -0.71
SCAF11-211ENST00000547950 PREX2Q70Z35 1606 aa10.62□□□□□ -0.71
SCAF11-211ENST00000547950 KIAA1107Q9UPP5 1409 aa10.61□□□□□ -0.71
SCAF11-211ENST00000547950 GGT6Q6P531 493 aa10.61□□□□□ -0.71
SCAF11-211ENST00000547950 DIP2CQ9Y2E4 1556 aa10.6□□□□□ -0.71
SCAF11-211ENST00000547950 PLEKHH2Q8IVE3 1493 aa10.6□□□□□ -0.71
SCAF11-211ENST00000547950 SYCP2Q9BX26 1530 aa10.59□□□□□ -0.71
SCAF11-211ENST00000547950 SAMD9LQ8IVG5 1584 aa10.59□□□□□ -0.71
SCAF11-211ENST00000547950 KANK4Q5T7N3 995 aaPredicted RBP10.58□□□□□ -0.72
SCAF11-211ENST00000547950 FBXO41Q8TF61 875 aa10.57□□□□□ -0.72
SCAF11-211ENST00000547950 CDC42BPAQ5VT25 1732 aa10.57□□□□□ -0.72
SCAF11-211ENST00000547950 ABCA6Q8N139 1617 aa10.57□□□□□ -0.72
SCAF11-211ENST00000547950 AGLP35573 1532 aa10.57□□□□□ -0.72
SCAF11-211ENST00000547950 ZMYM3Q14202 1370 aa10.56□□□□□ -0.72
SCAF11-211ENST00000547950 TSPY4P0CV99 314 aa10.56□□□□□ -0.72
SCAF11-211ENST00000547950 TSPY10P0CW01 314 aa10.56□□□□□ -0.72
SCAF11-211ENST00000547950 RSPH4AQ5TD94 716 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms