RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 CCNB3Q8WWL7 1395 aa15.4■□□□□ 0.06
RPS3-219ENST00000534440 PPP6R1Q9UPN7 881 aa15.4■□□□□ 0.06
RPS3-219ENST00000534440 CDK11AQ9UQ88 783 aaPredicted RBP15.39■□□□□ 0.05
RPS3-219ENST00000534440 TTC37Q6PGP7 1564 aa15.36■□□□□ 0.05
RPS3-219ENST00000534440 PLEKHD1A6NEE1 506 aa15.36■□□□□ 0.05
RPS3-219ENST00000534440 ILDR1Q86SU0 546 aaPredicted RBP15.36■□□□□ 0.05
RPS3-219ENST00000534440 PTPN23Q9H3S7 1636 aa15.35■□□□□ 0.05
RPS3-219ENST00000534440 CD109Q6YHK3 1445 aa15.35■□□□□ 0.05
RPS3-219ENST00000534440 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
RPS3-219ENST00000534440 CDC42BPAQ5VT25 1732 aa15.35■□□□□ 0.05
RPS3-219ENST00000534440 TCOF1Q13428 1488 aaKnown RBP15.34■□□□□ 0.05
RPS3-219ENST00000534440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.34■□□□□ 0.054e-23■□□□□ 10.1
RPS3-219ENST00000534440 GPATCH8Q9UKJ3 1502 aaKnown RBP15.34■□□□□ 0.05
RPS3-219ENST00000534440 KCNH8Q96L42 1107 aa15.33■□□□□ 0.04
RPS3-219ENST00000534440 MIA2Q96PC5 1412 aa15.32■□□□□ 0.04
RPS3-219ENST00000534440 PREX2Q70Z35 1606 aa15.32■□□□□ 0.04
RPS3-219ENST00000534440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.3■□□□□ 0.04
RPS3-219ENST00000534440 CDC42BPBQ9Y5S2 1711 aa15.29■□□□□ 0.04
RPS3-219ENST00000534440 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.04
RPS3-219ENST00000534440 MYO5CQ9NQX4 1742 aa15.27■□□□□ 0.04
RPS3-219ENST00000534440 FAM50AQ14320 339 aaKnown RBP15.27■□□□□ 0.04
RPS3-219ENST00000534440 ABCA9Q8IUA7 1624 aa15.26■□□□□ 0.03
RPS3-219ENST00000534440 PTPRKQ15262 1439 aa15.26■□□□□ 0.03
RPS3-219ENST00000534440 ARAP3Q8WWN8 1544 aa15.25■□□□□ 0.03
RPS3-219ENST00000534440 SAMD9LQ8IVG5 1584 aa15.24■□□□□ 0.03
RPS3-219ENST00000534440 HECW2Q9P2P5 1572 aa15.24■□□□□ 0.03
RPS3-219ENST00000534440 ZNF644Q9H582 1327 aaPredicted RBP15.24■□□□□ 0.03
RPS3-219ENST00000534440 DNMT1P26358 1616 aaKnown RBP15.23■□□□□ 0.03
RPS3-219ENST00000534440 ITGAEP38570 1179 aa15.22■□□□□ 0.03
RPS3-219ENST00000534440 CFDP1Q9UEE9 299 aaPredicted RBP15.21■□□□□ 0.03
RPS3-219ENST00000534440 ARHGAP5Q13017 1502 aa15.21■□□□□ 0.03
RPS3-219ENST00000534440 CROCC2H7BZ55 1655 aa15.2■□□□□ 0.02
RPS3-219ENST00000534440 PLCH2O75038 1416 aa15.19■□□□□ 0.02
RPS3-219ENST00000534440 ABCC5O15440 1437 aa15.18■□□□□ 0.02
RPS3-219ENST00000534440 DAPK1P53355 1430 aa15.18■□□□□ 0.02
RPS3-219ENST00000534440 RAPGEF3O95398 923 aa15.18■□□□□ 0.02
RPS3-219ENST00000534440 SYCP2Q9BX26 1530 aa15.17■□□□□ 0.02
RPS3-219ENST00000534440 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
RPS3-219ENST00000534440 ABCC1P33527 1531 aa15.16■□□□□ 0.02
RPS3-219ENST00000534440 ARHGEF5Q12774 1597 aa15.15■□□□□ 0.02
RPS3-219ENST00000534440 MBD5Q9P267 1494 aa15.15■□□□□ 0.02
RPS3-219ENST00000534440 ARHGEF12Q9NZN5 1544 aa15.14■□□□□ 0.01
RPS3-219ENST00000534440 GCC2Q8IWJ2 1684 aa15.13■□□□□ 0.01
RPS3-219ENST00000534440 NEO1Q92859 1461 aa15.13■□□□□ 0.01
RPS3-219ENST00000534440 HFM1A2PYH4 1435 aa15.12■□□□□ 0.01
RPS3-219ENST00000534440 AKNAQ7Z591 1439 aa15.12■□□□□ 0.01
RPS3-219ENST00000534440 SHANK2Q9UPX8 1470 aa15.12■□□□□ 0.01
RPS3-219ENST00000534440 ADGBQ8N7X0 1667 aa15.12■□□□□ 0.01
RPS3-219ENST00000534440 FANCAO15360 1455 aa15.11■□□□□ 0.01
RPS3-219ENST00000534440 NAIPQ13075 1403 aa15.1■□□□□ 0.01
RPS3-219ENST00000534440 PTPRMP28827 1452 aa15.1■□□□□ 0.01
RPS3-219ENST00000534440 CCDC141Q6ZP82 1450 aa15.1■□□□□ 0.01
RPS3-219ENST00000534440 PLEKHH2Q8IVE3 1493 aa15.1■□□□□ 0.01
RPS3-219ENST00000534440 RAB3GAP2Q9H2M9 1393 aa15.1■□□□□ 0.01
RPS3-219ENST00000534440 SETD5Q9C0A6 1442 aa15.09■□□□□ 0.01
RPS3-219ENST00000534440 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
RPS3-219ENST00000534440 ADGRL2O95490 1459 aa15.09■□□□□ 0.01
RPS3-219ENST00000534440 CHIC2Q9UKJ5 165 aa15.08■□□□□ 0
RPS3-219ENST00000534440 C9orf84Q5VXU9 1444 aa15.08■□□□□ 0
RPS3-219ENST00000534440 MAST1Q9Y2H9 1570 aa15.07■□□□□ 0
RPS3-219ENST00000534440 HNRNPMP52272 730 aaKnown RBP eCLIP15.07■□□□□ 02e-6■□□□□ 10
RPS3-219ENST00000534440 EFCAB2Q5VUJ9 269 aa15.07■□□□□ 0
RPS3-219ENST00000534440 ROCK1Q13464 1354 aa15.07■□□□□ 0
RPS3-219ENST00000534440 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
RPS3-219ENST00000534440 PIAS4Q8N2W9 510 aaPredicted RBP15.06■□□□□ 0
RPS3-219ENST00000534440 TRAPPC8Q9Y2L5 1435 aa15.06■□□□□ 0
RPS3-219ENST00000534440 FRMPD1Q5SYB0 1578 aa15.06■□□□□ 0
RPS3-219ENST00000534440 ADAMTSL3P82987 1691 aa15.06■□□□□ 0
RPS3-219ENST00000534440 RRP7BPQ9NSQ0 103 aa15.04■□□□□ -0
RPS3-219ENST00000534440 NCOA1Q15788 1441 aa15.03■□□□□ -0
RPS3-219ENST00000534440 FBXO41Q8TF61 875 aa15.03■□□□□ -0
RPS3-219ENST00000534440 PLXNC1O60486 1568 aa15.02□□□□□ -0.01
RPS3-219ENST00000534440 ZFYVE16Q7Z3T8 1539 aa15.02□□□□□ -0.01
RPS3-219ENST00000534440 DENND4BO75064 1496 aaPredicted RBP15.01□□□□□ -0.01
RPS3-219ENST00000534440 DHX57Q6P158 1386 aaKnown RBP15.01□□□□□ -0.01
RPS3-219ENST00000534440 INO80Q9ULG1 1556 aaPredicted RBP15.01□□□□□ -0.01
RPS3-219ENST00000534440 SCAPERQ9BY12 1400 aa15□□□□□ -0.01
RPS3-219ENST00000534440 ARID4BQ4LE39 1312 aaPredicted RBP15□□□□□ -0.01
RPS3-219ENST00000534440 LMTK3Q96Q04 1460 aa15□□□□□ -0.01
RPS3-219ENST00000534440 ANKRD30AQ9BXX3 1397 aa14.98□□□□□ -0.01
RPS3-219ENST00000534440 POGZQ7Z3K3 1410 aa14.98□□□□□ -0.01
RPS3-219ENST00000534440 KDM5CP41229 1560 aa14.98□□□□□ -0.01
RPS3-219ENST00000534440 BCORL1Q5H9F3 1711 aa14.97□□□□□ -0.01
RPS3-219ENST00000534440 KIF15Q9NS87 1388 aa14.97□□□□□ -0.01
RPS3-219ENST00000534440 ARHGEF40Q8TER5 1519 aa14.97□□□□□ -0.01
RPS3-219ENST00000534440 HRCP23327 699 aa14.96□□□□□ -0.01
RPS3-219ENST00000534440 RSPH4AQ5TD94 716 aa14.96□□□□□ -0.01
RPS3-219ENST00000534440 CCER1Q8TC90 406 aaPredicted RBP14.96□□□□□ -0.01
RPS3-219ENST00000534440 ATP7AQ04656 1500 aa14.96□□□□□ -0.02
RPS3-219ENST00000534440 RICTORQ6R327 1708 aa14.95□□□□□ -0.02
RPS3-219ENST00000534440 YEATS2Q9ULM3 1422 aa14.95□□□□□ -0.02
RPS3-219ENST00000534440 AFAP1Q8N556 730 aa14.95□□□□□ -0.02
RPS3-219ENST00000534440 MADDQ8WXG6 1647 aa14.95□□□□□ -0.02
RPS3-219ENST00000534440 ZNF518AQ6AHZ1 1483 aa14.95□□□□□ -0.02
RPS3-219ENST00000534440 KIDINS220Q9ULH0 1771 aa14.94□□□□□ -0.02
RPS3-219ENST00000534440 TSPY4P0CV99 314 aa14.94□□□□□ -0.02
RPS3-219ENST00000534440 TSPY10P0CW01 314 aa14.94□□□□□ -0.02
RPS3-219ENST00000534440 RTEL1-TNFRSF6BF6WH68 1400 aa14.93□□□□□ -0.02
RPS3-219ENST00000534440 ANKRD50Q9ULJ7 1429 aa14.93□□□□□ -0.02
RPS3-219ENST00000534440 ZMYM4Q5VZL5 1548 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms