RNA–Protein interactions for RNA: ENST00000534286.5

SORL1-212, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-212ENST00000534286 CCNB3Q8WWL7 1395 aa11.3□□□□□ -0.6
SORL1-212ENST00000534286 FAM50AQ14320 339 aaKnown RBP11.3□□□□□ -0.6
SORL1-212ENST00000534286 STAC3Q96MF2 364 aa11.3□□□□□ -0.6
SORL1-212ENST00000534286 FTSJ3Q8IY81 847 aaKnown RBP11.29□□□□□ -0.6
SORL1-212ENST00000534286 RAB3GAP2Q9H2M9 1393 aa11.29□□□□□ -0.6
SORL1-212ENST00000534286 TEX2Q8IWB9 1127 aa11.28□□□□□ -0.6
SORL1-212ENST00000534286 RAD54L2Q9Y4B4 1467 aa11.28□□□□□ -0.6
SORL1-212ENST00000534286 KIF21AQ7Z4S6 1674 aa11.28□□□□□ -0.6
SORL1-212ENST00000534286 RRP9O43818 475 aaKnown RBP11.28□□□□□ -0.6
SORL1-212ENST00000534286 CNGB1Q14028 1251 aaPredicted RBP11.28□□□□□ -0.6
SORL1-212ENST00000534286 C11orf95C9JLR9 678 aaPredicted RBP11.27□□□□□ -0.61
SORL1-212ENST00000534286 P3H3Q8IVL6 736 aa11.26□□□□□ -0.61
SORL1-212ENST00000534286 ABCA5Q8WWZ7 1642 aa11.26□□□□□ -0.61
SORL1-212ENST00000534286 IGSF3O75054 1194 aa11.25□□□□□ -0.61
SORL1-212ENST00000534286 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
SORL1-212ENST00000534286 RRBP1Q9P2E9 1410 aaKnown RBP11.24□□□□□ -0.61
SORL1-212ENST00000534286 PRDM4Q9UKN5 801 aa11.24□□□□□ -0.61
SORL1-212ENST00000534286 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
SORL1-212ENST00000534286 NCLP19338 710 aaKnown RBP11.23□□□□□ -0.61
SORL1-212ENST00000534286 WWC1Q8IX03 1113 aa11.23□□□□□ -0.61
SORL1-212ENST00000534286 CTTNBP2Q8WZ74 1663 aa11.23□□□□□ -0.61
SORL1-212ENST00000534286 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
SORL1-212ENST00000534286 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
SORL1-212ENST00000534286 KCNG1Q9UIX4 513 aa11.22□□□□□ -0.61
SORL1-212ENST00000534286 DNAJC5BQ9UF47 199 aa11.21□□□□□ -0.62
SORL1-212ENST00000534286 EFCAB5A4FU69 1503 aa11.2□□□□□ -0.62
SORL1-212ENST00000534286 TARBP1Q13395 1621 aaKnown RBP11.2□□□□□ -0.62
SORL1-212ENST00000534286 MAPKBP1O60336 1514 aa11.2□□□□□ -0.62
SORL1-212ENST00000534286 CCDC9Q9Y3X0 531 aaKnown RBP11.19□□□□□ -0.62
SORL1-212ENST00000534286 ANP32CO43423 234 aa11.19□□□□□ -0.62
SORL1-212ENST00000534286 HSP90AA1P07900 732 aaKnown RBP11.19□□□□□ -0.62
SORL1-212ENST00000534286 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
SORL1-212ENST00000534286 PPP1R15AO75807 674 aaPredicted RBP11.19□□□□□ -0.62
SORL1-212ENST00000534286 PAK3O75914 559 aaPredicted RBP11.18□□□□□ -0.62
SORL1-212ENST00000534286 GAPVD1Q14C86 1478 aa11.18□□□□□ -0.62
SORL1-212ENST00000534286 FHAD1B1AJZ9 1412 aa11.17□□□□□ -0.62
SORL1-212ENST00000534286 TIAM1Q13009 1591 aa11.17□□□□□ -0.62
SORL1-212ENST00000534286 NEFMP07197 916 aa11.16□□□□□ -0.62
SORL1-212ENST00000534286 CFAP43Q8NDM7 1665 aa11.16□□□□□ -0.62
SORL1-212ENST00000534286 MRC2Q9UBG0 1479 aa11.16□□□□□ -0.62
SORL1-212ENST00000534286 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
SORL1-212ENST00000534286 TMEM132AQ24JP5 1023 aa11.16□□□□□ -0.62
SORL1-212ENST00000534286 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
SORL1-212ENST00000534286 PHLDB1Q86UU1 1377 aa11.15□□□□□ -0.62
SORL1-212ENST00000534286 CALD1Q05682 793 aaKnown RBP11.15□□□□□ -0.62
SORL1-212ENST00000534286 ZNF830Q96NB3 372 aaPredicted RBP11.14□□□□□ -0.63
SORL1-212ENST00000534286 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
SORL1-212ENST00000534286 AQRO60306 1485 aaKnown RBP eCLIP11.14□□□□□ -0.632e-6■■■■□ 25.1
SORL1-212ENST00000534286 HNRNPUQ00839 825 aaKnown RBP eCLIP11.13□□□□□ -0.63
SORL1-212ENST00000534286 PCF11O94913 1555 aaKnown RBP11.13□□□□□ -0.63
SORL1-212ENST00000534286 TDRD9Q8NDG6 1382 aaKnown RBP11.13□□□□□ -0.63
SORL1-212ENST00000534286 FAM43AQ8N2R8 423 aa11.12□□□□□ -0.63
SORL1-212ENST00000534286 VGLL3A8MV65 326 aa11.12□□□□□ -0.63
SORL1-212ENST00000534286 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
SORL1-212ENST00000534286 SAMD9Q5K651 1589 aa11.12□□□□□ -0.63
SORL1-212ENST00000534286 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
SORL1-212ENST00000534286 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.11□□□□□ -0.63
SORL1-212ENST00000534286 WDR62O43379 1518 aa11.11□□□□□ -0.63
SORL1-212ENST00000534286 WASHC2CQ9Y4E1 1318 aa11.11□□□□□ -0.63
SORL1-212ENST00000534286 LRRC9Q6ZRR7 1453 aa11.1□□□□□ -0.63
SORL1-212ENST00000534286 ZNF592Q92610 1267 aa11.1□□□□□ -0.63
SORL1-212ENST00000534286 CASKIN1Q8WXD9 1431 aa11.09□□□□□ -0.63
SORL1-212ENST00000534286 ADAMTS12P58397 1594 aa11.08□□□□□ -0.64
SORL1-212ENST00000534286 PATL2C9JE40 543 aaKnown RBP11.08□□□□□ -0.64
SORL1-212ENST00000534286 FHOD3Q2V2M9 1422 aa11.08□□□□□ -0.64
SORL1-212ENST00000534286 FMN1Q68DA7 1419 aa11.07□□□□□ -0.64
SORL1-212ENST00000534286 CCER2I3L3R5 266 aa11.07□□□□□ -0.64
SORL1-212ENST00000534286 WASHC2AQ641Q2 1341 aa11.07□□□□□ -0.64
SORL1-212ENST00000534286 TONSLQ96HA7 1378 aa11.07□□□□□ -0.64
SORL1-212ENST00000534286 IFT140Q96RY7 1462 aa11.07□□□□□ -0.64
SORL1-212ENST00000534286 PPM1GO15355 546 aaPredicted RBP11.06□□□□□ -0.64
SORL1-212ENST00000534286 TICAM2Q86XR7 235 aa11.06□□□□□ -0.64
SORL1-212ENST00000534286 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
SORL1-212ENST00000534286 SNAPC4Q5SXM2 1469 aa11.05□□□□□ -0.64
SORL1-212ENST00000534286 FAM43BQ6ZT52 329 aaPredicted RBP11.05□□□□□ -0.64
SORL1-212ENST00000534286 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
SORL1-212ENST00000534286 SENP3-EIF4A1A0A087X0R7 540 aa11.04□□□□□ -0.64
SORL1-212ENST00000534286 ARID4BQ4LE39 1312 aaPredicted RBP11.03□□□□□ -0.64
SORL1-212ENST00000534286 MAPK8IP2Q13387 824 aaPredicted RBP11.03□□□□□ -0.64
SORL1-212ENST00000534286 CCDC184Q52MB2 194 aa11.03□□□□□ -0.64
SORL1-212ENST00000534286 FAM193AP78312 1265 aa11.02□□□□□ -0.64
SORL1-212ENST00000534286 IQGAP2Q13576 1575 aa11.02□□□□□ -0.65
SORL1-212ENST00000534286 FAM9BQ8IZU0 186 aa11.01□□□□□ -0.65
SORL1-212ENST00000534286 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
SORL1-212ENST00000534286 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
SORL1-212ENST00000534286 LRRIQ1Q96JM4 1722 aa11.01□□□□□ -0.65
SORL1-212ENST00000534286 TMEM51Q9NW97 253 aa11.01□□□□□ -0.65
SORL1-212ENST00000534286 ZHX1Q9UKY1 873 aaPredicted RBP11□□□□□ -0.65
SORL1-212ENST00000534286 CHIC2Q9UKJ5 165 aa11□□□□□ -0.65
SORL1-212ENST00000534286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.98□□□□□ -0.65
SORL1-212ENST00000534286 ZNF608Q9ULD9 1512 aaPredicted RBP10.98□□□□□ -0.65
SORL1-212ENST00000534286 EIF4G3O43432 1585 aaKnown RBP10.98□□□□□ -0.65
SORL1-212ENST00000534286 RRP7BPQ9NSQ0 103 aa10.98□□□□□ -0.65
SORL1-212ENST00000534286 UGGT2Q9NYU1 1516 aa10.97□□□□□ -0.65
SORL1-212ENST00000534286 ZBTB47Q9UFB7 747 aaPredicted RBP10.97□□□□□ -0.65
SORL1-212ENST00000534286 ERCC6Q03468 1493 aa10.97□□□□□ -0.65
SORL1-212ENST00000534286 HSPA5P11021 654 aaKnown RBP10.97□□□□□ -0.65
SORL1-212ENST00000534286 PLCD4Q9BRC7 762 aa10.96□□□□□ -0.65
SORL1-212ENST00000534286 SOX12O15370 315 aa10.96□□□□□ -0.66
SORL1-212ENST00000534286 IRX3P78415 501 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms