RNA–Protein interactions for RNA: ENST00000538046.6

KDM2B-206, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best) BASIC

Gene KDM2B, Length 2,301 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-206ENST00000538046 PPRC1Q5VV67 1664 aaKnown RBP13.85□□□□□ -0.19
KDM2B-206ENST00000538046 TEX14Q8IWB6 1497 aa13.85□□□□□ -0.19
KDM2B-206ENST00000538046 MAP3K1Q13233 1512 aa13.85□□□□□ -0.19
KDM2B-206ENST00000538046 MYO5CQ9NQX4 1742 aa13.83□□□□□ -0.2
KDM2B-206ENST00000538046 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
KDM2B-206ENST00000538046 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
KDM2B-206ENST00000538046 CCNB3Q8WWL7 1395 aa13.81□□□□□ -0.2
KDM2B-206ENST00000538046 PLCH2O75038 1416 aa13.81□□□□□ -0.2
KDM2B-206ENST00000538046 ARHGAP5Q13017 1502 aa13.81□□□□□ -0.2
KDM2B-206ENST00000538046 CLSPNQ9HAW4 1339 aa13.8□□□□□ -0.2
KDM2B-206ENST00000538046 FANCAO15360 1455 aa13.8□□□□□ -0.2
KDM2B-206ENST00000538046 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
KDM2B-206ENST00000538046 RRBP1Q9P2E9 1410 aaKnown RBP13.79□□□□□ -0.2
KDM2B-206ENST00000538046 PRKCSHP14314 528 aaPredicted RBP13.79□□□□□ -0.2
KDM2B-206ENST00000538046 ZNF777Q9ULD5 760 aaPredicted RBP13.79□□□□□ -0.2
KDM2B-206ENST00000538046 CDC42BPAQ5VT25 1732 aa13.78□□□□□ -0.2
KDM2B-206ENST00000538046 EFCAB2Q5VUJ9 269 aa13.78□□□□□ -0.2
KDM2B-206ENST00000538046 KDM6BO15054 1643 aa13.78□□□□□ -0.2
KDM2B-206ENST00000538046 CFDP1Q9UEE9 299 aaPredicted RBP13.78□□□□□ -0.2
KDM2B-206ENST00000538046 PREX2Q70Z35 1606 aa13.77□□□□□ -0.2
KDM2B-206ENST00000538046 CDC42BPBQ9Y5S2 1711 aa13.77□□□□□ -0.21
KDM2B-206ENST00000538046 GPATCH8Q9UKJ3 1502 aaKnown RBP13.77□□□□□ -0.21
KDM2B-206ENST00000538046 NEO1Q92859 1461 aa13.76□□□□□ -0.21
KDM2B-206ENST00000538046 AKNAQ7Z591 1439 aa13.76□□□□□ -0.21
KDM2B-206ENST00000538046 CFAP74Q9C0B2 1584 aa13.76□□□□□ -0.21
KDM2B-206ENST00000538046 ARAP3Q8WWN8 1544 aa13.75□□□□□ -0.21
KDM2B-206ENST00000538046 ITSN2Q9NZM3 1697 aa13.74□□□□□ -0.21
KDM2B-206ENST00000538046 ADGRL1O94910 1474 aa13.74□□□□□ -0.21
KDM2B-206ENST00000538046 COL17A1Q9UMD9 1497 aaPredicted RBP13.74□□□□□ -0.21
KDM2B-206ENST00000538046 RAPGEF3O95398 923 aa13.73□□□□□ -0.21
KDM2B-206ENST00000538046 PHLDB1Q86UU1 1377 aa13.73□□□□□ -0.21
KDM2B-206ENST00000538046 SCAPERQ9BY12 1400 aa13.71□□□□□ -0.21
KDM2B-206ENST00000538046 MYOM3Q5VTT5 1437 aa13.7□□□□□ -0.22
KDM2B-206ENST00000538046 ANP32EQ9BTT0 268 aa13.7□□□□□ -0.22
KDM2B-206ENST00000538046 ZNF644Q9H582 1327 aaPredicted RBP13.7□□□□□ -0.22
KDM2B-206ENST00000538046 DHX57Q6P158 1386 aaKnown RBP13.7□□□□□ -0.22
KDM2B-206ENST00000538046 DENND4BO75064 1496 aaPredicted RBP13.69□□□□□ -0.22
KDM2B-206ENST00000538046 SAMD9LQ8IVG5 1584 aa13.69□□□□□ -0.22
KDM2B-206ENST00000538046 HNRNPMP52272 730 aaKnown RBP eCLIP13.68□□□□□ -0.22
KDM2B-206ENST00000538046 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
KDM2B-206ENST00000538046 ABCC1P33527 1531 aa13.67□□□□□ -0.22
KDM2B-206ENST00000538046 SYCP2Q9BX26 1530 aa13.67□□□□□ -0.22
KDM2B-206ENST00000538046 AFAP1Q8N556 730 aa13.67□□□□□ -0.22
KDM2B-206ENST00000538046 CAMSAP2Q08AD1 1489 aa13.66□□□□□ -0.22
KDM2B-206ENST00000538046 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
KDM2B-206ENST00000538046 ARHGEF12Q9NZN5 1544 aa13.65□□□□□ -0.22
KDM2B-206ENST00000538046 RICTORQ6R327 1708 aa13.65□□□□□ -0.22
KDM2B-206ENST00000538046 PLEKHH2Q8IVE3 1493 aa13.65□□□□□ -0.22
KDM2B-206ENST00000538046 FGD6Q6ZV73 1430 aa13.65□□□□□ -0.23
KDM2B-206ENST00000538046 MIA2Q96PC5 1412 aa13.65□□□□□ -0.23
KDM2B-206ENST00000538046 ZNF518AQ6AHZ1 1483 aa13.64□□□□□ -0.23
KDM2B-206ENST00000538046 FRMPD1Q5SYB0 1578 aa13.64□□□□□ -0.23
KDM2B-206ENST00000538046 TRAPPC8Q9Y2L5 1435 aa13.64□□□□□ -0.23
KDM2B-206ENST00000538046 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
KDM2B-206ENST00000538046 YTHDC1Q96MU7 727 aaKnown RBP13.63□□□□□ -0.23
KDM2B-206ENST00000538046 KIAA1107Q9UPP5 1409 aa13.63□□□□□ -0.23
KDM2B-206ENST00000538046 PTPN23Q9H3S7 1636 aa13.62□□□□□ -0.23
KDM2B-206ENST00000538046 MIER1Q8N108 512 aa13.61□□□□□ -0.23
KDM2B-206ENST00000538046 MBD5Q9P267 1494 aa13.6□□□□□ -0.23
KDM2B-206ENST00000538046 SPAG9O60271 1321 aaKnown RBP13.59□□□□□ -0.23
KDM2B-206ENST00000538046 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
KDM2B-206ENST00000538046 ZMYM4Q5VZL5 1548 aa13.58□□□□□ -0.24
KDM2B-206ENST00000538046 KDM5CP41229 1560 aa13.58□□□□□ -0.24
KDM2B-206ENST00000538046 ITGAEP38570 1179 aa13.58□□□□□ -0.24
KDM2B-206ENST00000538046 YEATS2Q9ULM3 1422 aa13.58□□□□□ -0.24
KDM2B-206ENST00000538046 TSPY4P0CV99 314 aa13.57□□□□□ -0.24
KDM2B-206ENST00000538046 TSPY10P0CW01 314 aa13.57□□□□□ -0.24
KDM2B-206ENST00000538046 ZFYVE16Q7Z3T8 1539 aa13.57□□□□□ -0.24
KDM2B-206ENST00000538046 HECW2Q9P2P5 1572 aa13.57□□□□□ -0.24
KDM2B-206ENST00000538046 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
KDM2B-206ENST00000538046 TCOF1Q13428 1488 aaKnown RBP13.56□□□□□ -0.24
KDM2B-206ENST00000538046 MAGI2Q86UL8 1455 aa13.56□□□□□ -0.24
KDM2B-206ENST00000538046 SETD5Q9C0A6 1442 aa13.55□□□□□ -0.24
KDM2B-206ENST00000538046 RAB3GAP2Q9H2M9 1393 aa13.55□□□□□ -0.24
KDM2B-206ENST00000538046 ARHGEF5Q12774 1597 aa13.55□□□□□ -0.24
KDM2B-206ENST00000538046 ARHGEF40Q8TER5 1519 aa13.55□□□□□ -0.24
KDM2B-206ENST00000538046 MLH3Q9UHC1 1453 aa13.54□□□□□ -0.24
KDM2B-206ENST00000538046 ARID4BQ4LE39 1312 aaPredicted RBP13.54□□□□□ -0.24
KDM2B-206ENST00000538046 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
KDM2B-206ENST00000538046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.54□□□□□ -0.24
KDM2B-206ENST00000538046 ERICH6Q7L0X2 663 aa13.53□□□□□ -0.24
KDM2B-206ENST00000538046 CHIC2Q9UKJ5 165 aa13.53□□□□□ -0.24
KDM2B-206ENST00000538046 KIDINS220Q9ULH0 1771 aa13.53□□□□□ -0.24
KDM2B-206ENST00000538046 DAPK1P53355 1430 aa13.53□□□□□ -0.24
KDM2B-206ENST00000538046 ABCC5O15440 1437 aa13.52□□□□□ -0.24
KDM2B-206ENST00000538046 DNMT1P26358 1616 aaKnown RBP13.52□□□□□ -0.25
KDM2B-206ENST00000538046 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.25
KDM2B-206ENST00000538046 ABCA6Q8N139 1617 aa13.51□□□□□ -0.25
KDM2B-206ENST00000538046 INO80Q9ULG1 1556 aaPredicted RBP13.51□□□□□ -0.25
KDM2B-206ENST00000538046 ATP10AO60312 1499 aa13.51□□□□□ -0.25
KDM2B-206ENST00000538046 DIP2CQ9Y2E4 1556 aa13.5□□□□□ -0.25
KDM2B-206ENST00000538046 RTEL1-TNFRSF6BF6WH68 1400 aa13.49□□□□□ -0.25
KDM2B-206ENST00000538046 CROCC2H7BZ55 1655 aa13.49□□□□□ -0.25
KDM2B-206ENST00000538046 MLECQ14165 292 aa13.48□□□□□ -0.25
KDM2B-206ENST00000538046 RRP7BPQ9NSQ0 103 aa13.47□□□□□ -0.25
KDM2B-206ENST00000538046 SHANK2Q9UPX8 1470 aa13.47□□□□□ -0.25
KDM2B-206ENST00000538046 MAST1Q9Y2H9 1570 aa13.46□□□□□ -0.25
KDM2B-206ENST00000538046 A2MP01023 1474 aa13.46□□□□□ -0.26
KDM2B-206ENST00000538046 SIGLEC1Q9BZZ2 1709 aa13.45□□□□□ -0.26
KDM2B-206ENST00000538046 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms