RNA–Protein interactions for RNA: ENST00000545681.2

UBE2L3-204, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-204ENST00000545681 ABCC5O15440 1437 aa18.22■□□□□ 0.51
UBE2L3-204ENST00000545681 NEFLP07196 543 aa18.2■□□□□ 0.5
UBE2L3-204ENST00000545681 TSHZ2Q9NRE2 1034 aa18.2■□□□□ 0.5
UBE2L3-204ENST00000545681 ROCK1Q13464 1354 aa18.19■□□□□ 0.5
UBE2L3-204ENST00000545681 FBLN2P98095 1184 aa18.19■□□□□ 0.5
UBE2L3-204ENST00000545681 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
UBE2L3-204ENST00000545681 RAPGEF6Q8TEU7 1601 aa18.18■□□□□ 0.5
UBE2L3-204ENST00000545681 EIF4G3O43432 1585 aaKnown RBP18.18■□□□□ 0.5
UBE2L3-204ENST00000545681 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
UBE2L3-204ENST00000545681 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
UBE2L3-204ENST00000545681 DNMT1P26358 1616 aaKnown RBP18.16■□□□□ 0.5
UBE2L3-204ENST00000545681 ANKRD30BQ9BXX2 1392 aa18.16■□□□□ 0.5
UBE2L3-204ENST00000545681 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
UBE2L3-204ENST00000545681 ZNF777Q9ULD5 760 aaPredicted RBP18.15■□□□□ 0.5
UBE2L3-204ENST00000545681 ERCC6Q03468 1493 aa18.15■□□□□ 0.5
UBE2L3-204ENST00000545681 HNRNPUQ00839 825 aaKnown RBP eCLIP18.14■□□□□ 0.49
UBE2L3-204ENST00000545681 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.49
UBE2L3-204ENST00000545681 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
UBE2L3-204ENST00000545681 TROQ12816 1431 aaPredicted RBP18.13■□□□□ 0.49
UBE2L3-204ENST00000545681 C11orf95C9JLR9 678 aaPredicted RBP18.12■□□□□ 0.49
UBE2L3-204ENST00000545681 RPRD2Q5VT52 1461 aaKnown RBP18.12■□□□□ 0.49
UBE2L3-204ENST00000545681 CAMSAP2Q08AD1 1489 aa18.09■□□□□ 0.49
UBE2L3-204ENST00000545681 MAGI1Q96QZ7 1491 aaPredicted RBP18.09■□□□□ 0.49
UBE2L3-204ENST00000545681 CNTLNQ9NXG0 1405 aa18.09■□□□□ 0.49
UBE2L3-204ENST00000545681 CEP170Q5SW79 1584 aa18.08■□□□□ 0.49
UBE2L3-204ENST00000545681 TEX14Q8IWB6 1497 aa18.08■□□□□ 0.48
UBE2L3-204ENST00000545681 MYT1Q01538 1121 aa18.08■□□□□ 0.48
UBE2L3-204ENST00000545681 CCDC7Q96M83 1385 aa18.08■□□□□ 0.48
UBE2L3-204ENST00000545681 JPH4Q96JJ6 628 aa18.07■□□□□ 0.48
UBE2L3-204ENST00000545681 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
UBE2L3-204ENST00000545681 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
UBE2L3-204ENST00000545681 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
UBE2L3-204ENST00000545681 CCDC184Q52MB2 194 aa18.06■□□□□ 0.48
UBE2L3-204ENST00000545681 CARMIL2Q6F5E8 1435 aa18.05■□□□□ 0.48
UBE2L3-204ENST00000545681 KIF14Q15058 1648 aa18.04■□□□□ 0.48
UBE2L3-204ENST00000545681 PZPP20742 1482 aa18.04■□□□□ 0.48
UBE2L3-204ENST00000545681 PRKRIP1Q9H875 184 aaPredicted RBP18.02■□□□□ 0.48
UBE2L3-204ENST00000545681 ZNF326Q5BKZ1 582 aaKnown RBP18.02■□□□□ 0.47
UBE2L3-204ENST00000545681 ITSN2Q9NZM3 1697 aa18.01■□□□□ 0.47
UBE2L3-204ENST00000545681 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
UBE2L3-204ENST00000545681 PLEKHD1A6NEE1 506 aa18■□□□□ 0.47
UBE2L3-204ENST00000545681 PKD2Q13563 968 aa18■□□□□ 0.47
UBE2L3-204ENST00000545681 FAM9BQ8IZU0 186 aa17.99■□□□□ 0.47
UBE2L3-204ENST00000545681 ANKRD30AQ9BXX3 1397 aa17.99■□□□□ 0.47
UBE2L3-204ENST00000545681 NUP160Q12769 1436 aa17.99■□□□□ 0.47
UBE2L3-204ENST00000545681 IRX6P78412 446 aaPredicted RBP17.99■□□□□ 0.47
UBE2L3-204ENST00000545681 MRS2Q9HD23 443 aa17.99■□□□□ 0.47
UBE2L3-204ENST00000545681 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
UBE2L3-204ENST00000545681 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
UBE2L3-204ENST00000545681 ADGRL2O95490 1459 aa17.97■□□□□ 0.47
UBE2L3-204ENST00000545681 ANKRD50Q9ULJ7 1429 aa17.96■□□□□ 0.47
UBE2L3-204ENST00000545681 ADCY10Q96PN6 1610 aa17.96■□□□□ 0.47
UBE2L3-204ENST00000545681 POLR3GLQ9BT43 218 aa17.96■□□□□ 0.47
UBE2L3-204ENST00000545681 ADGBQ8N7X0 1667 aa17.96■□□□□ 0.47
UBE2L3-204ENST00000545681 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
UBE2L3-204ENST00000545681 ATP10BO94823 1461 aa17.92■□□□□ 0.46
UBE2L3-204ENST00000545681 NUP155O75694 1391 aa17.92■□□□□ 0.46
UBE2L3-204ENST00000545681 CROCC2H7BZ55 1655 aa17.92■□□□□ 0.46
UBE2L3-204ENST00000545681 TSPY4P0CV99 314 aa17.91■□□□□ 0.46
UBE2L3-204ENST00000545681 TSPY10P0CW01 314 aa17.91■□□□□ 0.46
UBE2L3-204ENST00000545681 USP47Q96K76 1375 aa17.91■□□□□ 0.46
UBE2L3-204ENST00000545681 C9orf84Q5VXU9 1444 aa17.9■□□□□ 0.46
UBE2L3-204ENST00000545681 MBD5Q9P267 1494 aa17.9■□□□□ 0.46
UBE2L3-204ENST00000545681 ABCA8O94911 1581 aa17.9■□□□□ 0.46
UBE2L3-204ENST00000545681 ABCC10Q5T3U5 1492 aa17.89■□□□□ 0.45
UBE2L3-204ENST00000545681 HNRNPMP52272 730 aaKnown RBP eCLIP17.89■□□□□ 0.453e-7■■■■□ 23.5
UBE2L3-204ENST00000545681 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
UBE2L3-204ENST00000545681 CDC42BPAQ5VT25 1732 aa17.87■□□□□ 0.45
UBE2L3-204ENST00000545681 KDM2AQ9Y2K7 1162 aa17.85■□□□□ 0.45
UBE2L3-204ENST00000545681 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
UBE2L3-204ENST00000545681 SHANK2Q9UPX8 1470 aa17.84■□□□□ 0.45
UBE2L3-204ENST00000545681 KIF15Q9NS87 1388 aa17.84■□□□□ 0.45
UBE2L3-204ENST00000545681 POLR1AO95602 1720 aaPredicted RBP17.83■□□□□ 0.44
UBE2L3-204ENST00000545681 CARD11Q9BXL7 1154 aa17.83■□□□□ 0.44
UBE2L3-204ENST00000545681 PTPRGP23470 1445 aa17.83■□□□□ 0.44
UBE2L3-204ENST00000545681 DHX29Q7Z478 1369 aaKnown RBP17.82■□□□□ 0.44
UBE2L3-204ENST00000545681 BCORL1Q5H9F3 1711 aa17.82■□□□□ 0.44
UBE2L3-204ENST00000545681 DCAF11Q8TEB1 546 aa17.79■□□□□ 0.44
UBE2L3-204ENST00000545681 KDM5CP41229 1560 aa17.79■□□□□ 0.44
UBE2L3-204ENST00000545681 UHRF1BP1Q6BDS2 1440 aa17.78■□□□□ 0.44
UBE2L3-204ENST00000545681 ANP32EQ9BTT0 268 aa17.78■□□□□ 0.44
UBE2L3-204ENST00000545681 RALGAPBQ86X10 1494 aa17.77■□□□□ 0.44
UBE2L3-204ENST00000545681 PPP4R2Q9NY27 417 aa17.76■□□□□ 0.43
UBE2L3-204ENST00000545681 ARID4BQ4LE39 1312 aaPredicted RBP17.76■□□□□ 0.43
UBE2L3-204ENST00000545681 ST20-MTHFSA0A0A6YYL1 179 aa17.75■□□□□ 0.43
UBE2L3-204ENST00000545681 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
UBE2L3-204ENST00000545681 KDM5DQ9BY66 1539 aa17.75■□□□□ 0.43
UBE2L3-204ENST00000545681 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
UBE2L3-204ENST00000545681 CCDC141Q6ZP82 1450 aa17.74■□□□□ 0.43
UBE2L3-204ENST00000545681 ARHGEF5Q12774 1597 aa17.74■□□□□ 0.43
UBE2L3-204ENST00000545681 ARHGEF12Q9NZN5 1544 aa17.73■□□□□ 0.43
UBE2L3-204ENST00000545681 SAMD9LQ8IVG5 1584 aa17.73■□□□□ 0.43
UBE2L3-204ENST00000545681 ROCK2O75116 1388 aaKnown RBP17.72■□□□□ 0.43
UBE2L3-204ENST00000545681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.432e-11■■■□□ 17.3
UBE2L3-204ENST00000545681 B4GALNT3Q6L9W6 998 aa17.71■□□□□ 0.43
UBE2L3-204ENST00000545681 RGL3Q3MIN7 710 aa17.7■□□□□ 0.42
UBE2L3-204ENST00000545681 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
UBE2L3-204ENST00000545681 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
UBE2L3-204ENST00000545681 FAM135AQ9P2D6 1515 aa17.69■□□□□ 0.42
UBE2L3-204ENST00000545681 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms