RNA–Protein interactions for RNA: ENST00000544244.5

PTPRO-210, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRO, Length 3,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-210ENST00000544244 NISCHQ9Y2I1 1504 aa12.6□□□□□ -0.39
PTPRO-210ENST00000544244 CHIC1Q5VXU3 224 aa12.11□□□□□ -0.47
PTPRO-210ENST00000544244 AEBP2Q6ZN18 517 aaPredicted RBP11.96□□□□□ -0.5
PTPRO-210ENST00000544244 CCDC180Q9P1Z9 1646 aa10.98□□□□□ -0.65
PTPRO-210ENST00000544244 PHF23Q9BUL5 403 aaPredicted RBP10.95□□□□□ -0.66
PTPRO-210ENST00000544244 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
PTPRO-210ENST00000544244 ABCC9O60706 1549 aa10.73□□□□□ -0.69
PTPRO-210ENST00000544244 ZCCHC6Q5VYS8 1495 aaKnown RBP10.51□□□□□ -0.73
PTPRO-210ENST00000544244 SHROOM4Q9ULL8 1493 aa10.38□□□□□ -0.75
PTPRO-210ENST00000544244 NACADO15069 1562 aa10.38□□□□□ -0.75
PTPRO-210ENST00000544244 DCAF1Q9Y4B6 1507 aa10.37□□□□□ -0.75
PTPRO-210ENST00000544244 RB1CC1Q8TDY2 1594 aa10.36□□□□□ -0.75
PTPRO-210ENST00000544244 MYO15BQ96JP2 1530 aa10.31□□□□□ -0.76
PTPRO-210ENST00000544244 SCRIBQ14160 1630 aa10.18□□□□□ -0.78
PTPRO-210ENST00000544244 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
PTPRO-210ENST00000544244 EHMT2Q96KQ7 1210 aa10.16□□□□□ -0.78
PTPRO-210ENST00000544244 PLPPR3Q6T4P5 718 aa10.07□□□□□ -0.8
PTPRO-210ENST00000544244 SUPT5HO00267 1087 aaKnown RBP10.01□□□□□ -0.81
PTPRO-210ENST00000544244 KCNA4P22459 653 aa9.85□□□□□ -0.83
PTPRO-210ENST00000544244 BICRAQ9NZM4 1560 aa9.85□□□□□ -0.83
PTPRO-210ENST00000544244 UNC13AQ9UPW8 1703 aa9.83□□□□□ -0.84
PTPRO-210ENST00000544244 CECR2Q9BXF3 1484 aa9.8□□□□□ -0.84
PTPRO-210ENST00000544244 ADRA2BP18089 450 aa9.8□□□□□ -0.84
PTPRO-210ENST00000544244 BAZ1AQ9NRL2 1556 aaPredicted RBP9.79□□□□□ -0.84
PTPRO-210ENST00000544244 RSF1Q96T23 1441 aaPredicted RBP9.75□□□□□ -0.85
PTPRO-210ENST00000544244 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.86
PTPRO-210ENST00000544244 SENP3Q9H4L4 574 aaPredicted RBP9.69□□□□□ -0.86
PTPRO-210ENST00000544244 SMARCA4P51532 1647 aa9.68□□□□□ -0.86
PTPRO-210ENST00000544244 EIF4G1Q04637 1599 aaKnown RBP9.68□□□□□ -0.86
PTPRO-210ENST00000544244 SMARCA2P51531 1590 aa9.66□□□□□ -0.86
PTPRO-210ENST00000544244 BAZ1BQ9UIG0 1483 aaKnown RBP9.65□□□□□ -0.86
PTPRO-210ENST00000544244 ATAD2BQ9ULI0 1458 aa9.63□□□□□ -0.87
PTPRO-210ENST00000544244 CSRNP3Q8WYN3 585 aa9.6□□□□□ -0.87
PTPRO-210ENST00000544244 NCAPD3P42695 1498 aa9.58□□□□□ -0.88
PTPRO-210ENST00000544244 CC2D2AQ9P2K1 1620 aa9.58□□□□□ -0.88
PTPRO-210ENST00000544244 WIZO95785 1651 aa9.58□□□□□ -0.88
PTPRO-210ENST00000544244 TOP2AP11388 1531 aaKnown RBP9.54□□□□□ -0.88
PTPRO-210ENST00000544244 DNAJC5BQ9UF47 199 aa9.53□□□□□ -0.88
PTPRO-210ENST00000544244 PPP6R1Q9UPN7 881 aa9.51□□□□□ -0.89
PTPRO-210ENST00000544244 HMGXB3Q12766 1538 aa9.5□□□□□ -0.89
PTPRO-210ENST00000544244 PEG3Q9GZU2 1588 aa9.5□□□□□ -0.89
PTPRO-210ENST00000544244 CCDC88BA6NC98 1476 aa9.47□□□□□ -0.89
PTPRO-210ENST00000544244 TRIM41Q8WV44 630 aa9.44□□□□□ -0.9
PTPRO-210ENST00000544244 CADPSQ9ULU8 1353 aa9.41□□□□□ -0.9
PTPRO-210ENST00000544244 SLC24A1O60721 1099 aa9.39□□□□□ -0.91
PTPRO-210ENST00000544244 PDS5BQ9NTI5 1447 aa9.36□□□□□ -0.91
PTPRO-210ENST00000544244 SLC4A1APQ9BWU0 796 aaKnown RBP9.34□□□□□ -0.91
PTPRO-210ENST00000544244 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
PTPRO-210ENST00000544244 CFTRP13569 1480 aa9.31□□□□□ -0.92
PTPRO-210ENST00000544244 FAM9AQ8IZU1 332 aaPredicted RBP9.28□□□□□ -0.92
PTPRO-210ENST00000544244 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
PTPRO-210ENST00000544244 NESP48681 1621 aa9.27□□□□□ -0.92
PTPRO-210ENST00000544244 WRNQ14191 1432 aaPredicted RBP eCLIP9.27□□□□□ -0.93
PTPRO-210ENST00000544244 LAMC3Q9Y6N6 1575 aa9.26□□□□□ -0.93
PTPRO-210ENST00000544244 CEP164Q9UPV0 1460 aa9.26□□□□□ -0.93
PTPRO-210ENST00000544244 RTN4Q9NQC3 1192 aaKnown RBP9.24□□□□□ -0.93
PTPRO-210ENST00000544244 ABCC8Q09428 1581 aa9.21□□□□□ -0.94
PTPRO-210ENST00000544244 ZBTB22O15209 634 aa9.18□□□□□ -0.94
PTPRO-210ENST00000544244 MRC2Q9UBG0 1479 aa9.16□□□□□ -0.94
PTPRO-210ENST00000544244 FOXD1Q16676 465 aa9.14□□□□□ -0.95
PTPRO-210ENST00000544244 SOGA1O94964 1423 aa9.14□□□□□ -0.95
PTPRO-210ENST00000544244 UBTFP17480 764 aaKnown RBP9.13□□□□□ -0.95
PTPRO-210ENST00000544244 TOPBP1Q92547 1522 aa9.11□□□□□ -0.95
PTPRO-210ENST00000544244 KIF27Q86VH2 1401 aa9.11□□□□□ -0.95
PTPRO-210ENST00000544244 DNMBPQ6XZF7 1577 aa9.1□□□□□ -0.95
PTPRO-210ENST00000544244 EEA1Q15075 1411 aa9.09□□□□□ -0.95
PTPRO-210ENST00000544244 FGD5Q6ZNL6 1462 aa9.09□□□□□ -0.95
PTPRO-210ENST00000544244 CUX2O14529 1486 aa9.09□□□□□ -0.95
PTPRO-210ENST00000544244 CUX1P39880 1505 aa9.09□□□□□ -0.95
PTPRO-210ENST00000544244 FBLN2P98095 1184 aa9.08□□□□□ -0.96
PTPRO-210ENST00000544244 URB2Q14146 1524 aaKnown RBP9.07□□□□□ -0.96
PTPRO-210ENST00000544244 PPP4R3CPQ6ZMV5 832 aa9.07□□□□□ -0.96
PTPRO-210ENST00000544244 TOP2BQ02880 1626 aa9.07□□□□□ -0.96
PTPRO-210ENST00000544244 PRDM2Q13029 1718 aa9.06□□□□□ -0.96
PTPRO-210ENST00000544244 TDRD9Q8NDG6 1382 aaKnown RBP9.06□□□□□ -0.96
PTPRO-210ENST00000544244 SYNJ1O43426 1573 aa9.06□□□□□ -0.96
PTPRO-210ENST00000544244 IFT140Q96RY7 1462 aa9.05□□□□□ -0.96
PTPRO-210ENST00000544244 KIF21AQ7Z4S6 1674 aa9.05□□□□□ -0.96
PTPRO-210ENST00000544244 POLA1P09884 1462 aaPredicted RBP9.04□□□□□ -0.96
PTPRO-210ENST00000544244 RAD54L2Q9Y4B4 1467 aa9.04□□□□□ -0.96
PTPRO-210ENST00000544244 RANGAP1P46060 587 aaPredicted RBP9.04□□□□□ -0.96
PTPRO-210ENST00000544244 CHMP7Q8WUX9 453 aaPredicted RBP9.04□□□□□ -0.96
PTPRO-210ENST00000544244 LOC105371045A0A1W2PR82 267 aa9.02□□□□□ -0.97
PTPRO-210ENST00000544244 WDR62O43379 1518 aa9.01□□□□□ -0.97
PTPRO-210ENST00000544244 BIVM-ERCC5R4GMW8 1640 aa9□□□□□ -0.97
PTPRO-210ENST00000544244 GAPVD1Q14C86 1478 aa8.99□□□□□ -0.97
PTPRO-210ENST00000544244 CARMIL1Q5VZK9 1371 aa8.99□□□□□ -0.97
PTPRO-210ENST00000544244 NPM3O75607 178 aaKnown RBP8.98□□□□□ -0.97
PTPRO-210ENST00000544244 ABCA10Q8WWZ4 1543 aa8.98□□□□□ -0.97
PTPRO-210ENST00000544244 AQRO60306 1485 aaKnown RBP eCLIP8.97□□□□□ -0.97
PTPRO-210ENST00000544244 GRIN2BQ13224 1484 aa8.96□□□□□ -0.98
PTPRO-210ENST00000544244 IGF1RP08069 1367 aa8.96□□□□□ -0.98
PTPRO-210ENST00000544244 RUSC2Q8N2Y8 1516 aa8.95□□□□□ -0.98
PTPRO-210ENST00000544244 APLP2Q06481 763 aa8.95□□□□□ -0.98
PTPRO-210ENST00000544244 GOLGA3Q08378 1498 aa8.94□□□□□ -0.98
PTPRO-210ENST00000544244 THOC2Q8NI27 1593 aaKnown RBP8.94□□□□□ -0.98
PTPRO-210ENST00000544244 RAPGEF2Q9Y4G8 1499 aa8.91□□□□□ -0.98
PTPRO-210ENST00000544244 ZNF608Q9ULD9 1512 aaPredicted RBP8.91□□□□□ -0.98
PTPRO-210ENST00000544244 ATP1B4Q9UN42 357 aaPredicted RBP8.91□□□□□ -0.98
PTPRO-210ENST00000544244 FHAD1B1AJZ9 1412 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms