RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 NISCHQ9Y2I1 1504 aa14.92□□□□□ -0.02
PRKAB1-207ENST00000542698 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.16
PRKAB1-207ENST00000542698 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
PRKAB1-207ENST00000542698 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
PRKAB1-207ENST00000542698 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
PRKAB1-207ENST00000542698 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
PRKAB1-207ENST00000542698 CCDC180Q9P1Z9 1646 aa13.01□□□□□ -0.33
PRKAB1-207ENST00000542698 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
PRKAB1-207ENST00000542698 CHIC1Q5VXU3 224 aa12.93□□□□□ -0.34
PRKAB1-207ENST00000542698 HRCP23327 699 aa12.9□□□□□ -0.35
PRKAB1-207ENST00000542698 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
PRKAB1-207ENST00000542698 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
PRKAB1-207ENST00000542698 LOC105371045A0A1W2PR82 267 aa12.77□□□□□ -0.37
PRKAB1-207ENST00000542698 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
PRKAB1-207ENST00000542698 TTBK1Q5TCY1 1321 aaPredicted RBP12.64□□□□□ -0.39
PRKAB1-207ENST00000542698 PPARGC1BQ86YN6 1023 aaKnown RBP12.62□□□□□ -0.39
PRKAB1-207ENST00000542698 CCER1Q8TC90 406 aaPredicted RBP12.62□□□□□ -0.39
PRKAB1-207ENST00000542698 ABCC9O60706 1549 aa12.6□□□□□ -0.39
PRKAB1-207ENST00000542698 APLP2Q06481 763 aa12.6□□□□□ -0.39
PRKAB1-207ENST00000542698 ZCCHC6Q5VYS8 1495 aaKnown RBP12.6□□□□□ -0.39
PRKAB1-207ENST00000542698 CENPBP07199 599 aaPredicted RBP12.52□□□□□ -0.41
PRKAB1-207ENST00000542698 PELP1Q8IZL8 1130 aaKnown RBP12.48□□□□□ -0.41
PRKAB1-207ENST00000542698 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
PRKAB1-207ENST00000542698 RANGAP1P46060 587 aaPredicted RBP12.39□□□□□ -0.43
PRKAB1-207ENST00000542698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
PRKAB1-207ENST00000542698 YTHDC1Q96MU7 727 aaKnown RBP12.26□□□□□ -0.45
PRKAB1-207ENST00000542698 MYO15BQ96JP2 1530 aa12.24□□□□□ -0.45
PRKAB1-207ENST00000542698 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
PRKAB1-207ENST00000542698 DIEXFQ68CQ4 756 aaKnown RBP12.19□□□□□ -0.46
PRKAB1-207ENST00000542698 NACADO15069 1562 aa12.17□□□□□ -0.46
PRKAB1-207ENST00000542698 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
PRKAB1-207ENST00000542698 RB1CC1Q8TDY2 1594 aa12.15□□□□□ -0.46
PRKAB1-207ENST00000542698 ATP1B4Q9UN42 357 aaPredicted RBP12.1□□□□□ -0.47
PRKAB1-207ENST00000542698 MYT1Q01538 1121 aa12.08□□□□□ -0.47
PRKAB1-207ENST00000542698 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.48
PRKAB1-207ENST00000542698 GTF3C3Q9Y5Q9 886 aa12.01□□□□□ -0.49
PRKAB1-207ENST00000542698 ITGAEP38570 1179 aa12.01□□□□□ -0.49
PRKAB1-207ENST00000542698 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
PRKAB1-207ENST00000542698 SCRIBQ14160 1630 aa11.99□□□□□ -0.49
PRKAB1-207ENST00000542698 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
PRKAB1-207ENST00000542698 RSF1Q96T23 1441 aaPredicted RBP11.97□□□□□ -0.49
PRKAB1-207ENST00000542698 ZNF316A6NFI3 1004 aaPredicted RBP11.96□□□□□ -0.49
PRKAB1-207ENST00000542698 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
PRKAB1-207ENST00000542698 NEFLP07196 543 aa11.95□□□□□ -0.5
PRKAB1-207ENST00000542698 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
PRKAB1-207ENST00000542698 SCAF1Q9H7N4 1312 aaKnown RBP11.85□□□□□ -0.51
PRKAB1-207ENST00000542698 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.51
PRKAB1-207ENST00000542698 NEUROD1Q13562 356 aa11.83□□□□□ -0.52
PRKAB1-207ENST00000542698 FAM50AQ14320 339 aaKnown RBP11.75□□□□□ -0.53
PRKAB1-207ENST00000542698 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
PRKAB1-207ENST00000542698 CEP162Q5TB80 1403 aa11.68□□□□□ -0.54
PRKAB1-207ENST00000542698 MIER1Q8N108 512 aa11.66□□□□□ -0.54
PRKAB1-207ENST00000542698 EEA1Q15075 1411 aa11.65□□□□□ -0.54
PRKAB1-207ENST00000542698 TNIKQ9UKE5 1360 aa11.64□□□□□ -0.55
PRKAB1-207ENST00000542698 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
PRKAB1-207ENST00000542698 BCANQ96GW7 911 aa11.62□□□□□ -0.55
PRKAB1-207ENST00000542698 CLIP1P30622 1438 aa11.62□□□□□ -0.55
PRKAB1-207ENST00000542698 ANP32CO43423 234 aa11.61□□□□□ -0.55
PRKAB1-207ENST00000542698 POLR3GLQ9BT43 218 aa11.59□□□□□ -0.55
PRKAB1-207ENST00000542698 P3H3Q8IVL6 736 aa11.58□□□□□ -0.55
PRKAB1-207ENST00000542698 MROH2BQ7Z745 1585 aa11.58□□□□□ -0.56
PRKAB1-207ENST00000542698 GOLGA3Q08378 1498 aa11.58□□□□□ -0.56
PRKAB1-207ENST00000542698 CLSPNQ9HAW4 1339 aa11.57□□□□□ -0.56
PRKAB1-207ENST00000542698 CNGB1Q14028 1251 aaPredicted RBP11.56□□□□□ -0.56
PRKAB1-207ENST00000542698 TRIM52Q96A61 297 aa11.55□□□□□ -0.56
PRKAB1-207ENST00000542698 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
PRKAB1-207ENST00000542698 BAZ1AQ9NRL2 1556 aaPredicted RBP11.55□□□□□ -0.56
PRKAB1-207ENST00000542698 BICRAQ9NZM4 1560 aa11.53□□□□□ -0.56
PRKAB1-207ENST00000542698 SOGA1O94964 1423 aa11.53□□□□□ -0.56
PRKAB1-207ENST00000542698 DDX10Q13206 875 aaKnown RBP11.52□□□□□ -0.57
PRKAB1-207ENST00000542698 WIZO95785 1651 aa11.5□□□□□ -0.57
PRKAB1-207ENST00000542698 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
PRKAB1-207ENST00000542698 FKBP8Q14318 412 aa11.47□□□□□ -0.57
PRKAB1-207ENST00000542698 CCDC88BA6NC98 1476 aa11.46□□□□□ -0.57
PRKAB1-207ENST00000542698 CDK11AQ9UQ88 783 aaPredicted RBP11.44□□□□□ -0.58
PRKAB1-207ENST00000542698 ABCC8Q09428 1581 aa11.43□□□□□ -0.58
PRKAB1-207ENST00000542698 TONSLQ96HA7 1378 aa11.42□□□□□ -0.58
PRKAB1-207ENST00000542698 HIRIP3Q9BW71 556 aaPredicted RBP11.38□□□□□ -0.59
PRKAB1-207ENST00000542698 BAZ1BQ9UIG0 1483 aaKnown RBP11.37□□□□□ -0.59
PRKAB1-207ENST00000542698 HNRNPUQ00839 825 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRKAB1-207ENST00000542698 ZNF326Q5BKZ1 582 aaKnown RBP11.36□□□□□ -0.59
PRKAB1-207ENST00000542698 VPS8Q8N3P4 1428 aa11.36□□□□□ -0.59
PRKAB1-207ENST00000542698 ARID3CA6NKF2 412 aa11.34□□□□□ -0.59
PRKAB1-207ENST00000542698 SMARCA4P51532 1647 aa11.34□□□□□ -0.59
PRKAB1-207ENST00000542698 TOP2AP11388 1531 aaKnown RBP11.34□□□□□ -0.59
PRKAB1-207ENST00000542698 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
PRKAB1-207ENST00000542698 DAXXQ9UER7 740 aaPredicted RBP11.34□□□□□ -0.59
PRKAB1-207ENST00000542698 EIF4G1Q04637 1599 aaKnown RBP11.32□□□□□ -0.6
PRKAB1-207ENST00000542698 RTL5Q5HYW3 569 aaPredicted RBP11.31□□□□□ -0.6
PRKAB1-207ENST00000542698 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
PRKAB1-207ENST00000542698 CCNB3Q8WWL7 1395 aa11.3□□□□□ -0.6
PRKAB1-207ENST00000542698 CUX2O14529 1486 aa11.3□□□□□ -0.6
PRKAB1-207ENST00000542698 CHIC2Q9UKJ5 165 aa11.3□□□□□ -0.6
PRKAB1-207ENST00000542698 CC2D2AQ9P2K1 1620 aa11.29□□□□□ -0.6
PRKAB1-207ENST00000542698 MTUS2Q5JR59 1369 aa11.29□□□□□ -0.6
PRKAB1-207ENST00000542698 SIN3AQ96ST3 1273 aa11.29□□□□□ -0.6
PRKAB1-207ENST00000542698 SUPT16HQ9Y5B9 1047 aaKnown RBP11.29□□□□□ -0.6
PRKAB1-207ENST00000542698 RUSC2Q8N2Y8 1516 aa11.28□□□□□ -0.6
PRKAB1-207ENST00000542698 FAM9BQ8IZU0 186 aa11.28□□□□□ -0.6
PRKAB1-207ENST00000542698 MYT1LQ9UL68 1186 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms