RNA–Protein interactions for RNA: ENST00000545681.2

UBE2L3-204, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-204ENST00000545681 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
UBE2L3-204ENST00000545681 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
UBE2L3-204ENST00000545681 CCDC180Q9P1Z9 1646 aa22.89■■□□□ 1.25
UBE2L3-204ENST00000545681 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.24
UBE2L3-204ENST00000545681 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
UBE2L3-204ENST00000545681 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
UBE2L3-204ENST00000545681 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
UBE2L3-204ENST00000545681 CHIC1Q5VXU3 224 aa22■■□□□ 1.11
UBE2L3-204ENST00000545681 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.1
UBE2L3-204ENST00000545681 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
UBE2L3-204ENST00000545681 ABCC9O60706 1549 aa21.52■■□□□ 1.04
UBE2L3-204ENST00000545681 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.01
UBE2L3-204ENST00000545681 LOC105371045A0A1W2PR82 267 aa21.39■■□□□ 1.01
UBE2L3-204ENST00000545681 PCGF6Q9BYE7 350 aa21.35■■□□□ 1.01
UBE2L3-204ENST00000545681 HRCP23327 699 aa21.3■■□□□ 1
UBE2L3-204ENST00000545681 NACADO15069 1562 aa21.21■□□□□ 0.99
UBE2L3-204ENST00000545681 RB1CC1Q8TDY2 1594 aa21.15■□□□□ 0.98
UBE2L3-204ENST00000545681 TRIM41Q8WV44 630 aa21.11■□□□□ 0.97
UBE2L3-204ENST00000545681 CECR2Q9BXF3 1484 aa21.1■□□□□ 0.97
UBE2L3-204ENST00000545681 MROH2BQ7Z745 1585 aa21.01■□□□□ 0.95
UBE2L3-204ENST00000545681 FAM9AQ8IZU1 332 aaPredicted RBP20.99■□□□□ 0.95
UBE2L3-204ENST00000545681 PPARGC1BQ86YN6 1023 aaKnown RBP20.91■□□□□ 0.94
UBE2L3-204ENST00000545681 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
UBE2L3-204ENST00000545681 WIZO95785 1651 aa20.88■□□□□ 0.93
UBE2L3-204ENST00000545681 EHMT2Q96KQ7 1210 aa20.84■□□□□ 0.93
UBE2L3-204ENST00000545681 BAZ1AQ9NRL2 1556 aaPredicted RBP20.73■□□□□ 0.91
UBE2L3-204ENST00000545681 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
UBE2L3-204ENST00000545681 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
UBE2L3-204ENST00000545681 TOP2AP11388 1531 aaKnown RBP20.54■□□□□ 0.88
UBE2L3-204ENST00000545681 UNC13AQ9UPW8 1703 aa20.51■□□□□ 0.87
UBE2L3-204ENST00000545681 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
UBE2L3-204ENST00000545681 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
UBE2L3-204ENST00000545681 ABCC8Q09428 1581 aa20.45■□□□□ 0.86
UBE2L3-204ENST00000545681 SMARCA2P51531 1590 aa20.43■□□□□ 0.86
UBE2L3-204ENST00000545681 ZEB1P37275 1124 aaPredicted RBP20.43■□□□□ 0.86
UBE2L3-204ENST00000545681 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
UBE2L3-204ENST00000545681 SOGA1O94964 1423 aa20.27■□□□□ 0.84
UBE2L3-204ENST00000545681 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
UBE2L3-204ENST00000545681 TTBK1Q5TCY1 1321 aaPredicted RBP20.17■□□□□ 0.82
UBE2L3-204ENST00000545681 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
UBE2L3-204ENST00000545681 CEP162Q5TB80 1403 aa20.16■□□□□ 0.82
UBE2L3-204ENST00000545681 UBTFP17480 764 aaKnown RBP20.13■□□□□ 0.81
UBE2L3-204ENST00000545681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
UBE2L3-204ENST00000545681 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
UBE2L3-204ENST00000545681 EEA1Q15075 1411 aa20.12■□□□□ 0.81
UBE2L3-204ENST00000545681 TNIKQ9UKE5 1360 aa20.12■□□□□ 0.81
UBE2L3-204ENST00000545681 WRNQ14191 1432 aaPredicted RBP eCLIP20.11■□□□□ 0.81
UBE2L3-204ENST00000545681 CCER1Q8TC90 406 aaPredicted RBP20.07■□□□□ 0.8
UBE2L3-204ENST00000545681 ATAD2BQ9ULI0 1458 aa20.06■□□□□ 0.8
UBE2L3-204ENST00000545681 BAZ1BQ9UIG0 1483 aaKnown RBP20.02■□□□□ 0.79
UBE2L3-204ENST00000545681 GOLGA3Q08378 1498 aa20.01■□□□□ 0.79
UBE2L3-204ENST00000545681 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
UBE2L3-204ENST00000545681 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.77
UBE2L3-204ENST00000545681 KIF21BO75037 1637 aa19.82■□□□□ 0.76
UBE2L3-204ENST00000545681 CLIP1P30622 1438 aa19.8■□□□□ 0.76
UBE2L3-204ENST00000545681 RANGAP1P46060 587 aaPredicted RBP19.79■□□□□ 0.76
UBE2L3-204ENST00000545681 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.75
UBE2L3-204ENST00000545681 TOP2BQ02880 1626 aa19.71■□□□□ 0.75
UBE2L3-204ENST00000545681 VPS8Q8N3P4 1428 aa19.7■□□□□ 0.74
UBE2L3-204ENST00000545681 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
UBE2L3-204ENST00000545681 APLP2Q06481 763 aa19.68■□□□□ 0.74
UBE2L3-204ENST00000545681 NCAPD3P42695 1498 aa19.65■□□□□ 0.74
UBE2L3-204ENST00000545681 DIEXFQ68CQ4 756 aaKnown RBP19.64■□□□□ 0.73
UBE2L3-204ENST00000545681 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
UBE2L3-204ENST00000545681 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
UBE2L3-204ENST00000545681 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
UBE2L3-204ENST00000545681 CUX1P39880 1505 aa19.55■□□□□ 0.72
UBE2L3-204ENST00000545681 PRXQ9BXM0 1461 aa19.54■□□□□ 0.72
UBE2L3-204ENST00000545681 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
UBE2L3-204ENST00000545681 CFTRP13569 1480 aa19.5■□□□□ 0.71
UBE2L3-204ENST00000545681 ZNF316A6NFI3 1004 aaPredicted RBP19.49■□□□□ 0.71
UBE2L3-204ENST00000545681 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
UBE2L3-204ENST00000545681 ARAP1Q96P48 1450 aa19.45■□□□□ 0.7
UBE2L3-204ENST00000545681 ACIN1Q9UKV3 1341 aaKnown RBP19.45■□□□□ 0.7
UBE2L3-204ENST00000545681 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
UBE2L3-204ENST00000545681 KANK4Q5T7N3 995 aaPredicted RBP19.4■□□□□ 0.7
UBE2L3-204ENST00000545681 CENPBP07199 599 aaPredicted RBP19.36■□□□□ 0.69
UBE2L3-204ENST00000545681 CUX2O14529 1486 aa19.32■□□□□ 0.68
UBE2L3-204ENST00000545681 CADPSQ9ULU8 1353 aa19.3■□□□□ 0.68
UBE2L3-204ENST00000545681 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
UBE2L3-204ENST00000545681 IGF1RP08069 1367 aa19.27■□□□□ 0.68
UBE2L3-204ENST00000545681 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
UBE2L3-204ENST00000545681 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
UBE2L3-204ENST00000545681 YTHDC1Q96MU7 727 aaKnown RBP19.23■□□□□ 0.67
UBE2L3-204ENST00000545681 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
UBE2L3-204ENST00000545681 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
UBE2L3-204ENST00000545681 MIER1Q8N108 512 aa19.22■□□□□ 0.67
UBE2L3-204ENST00000545681 RRBP1Q9P2E9 1410 aaKnown RBP19.21■□□□□ 0.67
UBE2L3-204ENST00000545681 CARMIL1Q5VZK9 1371 aa19.21■□□□□ 0.67
UBE2L3-204ENST00000545681 ITGAEP38570 1179 aa19.2■□□□□ 0.66
UBE2L3-204ENST00000545681 CCNB3Q8WWL7 1395 aa19.18■□□□□ 0.66
UBE2L3-204ENST00000545681 CLSPNQ9HAW4 1339 aa19.18■□□□□ 0.66
UBE2L3-204ENST00000545681 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
UBE2L3-204ENST00000545681 PELP1Q8IZL8 1130 aaKnown RBP19.13■□□□□ 0.65
UBE2L3-204ENST00000545681 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
UBE2L3-204ENST00000545681 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
UBE2L3-204ENST00000545681 TIAM1Q13009 1591 aa19.06■□□□□ 0.64
UBE2L3-204ENST00000545681 ATP1B4Q9UN42 357 aaPredicted RBP19.06■□□□□ 0.64
UBE2L3-204ENST00000545681 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
UBE2L3-204ENST00000545681 LRRC9Q6ZRR7 1453 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms