RNA–Protein interactions for RNA: ENST00000544244.5

PTPRO-210, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRO, Length 3,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-210ENST00000544244 RIMBP3BA6NNM3 1639 aa8.41□□□□□ -1.06
PTPRO-210ENST00000544244 RIMBP3Q9UFD9 1639 aa8.41□□□□□ -1.06
PTPRO-210ENST00000544244 RSPH4AQ5TD94 716 aa8.41□□□□□ -1.06
PTPRO-210ENST00000544244 CHIC2Q9UKJ5 165 aa8.4□□□□□ -1.06
PTPRO-210ENST00000544244 MYOM3Q5VTT5 1437 aa8.4□□□□□ -1.06
PTPRO-210ENST00000544244 KDM5BQ9UGL1 1544 aa8.4□□□□□ -1.06
PTPRO-210ENST00000544244 WDR7Q9Y4E6 1490 aa8.4□□□□□ -1.07
PTPRO-210ENST00000544244 PHLDB1Q86UU1 1377 aa8.38□□□□□ -1.07
PTPRO-210ENST00000544244 SUPT6HQ7KZ85 1726 aaKnown RBP8.38□□□□□ -1.07
PTPRO-210ENST00000544244 TRIM52Q96A61 297 aa8.38□□□□□ -1.07
PTPRO-210ENST00000544244 KIF14Q15058 1648 aa8.38□□□□□ -1.07
PTPRO-210ENST00000544244 HNRNPMP52272 730 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPRO-210ENST00000544244 CD109Q6YHK3 1445 aa8.37□□□□□ -1.07
PTPRO-210ENST00000544244 FGD6Q6ZV73 1430 aa8.37□□□□□ -1.07
PTPRO-210ENST00000544244 MIA2Q96PC5 1412 aa8.37□□□□□ -1.07
PTPRO-210ENST00000544244 CCER1Q8TC90 406 aaPredicted RBP8.37□□□□□ -1.07
PTPRO-210ENST00000544244 SLC4A2P04920 1241 aa8.37□□□□□ -1.07
PTPRO-210ENST00000544244 ARHGAP5Q13017 1502 aa8.36□□□□□ -1.07
PTPRO-210ENST00000544244 RRP7BPQ9NSQ0 103 aa8.36□□□□□ -1.07
PTPRO-210ENST00000544244 CFAP43Q8NDM7 1665 aa8.36□□□□□ -1.07
PTPRO-210ENST00000544244 PLEKHH2Q8IVE3 1493 aa8.35□□□□□ -1.07
PTPRO-210ENST00000544244 ACIN1Q9UKV3 1341 aaKnown RBP8.35□□□□□ -1.07
PTPRO-210ENST00000544244 SPAG9O60271 1321 aaKnown RBP8.34□□□□□ -1.07
PTPRO-210ENST00000544244 ZNF644Q9H582 1327 aaPredicted RBP8.34□□□□□ -1.07
PTPRO-210ENST00000544244 ZCCHC11Q5TAX3 1644 aaKnown RBP8.34□□□□□ -1.07
PTPRO-210ENST00000544244 ADCY10Q96PN6 1610 aa8.34□□□□□ -1.07
PTPRO-210ENST00000544244 PLCH2O75038 1416 aa8.33□□□□□ -1.08
PTPRO-210ENST00000544244 ANKRD30AQ9BXX3 1397 aa8.32□□□□□ -1.08
PTPRO-210ENST00000544244 GPATCH8Q9UKJ3 1502 aaKnown RBP8.32□□□□□ -1.08
PTPRO-210ENST00000544244 RRBP1Q9P2E9 1410 aaKnown RBP8.32□□□□□ -1.08
PTPRO-210ENST00000544244 ESF1Q9H501 851 aaKnown RBP8.31□□□□□ -1.08
PTPRO-210ENST00000544244 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTPRO-210ENST00000544244 MAGI3Q5TCQ9 1506 aa8.31□□□□□ -1.08
PTPRO-210ENST00000544244 SCAPERQ9BY12 1400 aa8.3□□□□□ -1.08
PTPRO-210ENST00000544244 TEX14Q8IWB6 1497 aa8.3□□□□□ -1.08
PTPRO-210ENST00000544244 FANCAO15360 1455 aa8.3□□□□□ -1.08
PTPRO-210ENST00000544244 AFAP1Q8N556 730 aa8.29□□□□□ -1.08
PTPRO-210ENST00000544244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.29□□□□□ -1.08
PTPRO-210ENST00000544244 PLCB2Q00722 1185 aa8.29□□□□□ -1.08
PTPRO-210ENST00000544244 AKNAQ7Z591 1439 aa8.29□□□□□ -1.08
PTPRO-210ENST00000544244 ARID4BQ4LE39 1312 aaPredicted RBP8.29□□□□□ -1.08
PTPRO-210ENST00000544244 MAPKBP1O60336 1514 aa8.28□□□□□ -1.08
PTPRO-210ENST00000544244 ABCC10Q5T3U5 1492 aa8.28□□□□□ -1.08
PTPRO-210ENST00000544244 ADGRL1O94910 1474 aa8.28□□□□□ -1.08
PTPRO-210ENST00000544244 CAMSAP2Q08AD1 1489 aa8.28□□□□□ -1.08
PTPRO-210ENST00000544244 ITSN2Q9NZM3 1697 aa8.27□□□□□ -1.08
PTPRO-210ENST00000544244 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.27□□□□□ -1.09
PTPRO-210ENST00000544244 SETD5Q9C0A6 1442 aa8.27□□□□□ -1.09
PTPRO-210ENST00000544244 PTPN23Q9H3S7 1636 aa8.27□□□□□ -1.09
PTPRO-210ENST00000544244 RAPGEF3O95398 923 aa8.27□□□□□ -1.09
PTPRO-210ENST00000544244 ZEB1P37275 1124 aaPredicted RBP8.27□□□□□ -1.09
PTPRO-210ENST00000544244 KIAA1107Q9UPP5 1409 aa8.26□□□□□ -1.09
PTPRO-210ENST00000544244 DENND4BO75064 1496 aaPredicted RBP8.26□□□□□ -1.09
PTPRO-210ENST00000544244 CCDC141Q6ZP82 1450 aa8.26□□□□□ -1.09
PTPRO-210ENST00000544244 DAPK1P53355 1430 aa8.26□□□□□ -1.09
PTPRO-210ENST00000544244 C9orf84Q5VXU9 1444 aa8.25□□□□□ -1.09
PTPRO-210ENST00000544244 NEO1Q92859 1461 aa8.25□□□□□ -1.09
PTPRO-210ENST00000544244 KANK1Q14678 1352 aa8.24□□□□□ -1.09
PTPRO-210ENST00000544244 TCOF1Q13428 1488 aaKnown RBP8.24□□□□□ -1.09
PTPRO-210ENST00000544244 KIF3BO15066 747 aa8.24□□□□□ -1.09
PTPRO-210ENST00000544244 ABCC5O15440 1437 aa8.24□□□□□ -1.09
PTPRO-210ENST00000544244 KIF15Q9NS87 1388 aa8.24□□□□□ -1.09
PTPRO-210ENST00000544244 SCAF1Q9H7N4 1312 aaKnown RBP8.23□□□□□ -1.09
PTPRO-210ENST00000544244 HRCP23327 699 aa8.23□□□□□ -1.09
PTPRO-210ENST00000544244 GGT6Q6P531 493 aa8.23□□□□□ -1.09
PTPRO-210ENST00000544244 TTC37Q6PGP7 1564 aa8.23□□□□□ -1.09
PTPRO-210ENST00000544244 LRRIQ1Q96JM4 1722 aa8.22□□□□□ -1.09
PTPRO-210ENST00000544244 HAP1P54257 671 aaPredicted RBP8.22□□□□□ -1.09
PTPRO-210ENST00000544244 MLECQ14165 292 aa8.22□□□□□ -1.09
PTPRO-210ENST00000544244 ROCK1Q13464 1354 aa8.22□□□□□ -1.09
PTPRO-210ENST00000544244 MYO5CQ9NQX4 1742 aa8.22□□□□□ -1.09
PTPRO-210ENST00000544244 RAB3GAP2Q9H2M9 1393 aa8.22□□□□□ -1.09
PTPRO-210ENST00000544244 ARAP3Q8WWN8 1544 aa8.22□□□□□ -1.09
PTPRO-210ENST00000544244 TAOK2Q9UL54 1235 aa8.21□□□□□ -1.09
PTPRO-210ENST00000544244 ABCA9Q8IUA7 1624 aa8.21□□□□□ -1.09
PTPRO-210ENST00000544244 SYCP2Q9BX26 1530 aa8.21□□□□□ -1.09
PTPRO-210ENST00000544244 CFAP74Q9C0B2 1584 aa8.21□□□□□ -1.1
PTPRO-210ENST00000544244 ZNF518AQ6AHZ1 1483 aa8.21□□□□□ -1.1
PTPRO-210ENST00000544244 TRAPPC8Q9Y2L5 1435 aa8.21□□□□□ -1.1
PTPRO-210ENST00000544244 GLI2P10070 1586 aa8.21□□□□□ -1.1
PTPRO-210ENST00000544244 ANKRD50Q9ULJ7 1429 aa8.21□□□□□ -1.1
PTPRO-210ENST00000544244 NUP155O75694 1391 aa8.2□□□□□ -1.1
PTPRO-210ENST00000544244 NEUROD1Q13562 356 aa8.2□□□□□ -1.1
PTPRO-210ENST00000544244 PREX2Q70Z35 1606 aa8.2□□□□□ -1.1
PTPRO-210ENST00000544244 RNF216Q9NWF9 866 aaPredicted RBP8.19□□□□□ -1.1
PTPRO-210ENST00000544244 ATF5Q9Y2D1 282 aaPredicted RBP8.19□□□□□ -1.1
PTPRO-210ENST00000544244 HFM1A2PYH4 1435 aa8.18□□□□□ -1.1
PTPRO-210ENST00000544244 RTEL1-TNFRSF6BF6WH68 1400 aa8.18□□□□□ -1.1
PTPRO-210ENST00000544244 NCOA1Q15788 1441 aa8.18□□□□□ -1.1
PTPRO-210ENST00000544244 DIP2BQ9P265 1576 aa8.18□□□□□ -1.1
PTPRO-210ENST00000544244 WASHC2CQ9Y4E1 1318 aa8.18□□□□□ -1.1
PTPRO-210ENST00000544244 POGZQ7Z3K3 1410 aa8.18□□□□□ -1.1
PTPRO-210ENST00000544244 SHANK2Q9UPX8 1470 aa8.17□□□□□ -1.1
PTPRO-210ENST00000544244 MPHOSPH9Q99550 1183 aa8.17□□□□□ -1.1
PTPRO-210ENST00000544244 MBD5Q9P267 1494 aa8.17□□□□□ -1.1
PTPRO-210ENST00000544244 CDC42BPAQ5VT25 1732 aa8.17□□□□□ -1.1
PTPRO-210ENST00000544244 PKD2Q13563 968 aa8.17□□□□□ -1.1
PTPRO-210ENST00000544244 SAMD9LQ8IVG5 1584 aa8.17□□□□□ -1.1
PTPRO-210ENST00000544244 ARHGEF5Q12774 1597 aa8.16□□□□□ -1.1
PTPRO-210ENST00000544244 STAG3Q9UJ98 1225 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms