RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 GAPVD1Q14C86 1478 aa15.62■□□□□ 0.09
CHERP-203ENST00000546361 FGD5Q6ZNL6 1462 aa15.62■□□□□ 0.09
CHERP-203ENST00000546361 WASHC2CQ9Y4E1 1318 aa15.62■□□□□ 0.09
CHERP-203ENST00000546361 SOX12O15370 315 aa15.62■□□□□ 0.09
CHERP-203ENST00000546361 HSP90AA1P07900 732 aaKnown RBP15.61■□□□□ 0.09
CHERP-203ENST00000546361 ARXQ96QS3 562 aa15.61■□□□□ 0.09
CHERP-203ENST00000546361 RAB3GAP2Q9H2M9 1393 aa15.61■□□□□ 0.09
CHERP-203ENST00000546361 MAPK8IP3Q9UPT6 1336 aa15.6■□□□□ 0.09
CHERP-203ENST00000546361 U2SURPO15042 1029 aaKnown RBP15.6■□□□□ 0.09
CHERP-203ENST00000546361 CCDC18Q5T9S5 1454 aa15.6■□□□□ 0.09
CHERP-203ENST00000546361 MYH16Q9H6N6 1097 aa15.58■□□□□ 0.09
CHERP-203ENST00000546361 AQRO60306 1485 aaKnown RBP eCLIP15.57■□□□□ 0.083e-7■■■■□ 22.2
CHERP-203ENST00000546361 LAS1LQ9Y4W2 734 aaKnown RBP15.57■□□□□ 0.08
CHERP-203ENST00000546361 HSPA5P11021 654 aaKnown RBP15.55■□□□□ 0.08
CHERP-203ENST00000546361 MORC1Q86VD1 984 aa15.52■□□□□ 0.08
CHERP-203ENST00000546361 NUTM2DQ5VT03 806 aaPredicted RBP15.52■□□□□ 0.08
CHERP-203ENST00000546361 L3MBTL2Q969R5 705 aa15.52■□□□□ 0.08
CHERP-203ENST00000546361 TOP2BQ02880 1626 aa15.51■□□□□ 0.07
CHERP-203ENST00000546361 EID1Q9Y6B2 187 aa15.5■□□□□ 0.07
CHERP-203ENST00000546361 CUX1P39880 1505 aa15.5■□□□□ 0.07
CHERP-203ENST00000546361 FAM69CQ0P6D2 419 aa15.49■□□□□ 0.07
CHERP-203ENST00000546361 HDGFL2Q7Z4V5 671 aaPredicted RBP15.49■□□□□ 0.07
CHERP-203ENST00000546361 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
CHERP-203ENST00000546361 ROCK2O75116 1388 aaKnown RBP15.47■□□□□ 0.07
CHERP-203ENST00000546361 FTSJ3Q8IY81 847 aaKnown RBP15.46■□□□□ 0.07
CHERP-203ENST00000546361 SUPT16HQ9Y5B9 1047 aaKnown RBP15.46■□□□□ 0.07
CHERP-203ENST00000546361 PNNQ9H307 717 aaKnown RBP15.45■□□□□ 0.06
CHERP-203ENST00000546361 FRAT1Q92837 279 aaPredicted RBP15.44■□□□□ 0.06
CHERP-203ENST00000546361 NUTM2FA1L443 756 aa15.41■□□□□ 0.06
CHERP-203ENST00000546361 TRAK1Q9UPV9 953 aa15.41■□□□□ 0.06
CHERP-203ENST00000546361 ZNF644Q9H582 1327 aaPredicted RBP15.4■□□□□ 0.06
CHERP-203ENST00000546361 MRC2Q9UBG0 1479 aa15.4■□□□□ 0.06
CHERP-203ENST00000546361 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
CHERP-203ENST00000546361 KIF21BO75037 1637 aa15.38■□□□□ 0.05
CHERP-203ENST00000546361 NGDNQ8NEJ9 315 aaKnown RBP15.38■□□□□ 0.05
CHERP-203ENST00000546361 U2AF1L5P0DN76 240 aaPredicted RBP15.37■□□□□ 0.05
CHERP-203ENST00000546361 U2AF1Q01081 240 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHERP-203ENST00000546361 NPHP1O15259 732 aa15.37■□□□□ 0.05
CHERP-203ENST00000546361 TERF2IPQ9NYB0 399 aa15.36■□□□□ 0.05
CHERP-203ENST00000546361 VGFO15240 615 aaPredicted RBP15.36■□□□□ 0.05
CHERP-203ENST00000546361 CSB-PGBD3P0DP91 1061 aa15.36■□□□□ 0.05
CHERP-203ENST00000546361 KTN1Q86UP2 1357 aaKnown RBP15.35■□□□□ 0.05
CHERP-203ENST00000546361 CCDC144AA2RUR9 1427 aa15.35■□□□□ 0.05
CHERP-203ENST00000546361 RTF1Q92541 710 aaKnown RBP15.35■□□□□ 0.05
CHERP-203ENST00000546361 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
CHERP-203ENST00000546361 LAMC3Q9Y6N6 1575 aa15.34■□□□□ 0.05
CHERP-203ENST00000546361 AFAP1Q8N556 730 aa15.33■□□□□ 0.04
CHERP-203ENST00000546361 EIF3AQ14152 1382 aaKnown RBP15.33■□□□□ 0.04
CHERP-203ENST00000546361 ST20-MTHFSA0A0A6YYL1 179 aa15.32■□□□□ 0.04
CHERP-203ENST00000546361 PRXQ9BXM0 1461 aa15.32■□□□□ 0.04
CHERP-203ENST00000546361 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
CHERP-203ENST00000546361 CCER2I3L3R5 266 aa15.31■□□□□ 0.04
CHERP-203ENST00000546361 MYOM3Q5VTT5 1437 aa15.31■□□□□ 0.04
CHERP-203ENST00000546361 PRG4Q92954 1404 aaPredicted RBP15.3■□□□□ 0.04
CHERP-203ENST00000546361 MS4A1P11836 297 aa15.3■□□□□ 0.04
CHERP-203ENST00000546361 RALBP1Q15311 655 aa15.29■□□□□ 0.04
CHERP-203ENST00000546361 CHMP4BQ9H444 224 aaKnown RBP15.29■□□□□ 0.04
CHERP-203ENST00000546361 POLA1P09884 1462 aaPredicted RBP15.28■□□□□ 0.04
CHERP-203ENST00000546361 ERICH3Q5RHP9 1530 aa15.28■□□□□ 0.04
CHERP-203ENST00000546361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.27■□□□□ 0.04
CHERP-203ENST00000546361 RGS3P49796 1198 aa15.27■□□□□ 0.03
CHERP-203ENST00000546361 IFT140Q96RY7 1462 aa15.27■□□□□ 0.03
CHERP-203ENST00000546361 DNMBPQ6XZF7 1577 aa15.27■□□□□ 0.03
CHERP-203ENST00000546361 ANP32BQ92688 251 aaKnown RBP15.26■□□□□ 0.03
CHERP-203ENST00000546361 KIF15Q9NS87 1388 aa15.26■□□□□ 0.03
CHERP-203ENST00000546361 OS9Q13438 667 aaPredicted RBP15.26■□□□□ 0.03
CHERP-203ENST00000546361 CCDC9Q9Y3X0 531 aaKnown RBP15.25■□□□□ 0.03
CHERP-203ENST00000546361 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
CHERP-203ENST00000546361 AMPHP49418 695 aa15.24■□□□□ 0.03
CHERP-203ENST00000546361 FGD6Q6ZV73 1430 aa15.24■□□□□ 0.03
CHERP-203ENST00000546361 LTV1Q96GA3 475 aaPredicted RBP15.23■□□□□ 0.03
CHERP-203ENST00000546361 PHLDB1Q86UU1 1377 aa15.23■□□□□ 0.03
CHERP-203ENST00000546361 MINK1Q8N4C8 1332 aaPredicted RBP15.22■□□□□ 0.03
CHERP-203ENST00000546361 NLRP13Q86W25 1043 aa15.22■□□□□ 0.03
CHERP-203ENST00000546361 PPP4R2Q9NY27 417 aa15.22■□□□□ 0.03
CHERP-203ENST00000546361 UACAQ9BZF9 1416 aa15.22■□□□□ 0.03
CHERP-203ENST00000546361 ZNF330Q9Y3S2 320 aaPredicted RBP15.21■□□□□ 0.03
CHERP-203ENST00000546361 CALD1Q05682 793 aaKnown RBP15.2■□□□□ 0.02
CHERP-203ENST00000546361 PANK3Q9H999 370 aa15.2■□□□□ 0.02
CHERP-203ENST00000546361 CASKIN1Q8WXD9 1431 aa15.2■□□□□ 0.02
CHERP-203ENST00000546361 CASC1Q6TDU7 716 aa15.2■□□□□ 0.02
CHERP-203ENST00000546361 SYNJ2O15056 1496 aa15.19■□□□□ 0.02
CHERP-203ENST00000546361 B4GALNT3Q6L9W6 998 aa15.19■□□□□ 0.02
CHERP-203ENST00000546361 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
CHERP-203ENST00000546361 ANKRD50Q9ULJ7 1429 aa15.18■□□□□ 0.02
CHERP-203ENST00000546361 EVC2Q86UK5 1308 aa15.18■□□□□ 0.02
CHERP-203ENST00000546361 BECN1Q14457 450 aa15.18■□□□□ 0.02
CHERP-203ENST00000546361 IPO8O15397 1037 aaKnown RBP15.17■□□□□ 0.02
CHERP-203ENST00000546361 LRRC9Q6ZRR7 1453 aa15.17■□□□□ 0.02
CHERP-203ENST00000546361 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
CHERP-203ENST00000546361 ARAP1Q96P48 1450 aa15.16■□□□□ 0.02
CHERP-203ENST00000546361 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
CHERP-203ENST00000546361 NBR1Q14596 966 aa15.16■□□□□ 0.02
CHERP-203ENST00000546361 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
CHERP-203ENST00000546361 GOLGA2Q08379 1002 aa15.16■□□□□ 0.02
CHERP-203ENST00000546361 NCOA2Q15596 1464 aa15.15■□□□□ 0.02
CHERP-203ENST00000546361 CCDC146Q8IYE0 955 aa15.14■□□□□ 0.01
CHERP-203ENST00000546361 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHERP-203ENST00000546361 RAPGEF3O95398 923 aa15.13■□□□□ 0.01
CHERP-203ENST00000546361 COG3Q96JB2 828 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 346.4 ms