RNA–Protein interactions for RNA: ENST00000543736.5

FANCA-205, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-205ENST00000543736 CFAP74Q9C0B2 1584 aa23.06■■□□□ 1.28
FANCA-205ENST00000543736 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
FANCA-205ENST00000543736 UBAP1LF5GYI3 381 aa23.02■■□□□ 1.28
FANCA-205ENST00000543736 NCOA1Q15788 1441 aa22.98■■□□□ 1.27
FANCA-205ENST00000543736 C9orf84Q5VXU9 1444 aa22.96■■□□□ 1.27
FANCA-205ENST00000543736 RAPGEF6Q8TEU7 1601 aa22.96■■□□□ 1.27
FANCA-205ENST00000543736 ATP10AO60312 1499 aa22.95■■□□□ 1.26
FANCA-205ENST00000543736 C3P01024 1663 aa22.93■■□□□ 1.26
FANCA-205ENST00000543736 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.91■■□□□ 1.265e-7■■■□□ 18.8
FANCA-205ENST00000543736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.9■■□□□ 1.26
FANCA-205ENST00000543736 HNRNPUL2Q1KMD3 747 aaKnown RBP22.9■■□□□ 1.26
FANCA-205ENST00000543736 ZNF335Q9H4Z2 1342 aaPredicted RBP22.89■■□□□ 1.26
FANCA-205ENST00000543736 HSPA1LP34931 641 aa22.88■■□□□ 1.25
FANCA-205ENST00000543736 P3H3Q8IVL6 736 aa22.88■■□□□ 1.25
FANCA-205ENST00000543736 NUP153P49790 1475 aaKnown RBP22.87■■□□□ 1.25
FANCA-205ENST00000543736 FAM9AQ8IZU1 332 aaPredicted RBP22.87■■□□□ 1.25
FANCA-205ENST00000543736 CAMSAP1Q5T5Y3 1602 aa22.84■■□□□ 1.25
FANCA-205ENST00000543736 PHF23Q9BUL5 403 aaPredicted RBP22.84■■□□□ 1.25
FANCA-205ENST00000543736 SCAPERQ9BY12 1400 aa22.83■■□□□ 1.25
FANCA-205ENST00000543736 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
FANCA-205ENST00000543736 SAMD9Q5K651 1589 aa22.8■■□□□ 1.24
FANCA-205ENST00000543736 SCAF1Q9H7N4 1312 aaKnown RBP22.76■■□□□ 1.23
FANCA-205ENST00000543736 PLEKHD1A6NEE1 506 aa22.74■■□□□ 1.23
FANCA-205ENST00000543736 NCKAP5LQ9HCH0 1330 aa22.74■■□□□ 1.23
FANCA-205ENST00000543736 PIP4K2BP78356 416 aa22.73■■□□□ 1.23
FANCA-205ENST00000543736 PRXQ9BXM0 1461 aa22.72■■□□□ 1.23
FANCA-205ENST00000543736 REREQ9P2R6 1566 aa22.72■■□□□ 1.23
FANCA-205ENST00000543736 DIP2CQ9Y2E4 1556 aa22.72■■□□□ 1.23
FANCA-205ENST00000543736 PLCH2O75038 1416 aa22.7■■□□□ 1.22
FANCA-205ENST00000543736 KDM5CP41229 1560 aa22.69■■□□□ 1.22
FANCA-205ENST00000543736 AGLP35573 1532 aa22.67■■□□□ 1.22
FANCA-205ENST00000543736 ZNF518AQ6AHZ1 1483 aa22.66■■□□□ 1.22
FANCA-205ENST00000543736 PLA2R1Q13018 1463 aa22.66■■□□□ 1.22
FANCA-205ENST00000543736 ABCA6Q8N139 1617 aa22.65■■□□□ 1.22
FANCA-205ENST00000543736 TCOF1Q13428 1488 aaKnown RBP22.65■■□□□ 1.22
FANCA-205ENST00000543736 NPATQ14207 1427 aa22.64■■□□□ 1.21
FANCA-205ENST00000543736 ZNF142P52746 1687 aaPredicted RBP22.63■■□□□ 1.21
FANCA-205ENST00000543736 TOM1O60784 492 aa22.62■■□□□ 1.21
FANCA-205ENST00000543736 ESF1Q9H501 851 aaKnown RBP22.62■■□□□ 1.21
FANCA-205ENST00000543736 CNTLNQ9NXG0 1405 aa22.61■■□□□ 1.21
FANCA-205ENST00000543736 SUPT6HQ7KZ85 1726 aaKnown RBP22.6■■□□□ 1.21
FANCA-205ENST00000543736 MYO5CQ9NQX4 1742 aa22.6■■□□□ 1.21
FANCA-205ENST00000543736 PKD2Q13563 968 aa22.6■■□□□ 1.21
FANCA-205ENST00000543736 MYO3AQ8NEV4 1616 aa22.6■■□□□ 1.21
FANCA-205ENST00000543736 ALKQ9UM73 1620 aa22.59■■□□□ 1.21
FANCA-205ENST00000543736 MROH2AA6NES4 1674 aa22.58■■□□□ 1.21
FANCA-205ENST00000543736 RGS17Q9UGC6 210 aaPredicted RBP22.58■■□□□ 1.21
FANCA-205ENST00000543736 AFAP1Q8N556 730 aa22.57■■□□□ 1.2
FANCA-205ENST00000543736 PPP6R1Q9UPN7 881 aa22.57■■□□□ 1.2
FANCA-205ENST00000543736 CPS1P31327 1500 aa22.57■■□□□ 1.2
FANCA-205ENST00000543736 CEP170BQ9Y4F5 1589 aaPredicted RBP22.55■■□□□ 1.2
FANCA-205ENST00000543736 EFCAB2Q5VUJ9 269 aa22.54■■□□□ 1.2
FANCA-205ENST00000543736 CDK13Q14004 1512 aaKnown RBP22.53■■□□□ 1.2
FANCA-205ENST00000543736 MLH3Q9UHC1 1453 aa22.52■■□□□ 1.2
FANCA-205ENST00000543736 MYT1LQ9UL68 1186 aa22.51■■□□□ 1.19
FANCA-205ENST00000543736 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
FANCA-205ENST00000543736 ZMYM3Q14202 1370 aa22.48■■□□□ 1.19
FANCA-205ENST00000543736 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
FANCA-205ENST00000543736 ARHGAP5Q13017 1502 aa22.46■■□□□ 1.19
FANCA-205ENST00000543736 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
FANCA-205ENST00000543736 KIF14Q15058 1648 aa22.43■■□□□ 1.18
FANCA-205ENST00000543736 POLR1AO95602 1720 aaPredicted RBP22.43■■□□□ 1.18
FANCA-205ENST00000543736 NEURL4Q96JN8 1562 aa22.42■■□□□ 1.18
FANCA-205ENST00000543736 KIDINS220Q9ULH0 1771 aa22.42■■□□□ 1.18
FANCA-205ENST00000543736 SETD1AO15047 1707 aaKnown RBP22.42■■□□□ 1.18
FANCA-205ENST00000543736 CLTCQ00610 1675 aaKnown RBP22.41■■□□□ 1.18
FANCA-205ENST00000543736 VWDEQ8N2E2 1590 aa22.39■■□□□ 1.18
FANCA-205ENST00000543736 SRCAPQ6ZRS2 3230 aa22.38■■□□□ 1.17
FANCA-205ENST00000543736 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
FANCA-205ENST00000543736 POTEAQ6S8J7 498 aa22.37■■□□□ 1.17
FANCA-205ENST00000543736 DNMT1P26358 1616 aaKnown RBP22.37■■□□□ 1.17
FANCA-205ENST00000543736 ABCC1P33527 1531 aa22.36■■□□□ 1.17
FANCA-205ENST00000543736 ITSN2Q9NZM3 1697 aa22.35■■□□□ 1.17
FANCA-205ENST00000543736 A2ML1A8K2U0 1454 aa22.34■■□□□ 1.17
FANCA-205ENST00000543736 CDC42BPBQ9Y5S2 1711 aa22.34■■□□□ 1.17
FANCA-205ENST00000543736 RNF17Q9BXT8 1623 aaKnown RBP22.32■■□□□ 1.16
FANCA-205ENST00000543736 STRCP1A6NGW2 1772 aa22.25■■□□□ 1.15
FANCA-205ENST00000543736 PREX2Q70Z35 1606 aa22.25■■□□□ 1.15
FANCA-205ENST00000543736 LRRC7Q96NW7 1537 aa22.24■■□□□ 1.15
FANCA-205ENST00000543736 TROQ12816 1431 aaPredicted RBP22.23■■□□□ 1.15
FANCA-205ENST00000543736 SYNMO15061 1565 aa22.23■■□□□ 1.15
FANCA-205ENST00000543736 PLXNC1O60486 1568 aa22.23■■□□□ 1.15
FANCA-205ENST00000543736 SAMD9LQ8IVG5 1584 aa22.22■■□□□ 1.15
FANCA-205ENST00000543736 MED14O60244 1454 aa22.17■■□□□ 1.14
FANCA-205ENST00000543736 NPHP4O75161 1426 aaPredicted RBP22.17■■□□□ 1.14
FANCA-205ENST00000543736 CLIP1P30622 1438 aa22.17■■□□□ 1.14
FANCA-205ENST00000543736 CDK11AQ9UQ88 783 aaPredicted RBP22.17■■□□□ 1.14
FANCA-205ENST00000543736 DEPDC5O75140 1603 aa22.17■■□□□ 1.14
FANCA-205ENST00000543736 IQGAP1P46940 1657 aa22.15■■□□□ 1.14
FANCA-205ENST00000543736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.14■■□□□ 1.14
FANCA-205ENST00000543736 UPF1Q92900 1129 aaKnown RBP eCLIP22.14■■□□□ 1.13
FANCA-205ENST00000543736 ANKLE2Q86XL3 938 aa22.13■■□□□ 1.13
FANCA-205ENST00000543736 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
FANCA-205ENST00000543736 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
FANCA-205ENST00000543736 ATP7AQ04656 1500 aa22.11■■□□□ 1.13
FANCA-205ENST00000543736 A2MP01023 1474 aa22.11■■□□□ 1.13
FANCA-205ENST00000543736 GGT6Q6P531 493 aa22.11■■□□□ 1.13
FANCA-205ENST00000543736 TNRQ92752 1358 aa22.11■■□□□ 1.13
FANCA-205ENST00000543736 LRRIQ1Q96JM4 1722 aa22.09■■□□□ 1.13
FANCA-205ENST00000543736 INO80Q9ULG1 1556 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms