RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 TTC37Q6PGP7 1564 aa31.43■■■□□ 2.62
COPS7A-208ENST00000538410 MYOM3Q5VTT5 1437 aa31.43■■■□□ 2.62
COPS7A-208ENST00000538410 ITSN2Q9NZM3 1697 aa31.39■■■□□ 2.62
COPS7A-208ENST00000538410 CCNB3Q8WWL7 1395 aa31.37■■■□□ 2.61
COPS7A-208ENST00000538410 CFAP74Q9C0B2 1584 aa31.37■■■□□ 2.61
COPS7A-208ENST00000538410 CDC42BPAQ5VT25 1732 aa31.37■■■□□ 2.61
COPS7A-208ENST00000538410 FGD6Q6ZV73 1430 aa31.37■■■□□ 2.61
COPS7A-208ENST00000538410 FANCAO15360 1455 aa31.36■■■□□ 2.61
COPS7A-208ENST00000538410 RAPGEF3O95398 923 aa31.35■■■□□ 2.61
COPS7A-208ENST00000538410 ADGRL1O94910 1474 aa31.35■■■□□ 2.61
COPS7A-208ENST00000538410 AKNAQ7Z591 1439 aa31.33■■■□□ 2.61
COPS7A-208ENST00000538410 PTPN23Q9H3S7 1636 aa31.3■■■□□ 2.6
COPS7A-208ENST00000538410 GPATCH8Q9UKJ3 1502 aaKnown RBP31.3■■■□□ 2.6
COPS7A-208ENST00000538410 MIA2Q96PC5 1412 aa31.3■■■□□ 2.6
COPS7A-208ENST00000538410 PLCH2O75038 1416 aa31.3■■■□□ 2.6
COPS7A-208ENST00000538410 MYO5CQ9NQX4 1742 aa31.29■■■□□ 2.6
COPS7A-208ENST00000538410 FRMPD1Q5SYB0 1578 aa31.28■■■□□ 2.6
COPS7A-208ENST00000538410 DENND4BO75064 1496 aaPredicted RBP31.27■■■□□ 2.6
COPS7A-208ENST00000538410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.26■■■□□ 2.59
COPS7A-208ENST00000538410 PREX2Q70Z35 1606 aa31.26■■■□□ 2.59
COPS7A-208ENST00000538410 CDC42BPBQ9Y5S2 1711 aa31.25■■■□□ 2.59
COPS7A-208ENST00000538410 RICTORQ6R327 1708 aa31.24■■■□□ 2.59
COPS7A-208ENST00000538410 TCOF1Q13428 1488 aaKnown RBP31.24■■■□□ 2.59
COPS7A-208ENST00000538410 FAM50AQ14320 339 aaKnown RBP31.21■■■□□ 2.59
COPS7A-208ENST00000538410 EFCAB2Q5VUJ9 269 aa31.2■■■□□ 2.58
COPS7A-208ENST00000538410 CFDP1Q9UEE9 299 aaPredicted RBP31.17■■■□□ 2.58
COPS7A-208ENST00000538410 SCAPERQ9BY12 1400 aa31.15■■■□□ 2.58
COPS7A-208ENST00000538410 ARHGAP5Q13017 1502 aa31.14■■■□□ 2.58
COPS7A-208ENST00000538410 CAMSAP2Q08AD1 1489 aa31.12■■■□□ 2.57
COPS7A-208ENST00000538410 ZMYM4Q5VZL5 1548 aa31.11■■■□□ 2.57
COPS7A-208ENST00000538410 ARHGEF40Q8TER5 1519 aa31.09■■■□□ 2.57
COPS7A-208ENST00000538410 POGZQ7Z3K3 1410 aa31.09■■■□□ 2.57
COPS7A-208ENST00000538410 ZNF644Q9H582 1327 aaPredicted RBP31.08■■■□□ 2.57
COPS7A-208ENST00000538410 SAMD9LQ8IVG5 1584 aa31.07■■■□□ 2.56
COPS7A-208ENST00000538410 ITGAEP38570 1179 aa31.06■■■□□ 2.56
COPS7A-208ENST00000538410 ZNF777Q9ULD5 760 aaPredicted RBP31.06■■■□□ 2.56
COPS7A-208ENST00000538410 MAGI2Q86UL8 1455 aa31.05■■■□□ 2.56
COPS7A-208ENST00000538410 ZFYVE16Q7Z3T8 1539 aa31.04■■■□□ 2.56
COPS7A-208ENST00000538410 DNMT1P26358 1616 aaKnown RBP31.04■■■□□ 2.56
COPS7A-208ENST00000538410 ARID4BQ4LE39 1312 aaPredicted RBP31.04■■■□□ 2.56
COPS7A-208ENST00000538410 YEATS2Q9ULM3 1422 aa31■■■□□ 2.55
COPS7A-208ENST00000538410 ADAMTSL3P82987 1691 aa30.99■■■□□ 2.55
COPS7A-208ENST00000538410 BCORL1Q5H9F3 1711 aa30.98■■■□□ 2.55
COPS7A-208ENST00000538410 ZNF518AQ6AHZ1 1483 aa30.97■■■□□ 2.55
COPS7A-208ENST00000538410 CROCC2H7BZ55 1655 aa30.97■■■□□ 2.55
COPS7A-208ENST00000538410 DAPK1P53355 1430 aa30.96■■■□□ 2.55
COPS7A-208ENST00000538410 PTPRKQ15262 1439 aa30.96■■■□□ 2.55
COPS7A-208ENST00000538410 ARHGEF5Q12774 1597 aa30.95■■■□□ 2.55
COPS7A-208ENST00000538410 PLEKHH2Q8IVE3 1493 aa30.95■■■□□ 2.54
COPS7A-208ENST00000538410 AFAP1Q8N556 730 aa30.94■■■□□ 2.54
COPS7A-208ENST00000538410 ABCC5O15440 1437 aa30.93■■■□□ 2.54
COPS7A-208ENST00000538410 ABCC1P33527 1531 aa30.92■■■□□ 2.54
COPS7A-208ENST00000538410 KDM5CP41229 1560 aa30.91■■■□□ 2.54
COPS7A-208ENST00000538410 SYCP2Q9BX26 1530 aa30.91■■■□□ 2.54
COPS7A-208ENST00000538410 MBD5Q9P267 1494 aa30.91■■■□□ 2.54
COPS7A-208ENST00000538410 KIAA1107Q9UPP5 1409 aa30.9■■■□□ 2.54
COPS7A-208ENST00000538410 MYT1LQ9UL68 1186 aa30.88■■■□□ 2.53
COPS7A-208ENST00000538410 ATP10AO60312 1499 aa30.88■■■□□ 2.53
COPS7A-208ENST00000538410 ARHGEF12Q9NZN5 1544 aa30.88■■■□□ 2.53
COPS7A-208ENST00000538410 SIGLEC1Q9BZZ2 1709 aa30.88■■■□□ 2.53
COPS7A-208ENST00000538410 ADGBQ8N7X0 1667 aa30.87■■■□□ 2.53
COPS7A-208ENST00000538410 MADDQ8WXG6 1647 aa30.87■■■□□ 2.53
COPS7A-208ENST00000538410 HNRNPMP52272 730 aaKnown RBP eCLIP30.87■■■□□ 2.53
COPS7A-208ENST00000538410 HECW2Q9P2P5 1572 aa30.86■■■□□ 2.53
COPS7A-208ENST00000538410 PTPRMP28827 1452 aa30.85■■■□□ 2.53
COPS7A-208ENST00000538410 TRAPPC8Q9Y2L5 1435 aa30.85■■■□□ 2.53
COPS7A-208ENST00000538410 C9orf84Q5VXU9 1444 aa30.84■■■□□ 2.53
COPS7A-208ENST00000538410 CCDC141Q6ZP82 1450 aa30.84■■■□□ 2.53
COPS7A-208ENST00000538410 RSPH4AQ5TD94 716 aa30.83■■■□□ 2.53
COPS7A-208ENST00000538410 SHANK2Q9UPX8 1470 aa30.83■■■□□ 2.53
COPS7A-208ENST00000538410 MLH3Q9UHC1 1453 aa30.81■■■□□ 2.52
COPS7A-208ENST00000538410 CHIC2Q9UKJ5 165 aa30.8■■■□□ 2.52
COPS7A-208ENST00000538410 GCC2Q8IWJ2 1684 aa30.8■■■□□ 2.52
COPS7A-208ENST00000538410 RIMS1Q86UR5 1692 aaKnown RBP30.79■■■□□ 2.52
COPS7A-208ENST00000538410 HFM1A2PYH4 1435 aa30.78■■■□□ 2.52
COPS7A-208ENST00000538410 ROCK1Q13464 1354 aa30.78■■■□□ 2.52
COPS7A-208ENST00000538410 MLECQ14165 292 aa30.77■■■□□ 2.52
COPS7A-208ENST00000538410 SETD5Q9C0A6 1442 aa30.77■■■□□ 2.52
COPS7A-208ENST00000538410 DIP2CQ9Y2E4 1556 aa30.77■■■□□ 2.52
COPS7A-208ENST00000538410 MAST1Q9Y2H9 1570 aa30.76■■■□□ 2.51
COPS7A-208ENST00000538410 ADGRL2O95490 1459 aa30.76■■■□□ 2.51
COPS7A-208ENST00000538410 ABCA6Q8N139 1617 aa30.74■■■□□ 2.51
COPS7A-208ENST00000538410 TSPY4P0CV99 314 aa30.74■■■□□ 2.51
COPS7A-208ENST00000538410 TSPY10P0CW01 314 aa30.74■■■□□ 2.51
COPS7A-208ENST00000538410 NAIPQ13075 1403 aa30.73■■■□□ 2.51
COPS7A-208ENST00000538410 KIDINS220Q9ULH0 1771 aa30.72■■■□□ 2.51
COPS7A-208ENST00000538410 FER1L4A9Z1Z3 1794 aa30.71■■■□□ 2.51
COPS7A-208ENST00000538410 REREQ9P2R6 1566 aa30.7■■■□□ 2.51
COPS7A-208ENST00000538410 RRP7BPQ9NSQ0 103 aa30.7■■■□□ 2.51
COPS7A-208ENST00000538410 RAB3GAP2Q9H2M9 1393 aa30.7■■■□□ 2.5
COPS7A-208ENST00000538410 NCOA1Q15788 1441 aa30.69■■■□□ 2.5
COPS7A-208ENST00000538410 ANKRD30AQ9BXX3 1397 aa30.67■■■□□ 2.5
COPS7A-208ENST00000538410 SPAG9O60271 1321 aaKnown RBP30.67■■■□□ 2.5
COPS7A-208ENST00000538410 PLXNC1O60486 1568 aa30.63■■■□□ 2.49
COPS7A-208ENST00000538410 HRCP23327 699 aa30.62■■■□□ 2.49
COPS7A-208ENST00000538410 PLPPR3Q6T4P5 718 aa30.62■■■□□ 2.49
COPS7A-208ENST00000538410 INO80Q9ULG1 1556 aaPredicted RBP30.61■■■□□ 2.49
COPS7A-208ENST00000538410 AGLP35573 1532 aa30.61■■■□□ 2.49
COPS7A-208ENST00000538410 ATP7AQ04656 1500 aa30.6■■■□□ 2.49
COPS7A-208ENST00000538410 RTEL1-TNFRSF6BF6WH68 1400 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms