RNA–Protein interactions for RNA: ENST00000543824.5

PHC1-212, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 4,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-212ENST00000543824 BRPF3Q9ULD4 1205 aa23.51■■□□□ 1.35
PHC1-212ENST00000543824 KTN1Q86UP2 1357 aaKnown RBP23.51■■□□□ 1.35
PHC1-212ENST00000543824 PHLDB1Q86UU1 1377 aa23.5■■□□□ 1.35
PHC1-212ENST00000543824 TNNT2P45379 298 aaPredicted RBP23.49■■□□□ 1.35
PHC1-212ENST00000543824 NLRP13Q86W25 1043 aa23.47■■□□□ 1.35
PHC1-212ENST00000543824 CRBNQ96SW2 442 aa23.46■■□□□ 1.35
PHC1-212ENST00000543824 CCDC18Q5T9S5 1454 aa23.46■■□□□ 1.35
PHC1-212ENST00000543824 RRBP1Q9P2E9 1410 aaKnown RBP23.46■■□□□ 1.35
PHC1-212ENST00000543824 SMARCA2P51531 1590 aa23.46■■□□□ 1.35
PHC1-212ENST00000543824 NFKBIBQ15653 356 aa23.45■■□□□ 1.34
PHC1-212ENST00000543824 PDE3BQ13370 1112 aa23.44■■□□□ 1.34
PHC1-212ENST00000543824 RSPH6AQ9H0K4 717 aa23.44■■□□□ 1.34
PHC1-212ENST00000543824 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
PHC1-212ENST00000543824 PLEKHD1A6NEE1 506 aa23.43■■□□□ 1.34
PHC1-212ENST00000543824 HSP90AB1P08238 724 aaKnown RBP23.43■■□□□ 1.34
PHC1-212ENST00000543824 TMF1P82094 1093 aa23.43■■□□□ 1.34
PHC1-212ENST00000543824 CCDC7Q96M83 1385 aa23.42■■□□□ 1.34
PHC1-212ENST00000543824 MS4A1P11836 297 aa23.42■■□□□ 1.34
PHC1-212ENST00000543824 KIF7Q2M1P5 1343 aa23.42■■□□□ 1.34
PHC1-212ENST00000543824 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
PHC1-212ENST00000543824 ARAP1Q96P48 1450 aa23.42■■□□□ 1.34
PHC1-212ENST00000543824 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
PHC1-212ENST00000543824 PTMAP06454 111 aaKnown RBP23.41■■□□□ 1.34
PHC1-212ENST00000543824 GOLGA6L3A6NEY3 463 aa23.41■■□□□ 1.34
PHC1-212ENST00000543824 DNTTIP2Q5QJE6 756 aaKnown RBP23.41■■□□□ 1.34
PHC1-212ENST00000543824 ST20-MTHFSA0A0A6YYL1 179 aa23.41■■□□□ 1.34
PHC1-212ENST00000543824 CDCA8Q53HL2 280 aa23.41■■□□□ 1.34
PHC1-212ENST00000543824 HSCBQ8IWL3 235 aa23.4■■□□□ 1.34
PHC1-212ENST00000543824 FAM161AQ3B820 660 aa23.4■■□□□ 1.34
PHC1-212ENST00000543824 TPRNQ4KMQ1 711 aa23.39■■□□□ 1.34
PHC1-212ENST00000543824 VSIG10Q8N0Z9 540 aa23.39■■□□□ 1.33
PHC1-212ENST00000543824 MYH16Q9H6N6 1097 aa23.38■■□□□ 1.33
PHC1-212ENST00000543824 CNTLNQ9NXG0 1405 aa23.38■■□□□ 1.33
PHC1-212ENST00000543824 MYBBP1AQ9BQG0 1328 aaKnown RBP23.37■■□□□ 1.33
PHC1-212ENST00000543824 SMARCA4P51532 1647 aa23.36■■□□□ 1.33
PHC1-212ENST00000543824 ARID3AQ99856 593 aa23.36■■□□□ 1.33
PHC1-212ENST00000543824 GOLGA2Q08379 1002 aa23.34■■□□□ 1.33
PHC1-212ENST00000543824 HSP90AA2PQ14568 343 aaPredicted RBP23.33■■□□□ 1.33
PHC1-212ENST00000543824 ROCK2O75116 1388 aaKnown RBP23.33■■□□□ 1.33
PHC1-212ENST00000543824 CENPQQ7L2Z9 268 aaPredicted RBP23.33■■□□□ 1.33
PHC1-212ENST00000543824 CCDC146Q8IYE0 955 aa23.32■■□□□ 1.32
PHC1-212ENST00000543824 KIF15Q9NS87 1388 aa23.31■■□□□ 1.32
PHC1-212ENST00000543824 MSNP26038 577 aaKnown RBP23.31■■□□□ 1.32
PHC1-212ENST00000543824 CHMP7Q8WUX9 453 aaPredicted RBP23.31■■□□□ 1.32
PHC1-212ENST00000543824 CFAP53Q96M91 514 aa23.31■■□□□ 1.32
PHC1-212ENST00000543824 USP47Q96K76 1375 aa23.29■■□□□ 1.32
PHC1-212ENST00000543824 CLUAP1Q96AJ1 413 aa23.29■■□□□ 1.32
PHC1-212ENST00000543824 MFAP1P55081 439 aaKnown RBP23.28■■□□□ 1.32
PHC1-212ENST00000543824 UACAQ9BZF9 1416 aa23.28■■□□□ 1.32
PHC1-212ENST00000543824 NUP155O75694 1391 aa23.27■■□□□ 1.32
PHC1-212ENST00000543824 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
PHC1-212ENST00000543824 FRAT2O75474 233 aaPredicted RBP23.27■■□□□ 1.32
PHC1-212ENST00000543824 ZBTB7CA1YPR0 619 aa23.26■■□□□ 1.31
PHC1-212ENST00000543824 LRRC9Q6ZRR7 1453 aa23.26■■□□□ 1.31
PHC1-212ENST00000543824 CDCA7LQ96GN5 454 aa23.26■■□□□ 1.31
PHC1-212ENST00000543824 BACH2Q9BYV9 841 aa23.25■■□□□ 1.31
PHC1-212ENST00000543824 PLCB2Q00722 1185 aa23.23■■□□□ 1.31
PHC1-212ENST00000543824 FGD6Q6ZV73 1430 aa23.21■■□□□ 1.31
PHC1-212ENST00000543824 U2SURPO15042 1029 aaKnown RBP23.2■■□□□ 1.3
PHC1-212ENST00000543824 PANK3Q9H999 370 aa23.2■■□□□ 1.3
PHC1-212ENST00000543824 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
PHC1-212ENST00000543824 RWDD1Q9H446 243 aaPredicted RBP23.19■■□□□ 1.3
PHC1-212ENST00000543824 FOXD4L1Q9NU39 408 aa23.19■■□□□ 1.3
PHC1-212ENST00000543824 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
PHC1-212ENST00000543824 IGF1RP08069 1367 aa23.19■■□□□ 1.3
PHC1-212ENST00000543824 GBP4Q96PP9 640 aa23.19■■□□□ 1.3
PHC1-212ENST00000543824 ATAD2BQ9ULI0 1458 aa23.18■■□□□ 1.3
PHC1-212ENST00000543824 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
PHC1-212ENST00000543824 NBPF8Q3BBV2 869 aa23.16■■□□□ 1.3
PHC1-212ENST00000543824 SKAP1Q86WV1 359 aa23.16■■□□□ 1.3
PHC1-212ENST00000543824 COG6Q9Y2V7 657 aa23.15■■□□□ 1.3
PHC1-212ENST00000543824 BCL2L13Q9BXK5 485 aa23.14■■□□□ 1.3
PHC1-212ENST00000543824 C11orf95C9JLR9 678 aaPredicted RBP23.14■■□□□ 1.29
PHC1-212ENST00000543824 PMFBP1Q8TBY8 1022 aa23.13■■□□□ 1.29
PHC1-212ENST00000543824 CENPJQ9HC77 1338 aaPredicted RBP23.13■■□□□ 1.29
PHC1-212ENST00000543824 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
PHC1-212ENST00000543824 MORC1Q86VD1 984 aa23.12■■□□□ 1.29
PHC1-212ENST00000543824 ITPRIPQ8IWB1 547 aa23.1■■□□□ 1.29
PHC1-212ENST00000543824 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
PHC1-212ENST00000543824 APAF1O14727 1248 aa23.08■■□□□ 1.28
PHC1-212ENST00000543824 RRP7AQ9Y3A4 280 aaKnown RBP23.08■■□□□ 1.28
PHC1-212ENST00000543824 CASC1Q6TDU7 716 aa23.07■■□□□ 1.28
PHC1-212ENST00000543824 STAG3Q9UJ98 1225 aa23.07■■□□□ 1.28
PHC1-212ENST00000543824 ANKRD30AQ9BXX3 1397 aa23.06■■□□□ 1.28
PHC1-212ENST00000543824 PRXQ9BXM0 1461 aa23.05■■□□□ 1.28
PHC1-212ENST00000543824 U2AF1L5P0DN76 240 aaPredicted RBP23.04■■□□□ 1.28
PHC1-212ENST00000543824 U2AF1Q01081 240 aaKnown RBP eCLIP23.04■■□□□ 1.28
PHC1-212ENST00000543824 ZNF644Q9H582 1327 aaPredicted RBP23.03■■□□□ 1.28
PHC1-212ENST00000543824 MYOM3Q5VTT5 1437 aa23.01■■□□□ 1.27
PHC1-212ENST00000543824 APBB1O00213 710 aa23.01■■□□□ 1.27
PHC1-212ENST00000543824 FAM43AQ8N2R8 423 aa23■■□□□ 1.27
PHC1-212ENST00000543824 DDX11L8A8MPP1 907 aa23■■□□□ 1.27
PHC1-212ENST00000543824 SMC4Q9NTJ3 1288 aa23■■□□□ 1.27
PHC1-212ENST00000543824 CGNL1Q0VF96 1302 aa23■■□□□ 1.27
PHC1-212ENST00000543824 ERICH3Q5RHP9 1530 aa22.99■■□□□ 1.27
PHC1-212ENST00000543824 BRD4O60885 1362 aaPredicted RBP22.98■■□□□ 1.27
PHC1-212ENST00000543824 ADAMTS8Q9UP79 889 aa22.98■■□□□ 1.27
PHC1-212ENST00000543824 CALD1Q05682 793 aaKnown RBP22.97■■□□□ 1.27
PHC1-212ENST00000543824 HNRNPMP52272 730 aaKnown RBP eCLIP22.97■■□□□ 1.27
PHC1-212ENST00000543824 E9PSI1 815 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms