RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ZBED9Q6R2W3 1325 aa10.76□□□□□ -0.69
PRKAB1-207ENST00000542698 NESP48681 1621 aa10.76□□□□□ -0.69
PRKAB1-207ENST00000542698 TMF1P82094 1093 aa10.75□□□□□ -0.69
PRKAB1-207ENST00000542698 ANKRD30AQ9BXX3 1397 aa10.74□□□□□ -0.69
PRKAB1-207ENST00000542698 OSCARQ8IYS5 282 aa10.74□□□□□ -0.69
PRKAB1-207ENST00000542698 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
PRKAB1-207ENST00000542698 WASHC2AQ641Q2 1341 aa10.74□□□□□ -0.69
PRKAB1-207ENST00000542698 FANCIQ9NVI1 1328 aa10.74□□□□□ -0.69
PRKAB1-207ENST00000542698 MYOM3Q5VTT5 1437 aa10.73□□□□□ -0.69
PRKAB1-207ENST00000542698 CASKIN1Q8WXD9 1431 aa10.73□□□□□ -0.69
PRKAB1-207ENST00000542698 RGS3P49796 1198 aa10.72□□□□□ -0.69
PRKAB1-207ENST00000542698 KTN1Q86UP2 1357 aaKnown RBP10.72□□□□□ -0.69
PRKAB1-207ENST00000542698 HSP90AA1P07900 732 aaKnown RBP10.72□□□□□ -0.69
PRKAB1-207ENST00000542698 TCERG1O14776 1098 aaKnown RBP10.71□□□□□ -0.69
PRKAB1-207ENST00000542698 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
PRKAB1-207ENST00000542698 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.7
PRKAB1-207ENST00000542698 NLRP13Q86W25 1043 aa10.71□□□□□ -0.7
PRKAB1-207ENST00000542698 IPO9Q96P70 1041 aaKnown RBP10.71□□□□□ -0.7
PRKAB1-207ENST00000542698 BECN1Q14457 450 aa10.7□□□□□ -0.7
PRKAB1-207ENST00000542698 ROCK2O75116 1388 aaKnown RBP10.7□□□□□ -0.7
PRKAB1-207ENST00000542698 CCDC7Q96M83 1385 aa10.7□□□□□ -0.7
PRKAB1-207ENST00000542698 NPM1P06748 294 aaKnown RBP eCLIP10.7□□□□□ -0.7
PRKAB1-207ENST00000542698 WDR97A6NE52 1622 aa10.69□□□□□ -0.7
PRKAB1-207ENST00000542698 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
PRKAB1-207ENST00000542698 MRC2Q9UBG0 1479 aa10.69□□□□□ -0.7
PRKAB1-207ENST00000542698 PDE3BQ13370 1112 aa10.69□□□□□ -0.7
PRKAB1-207ENST00000542698 TIAM1Q13009 1591 aa10.69□□□□□ -0.7
PRKAB1-207ENST00000542698 KIF7Q2M1P5 1343 aa10.68□□□□□ -0.7
PRKAB1-207ENST00000542698 CARMIL2Q6F5E8 1435 aa10.68□□□□□ -0.7
PRKAB1-207ENST00000542698 FYCO1Q9BQS8 1478 aa10.67□□□□□ -0.7
PRKAB1-207ENST00000542698 GAPVD1Q14C86 1478 aa10.67□□□□□ -0.7
PRKAB1-207ENST00000542698 NCOA2Q15596 1464 aa10.67□□□□□ -0.7
PRKAB1-207ENST00000542698 SLC24A1O60721 1099 aa10.67□□□□□ -0.7
PRKAB1-207ENST00000542698 USP47Q96K76 1375 aa10.67□□□□□ -0.7
PRKAB1-207ENST00000542698 HNRNPMP52272 730 aaKnown RBP eCLIP10.67□□□□□ -0.7
PRKAB1-207ENST00000542698 ARXQ96QS3 562 aa10.67□□□□□ -0.7
PRKAB1-207ENST00000542698 ZNF644Q9H582 1327 aaPredicted RBP10.67□□□□□ -0.7
PRKAB1-207ENST00000542698 STAG3Q9UJ98 1225 aa10.66□□□□□ -0.7
PRKAB1-207ENST00000542698 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.66□□□□□ -0.7
PRKAB1-207ENST00000542698 KIF15Q9NS87 1388 aa10.66□□□□□ -0.7
PRKAB1-207ENST00000542698 CFAP53Q96M91 514 aa10.66□□□□□ -0.7
PRKAB1-207ENST00000542698 HFM1A2PYH4 1435 aa10.66□□□□□ -0.7
PRKAB1-207ENST00000542698 CNTLNQ9NXG0 1405 aa10.66□□□□□ -0.7
PRKAB1-207ENST00000542698 MYBBP1AQ9BQG0 1328 aaKnown RBP10.66□□□□□ -0.7
PRKAB1-207ENST00000542698 FRAT1Q92837 279 aaPredicted RBP10.66□□□□□ -0.7
PRKAB1-207ENST00000542698 JPH4Q96JJ6 628 aa10.65□□□□□ -0.7
PRKAB1-207ENST00000542698 THOC2Q8NI27 1593 aaKnown RBP10.64□□□□□ -0.71
PRKAB1-207ENST00000542698 ANP32BQ92688 251 aaKnown RBP10.64□□□□□ -0.71
PRKAB1-207ENST00000542698 RTN4Q9NQC3 1192 aaKnown RBP10.64□□□□□ -0.71
PRKAB1-207ENST00000542698 TNNT2P45379 298 aaPredicted RBP10.63□□□□□ -0.71
PRKAB1-207ENST00000542698 RSPH4AQ5TD94 716 aa10.63□□□□□ -0.71
PRKAB1-207ENST00000542698 CCDC184Q52MB2 194 aa10.62□□□□□ -0.71
PRKAB1-207ENST00000542698 EXOC6Q8TAG9 804 aa10.62□□□□□ -0.71
PRKAB1-207ENST00000542698 WDR62O43379 1518 aa10.62□□□□□ -0.71
PRKAB1-207ENST00000542698 NBPF8Q3BBV2 869 aa10.62□□□□□ -0.71
PRKAB1-207ENST00000542698 MAP3K1Q13233 1512 aa10.61□□□□□ -0.71
PRKAB1-207ENST00000542698 RRP1P56182 461 aaKnown RBP10.61□□□□□ -0.71
PRKAB1-207ENST00000542698 FTSJ3Q8IY81 847 aaKnown RBP10.61□□□□□ -0.71
PRKAB1-207ENST00000542698 ARID4BQ4LE39 1312 aaPredicted RBP10.6□□□□□ -0.71
PRKAB1-207ENST00000542698 PDE4AP27815 886 aa10.6□□□□□ -0.71
PRKAB1-207ENST00000542698 GOLGA2Q08379 1002 aa10.6□□□□□ -0.71
PRKAB1-207ENST00000542698 SENP3Q9H4L4 574 aaPredicted RBP10.6□□□□□ -0.71
PRKAB1-207ENST00000542698 PANK3Q9H999 370 aa10.6□□□□□ -0.71
PRKAB1-207ENST00000542698 NAIPQ13075 1403 aa10.6□□□□□ -0.71
PRKAB1-207ENST00000542698 EFCAB5A4FU69 1503 aa10.6□□□□□ -0.71
PRKAB1-207ENST00000542698 PLIN1O60240 522 aa10.58□□□□□ -0.72
PRKAB1-207ENST00000542698 EFCAB2Q5VUJ9 269 aa10.57□□□□□ -0.72
PRKAB1-207ENST00000542698 MORC1Q86VD1 984 aa10.57□□□□□ -0.72
PRKAB1-207ENST00000542698 CCDC144AA2RUR9 1427 aa10.56□□□□□ -0.72
PRKAB1-207ENST00000542698 POLA1P09884 1462 aaPredicted RBP10.56□□□□□ -0.72
PRKAB1-207ENST00000542698 MYH16Q9H6N6 1097 aa10.56□□□□□ -0.72
PRKAB1-207ENST00000542698 KIF21AQ7Z4S6 1674 aa10.56□□□□□ -0.72
PRKAB1-207ENST00000542698 ESF1Q9H501 851 aaKnown RBP10.55□□□□□ -0.72
PRKAB1-207ENST00000542698 MS4A1P11836 297 aa10.55□□□□□ -0.72
PRKAB1-207ENST00000542698 USP35Q9P2H5 1018 aa10.55□□□□□ -0.72
PRKAB1-207ENST00000542698 KANK1Q14678 1352 aa10.55□□□□□ -0.72
PRKAB1-207ENST00000542698 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
PRKAB1-207ENST00000542698 MIA2Q96PC5 1412 aa10.55□□□□□ -0.72
PRKAB1-207ENST00000542698 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
PRKAB1-207ENST00000542698 C11orf95C9JLR9 678 aaPredicted RBP10.55□□□□□ -0.72
PRKAB1-207ENST00000542698 U2SURPO15042 1029 aaKnown RBP10.54□□□□□ -0.72
PRKAB1-207ENST00000542698 PNISRQ8TF01 805 aaKnown RBP10.54□□□□□ -0.72
PRKAB1-207ENST00000542698 AQRO60306 1485 aaKnown RBP eCLIP10.54□□□□□ -0.722e-10■■■■□ 23.2
PRKAB1-207ENST00000542698 ANKRD50Q9ULJ7 1429 aa10.53□□□□□ -0.72
PRKAB1-207ENST00000542698 CRBNQ96SW2 442 aa10.53□□□□□ -0.72
PRKAB1-207ENST00000542698 CCDC146Q8IYE0 955 aa10.53□□□□□ -0.72
PRKAB1-207ENST00000542698 MAPKBP1O60336 1514 aa10.52□□□□□ -0.72
PRKAB1-207ENST00000542698 CENPQQ7L2Z9 268 aaPredicted RBP10.52□□□□□ -0.73
PRKAB1-207ENST00000542698 PCF11O94913 1555 aaKnown RBP10.52□□□□□ -0.73
PRKAB1-207ENST00000542698 BRD4O60885 1362 aaPredicted RBP10.52□□□□□ -0.73
PRKAB1-207ENST00000542698 EHBP1L1Q8N3D4 1523 aa10.51□□□□□ -0.73
PRKAB1-207ENST00000542698 DNMBPQ6XZF7 1577 aa10.51□□□□□ -0.73
PRKAB1-207ENST00000542698 TRIM44Q96DX7 344 aaPredicted RBP10.5□□□□□ -0.73
PRKAB1-207ENST00000542698 AKNAQ7Z591 1439 aa10.5□□□□□ -0.73
PRKAB1-207ENST00000542698 GOLGA6L22H0YM25 854 aa10.5□□□□□ -0.73
PRKAB1-207ENST00000542698 ABCA10Q8WWZ4 1543 aa10.5□□□□□ -0.73
PRKAB1-207ENST00000542698 KIF3BO15066 747 aa10.5□□□□□ -0.73
PRKAB1-207ENST00000542698 POGKQ9P215 609 aa10.5□□□□□ -0.73
PRKAB1-207ENST00000542698 MSH5O43196 834 aa10.49□□□□□ -0.73
PRKAB1-207ENST00000542698 U2AF1L5P0DN76 240 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms