RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 ARHGAP5Q13017 1502 aa37.31■■■■□ 3.56
HMGA2-207ENST00000537275 MIA2Q96PC5 1412 aa37.31■■■■□ 3.56
HMGA2-207ENST00000537275 PPRC1Q5VV67 1664 aaKnown RBP37.3■■■■□ 3.56
HMGA2-207ENST00000537275 TSPOAP1O95153 1857 aa37.3■■■■□ 3.56
HMGA2-207ENST00000537275 FGD6Q6ZV73 1430 aa37.28■■■■□ 3.56
HMGA2-207ENST00000537275 EFCAB2Q5VUJ9 269 aa37.27■■■■□ 3.56
HMGA2-207ENST00000537275 FANCAO15360 1455 aa37.26■■■■□ 3.56
HMGA2-207ENST00000537275 TEX14Q8IWB6 1497 aa37.22■■■■□ 3.55
HMGA2-207ENST00000537275 CFAP74Q9C0B2 1584 aa37.2■■■■□ 3.55
HMGA2-207ENST00000537275 ZNF777Q9ULD5 760 aaPredicted RBP37.2■■■■□ 3.55
HMGA2-207ENST00000537275 NEO1Q92859 1461 aa37.19■■■■□ 3.54
HMGA2-207ENST00000537275 RRBP1Q9P2E9 1410 aaKnown RBP37.19■■■■□ 3.54
HMGA2-207ENST00000537275 SAMD9LQ8IVG5 1584 aa37.18■■■■□ 3.54
HMGA2-207ENST00000537275 PTPN23Q9H3S7 1636 aa37.18■■■■□ 3.54
HMGA2-207ENST00000537275 ZNF644Q9H582 1327 aaPredicted RBP37.18■■■■□ 3.54
HMGA2-207ENST00000537275 TCOF1Q13428 1488 aaKnown RBP37.15■■■■□ 3.54
HMGA2-207ENST00000537275 AKNAQ7Z591 1439 aa37.15■■■■□ 3.54
HMGA2-207ENST00000537275 CAMSAP2Q08AD1 1489 aa37.14■■■■□ 3.54
HMGA2-207ENST00000537275 ABCC1P33527 1531 aa37.09■■■■□ 3.53
HMGA2-207ENST00000537275 PLEKHH2Q8IVE3 1493 aa37.09■■■■□ 3.53
HMGA2-207ENST00000537275 KIAA1107Q9UPP5 1409 aa37.08■■■■□ 3.53
HMGA2-207ENST00000537275 ADGRL1O94910 1474 aa37.07■■■■□ 3.53
HMGA2-207ENST00000537275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.07■■■■□ 3.53
HMGA2-207ENST00000537275 FAM50AQ14320 339 aaKnown RBP37.05■■■■□ 3.52
HMGA2-207ENST00000537275 ARHGEF12Q9NZN5 1544 aa37.04■■■■□ 3.52
HMGA2-207ENST00000537275 SCAPERQ9BY12 1400 aa37.03■■■■□ 3.52
HMGA2-207ENST00000537275 SYCP2Q9BX26 1530 aa37.03■■■■□ 3.52
HMGA2-207ENST00000537275 HNRNPMP52272 730 aaKnown RBP eCLIP37.02■■■■□ 3.522e-8■■□□□ 11.6
HMGA2-207ENST00000537275 MBD5Q9P267 1494 aa37.02■■■■□ 3.52
HMGA2-207ENST00000537275 ARHGEF5Q12774 1597 aa36.95■■■■□ 3.51
HMGA2-207ENST00000537275 TRAPPC8Q9Y2L5 1435 aa36.94■■■■□ 3.5
HMGA2-207ENST00000537275 RSPH4AQ5TD94 716 aa36.94■■■■□ 3.5
HMGA2-207ENST00000537275 DENND4BO75064 1496 aaPredicted RBP36.94■■■■□ 3.5
HMGA2-207ENST00000537275 COL17A1Q9UMD9 1497 aaPredicted RBP36.92■■■■□ 3.5
HMGA2-207ENST00000537275 DNMT1P26358 1616 aaKnown RBP36.91■■■■□ 3.5
HMGA2-207ENST00000537275 POGZQ7Z3K3 1410 aa36.9■■■■□ 3.5
HMGA2-207ENST00000537275 CCDC141Q6ZP82 1450 aa36.89■■■■□ 3.5
HMGA2-207ENST00000537275 ABCC5O15440 1437 aa36.89■■■■□ 3.5
HMGA2-207ENST00000537275 ZNF518AQ6AHZ1 1483 aa36.88■■■■□ 3.49
HMGA2-207ENST00000537275 DAPK1P53355 1430 aa36.88■■■■□ 3.49
HMGA2-207ENST00000537275 AFAP1Q8N556 730 aa36.88■■■■□ 3.49
HMGA2-207ENST00000537275 RAPGEF3O95398 923 aa36.87■■■■□ 3.49
HMGA2-207ENST00000537275 RICTORQ6R327 1708 aa36.87■■■■□ 3.49
HMGA2-207ENST00000537275 TRIM26Q12899 539 aaPredicted RBP36.86■■■■□ 3.49
HMGA2-207ENST00000537275 FRMPD1Q5SYB0 1578 aa36.83■■■■□ 3.49
HMGA2-207ENST00000537275 KDM6BO15054 1643 aa36.82■■■■□ 3.48
HMGA2-207ENST00000537275 KDM5CP41229 1560 aa36.81■■■■□ 3.48
HMGA2-207ENST00000537275 CROCC2H7BZ55 1655 aa36.81■■■■□ 3.48
HMGA2-207ENST00000537275 ITGAEP38570 1179 aa36.8■■■■□ 3.48
HMGA2-207ENST00000537275 PTPRKQ15262 1439 aa36.8■■■■□ 3.48
HMGA2-207ENST00000537275 TSPY4P0CV99 314 aa36.8■■■■□ 3.48
HMGA2-207ENST00000537275 TSPY10P0CW01 314 aa36.8■■■■□ 3.48
HMGA2-207ENST00000537275 SHANK2Q9UPX8 1470 aa36.77■■■■□ 3.48
HMGA2-207ENST00000537275 MAST1Q9Y2H9 1570 aa36.74■■■■□ 3.47
HMGA2-207ENST00000537275 SPAG9O60271 1321 aaKnown RBP36.74■■■■□ 3.47
HMGA2-207ENST00000537275 C9orf84Q5VXU9 1444 aa36.74■■■■□ 3.47
HMGA2-207ENST00000537275 ZMYM4Q5VZL5 1548 aa36.73■■■■□ 3.47
HMGA2-207ENST00000537275 MLH3Q9UHC1 1453 aa36.72■■■■□ 3.47
HMGA2-207ENST00000537275 RTEL1-TNFRSF6BF6WH68 1400 aa36.71■■■■□ 3.47
HMGA2-207ENST00000537275 CHIC2Q9UKJ5 165 aa36.69■■■■□ 3.46
HMGA2-207ENST00000537275 MYT1LQ9UL68 1186 aa36.69■■■■□ 3.46
HMGA2-207ENST00000537275 HECW2Q9P2P5 1572 aa36.69■■■■□ 3.46
HMGA2-207ENST00000537275 INO80Q9ULG1 1556 aaPredicted RBP36.69■■■■□ 3.46
HMGA2-207ENST00000537275 ZFYVE16Q7Z3T8 1539 aa36.68■■■■□ 3.46
HMGA2-207ENST00000537275 ATP7AQ04656 1500 aa36.67■■■■□ 3.46
HMGA2-207ENST00000537275 KIDINS220Q9ULH0 1771 aa36.66■■■■□ 3.46
HMGA2-207ENST00000537275 ADGRL2O95490 1459 aa36.66■■■■□ 3.46
HMGA2-207ENST00000537275 MAGI2Q86UL8 1455 aa36.65■■■■□ 3.46
HMGA2-207ENST00000537275 ADGBQ8N7X0 1667 aa36.63■■■■□ 3.45
HMGA2-207ENST00000537275 ROCK1Q13464 1354 aa36.62■■■■□ 3.45
HMGA2-207ENST00000537275 NCOA1Q15788 1441 aa36.62■■■■□ 3.45
HMGA2-207ENST00000537275 ANKRD30AQ9BXX3 1397 aa36.6■■■■□ 3.45
HMGA2-207ENST00000537275 PLXNC1O60486 1568 aa36.58■■■■□ 3.45
HMGA2-207ENST00000537275 YEATS2Q9ULM3 1422 aa36.57■■■■□ 3.45
HMGA2-207ENST00000537275 ABCA6Q8N139 1617 aa36.54■■■■□ 3.44
HMGA2-207ENST00000537275 RRP7BPQ9NSQ0 103 aa36.54■■■■□ 3.44
HMGA2-207ENST00000537275 DIP2CQ9Y2E4 1556 aa36.51■■■■□ 3.44
HMGA2-207ENST00000537275 KIF15Q9NS87 1388 aa36.51■■■■□ 3.43
HMGA2-207ENST00000537275 ARHGEF40Q8TER5 1519 aa36.49■■■■□ 3.43
HMGA2-207ENST00000537275 PCGF6Q9BYE7 350 aa36.49■■■■□ 3.43
HMGA2-207ENST00000537275 HFM1A2PYH4 1435 aa36.48■■■■□ 3.43
HMGA2-207ENST00000537275 NAIPQ13075 1403 aa36.45■■■■□ 3.43
HMGA2-207ENST00000537275 DUOX2Q9NRD8 1548 aa36.45■■■■□ 3.42
HMGA2-207ENST00000537275 ATP10AO60312 1499 aa36.45■■■■□ 3.42
HMGA2-207ENST00000537275 A2MP01023 1474 aa36.42■■■■□ 3.42
HMGA2-207ENST00000537275 DHX29Q7Z478 1369 aaKnown RBP36.42■■■■□ 3.42
HMGA2-207ENST00000537275 GCC2Q8IWJ2 1684 aa36.42■■■■□ 3.42
HMGA2-207ENST00000537275 REREQ9P2R6 1566 aa36.39■■■■□ 3.42
HMGA2-207ENST00000537275 ANKRD50Q9ULJ7 1429 aa36.37■■■■□ 3.41
HMGA2-207ENST00000537275 ERBINQ96RT1 1412 aa36.35■■■■□ 3.41
HMGA2-207ENST00000537275 SETD5Q9C0A6 1442 aa36.35■■■■□ 3.41
HMGA2-207ENST00000537275 SIGLEC1Q9BZZ2 1709 aa36.28■■■■□ 3.4
HMGA2-207ENST00000537275 EIF2AK4Q9P2K8 1649 aaKnown RBP36.28■■■■□ 3.4
HMGA2-207ENST00000537275 AGLP35573 1532 aa36.26■■■■□ 3.4
HMGA2-207ENST00000537275 RAB3GAP2Q9H2M9 1393 aa36.24■■■■□ 3.39
HMGA2-207ENST00000537275 BCORL1Q5H9F3 1711 aa36.24■■■■□ 3.39
HMGA2-207ENST00000537275 KIF3BO15066 747 aa36.23■■■■□ 3.39
HMGA2-207ENST00000537275 ARID4BQ4LE39 1312 aaPredicted RBP36.2■■■■□ 3.38
HMGA2-207ENST00000537275 HRCP23327 699 aa36.18■■■■□ 3.38
HMGA2-207ENST00000537275 DEPDC5O75140 1603 aa36.14■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms