RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 PREX2Q70Z35 1606 aa26.95■■□□□ 1.91
NXF1-216ENST00000533499 FANCAO15360 1455 aa26.94■■□□□ 1.9
NXF1-216ENST00000533499 CDC42BPBQ9Y5S2 1711 aa26.94■■□□□ 1.9
NXF1-216ENST00000533499 ITSN2Q9NZM3 1697 aa26.94■■□□□ 1.9
NXF1-216ENST00000533499 PHLDB1Q86UU1 1377 aa26.9■■□□□ 1.9
NXF1-216ENST00000533499 CFAP74Q9C0B2 1584 aa26.88■■□□□ 1.89
NXF1-216ENST00000533499 MYOM3Q5VTT5 1437 aa26.88■■□□□ 1.89
NXF1-216ENST00000533499 ARAP3Q8WWN8 1544 aa26.87■■□□□ 1.89
NXF1-216ENST00000533499 AKNAQ7Z591 1439 aa26.87■■□□□ 1.89
NXF1-216ENST00000533499 NEO1Q92859 1461 aa26.87■■□□□ 1.89
NXF1-216ENST00000533499 ZNF644Q9H582 1327 aaPredicted RBP26.84■■□□□ 1.89
NXF1-216ENST00000533499 ADGRL1O94910 1474 aa26.83■■□□□ 1.89
NXF1-216ENST00000533499 KDM6BO15054 1643 aa26.8■■□□□ 1.88
NXF1-216ENST00000533499 SCAPERQ9BY12 1400 aa26.8■■□□□ 1.88
NXF1-216ENST00000533499 SAMD9LQ8IVG5 1584 aa26.8■■□□□ 1.88
NXF1-216ENST00000533499 FAM50AQ14320 339 aaKnown RBP26.78■■□□□ 1.88
NXF1-216ENST00000533499 FGD6Q6ZV73 1430 aa26.78■■□□□ 1.88
NXF1-216ENST00000533499 MIA2Q96PC5 1412 aa26.77■■□□□ 1.88
NXF1-216ENST00000533499 HNRNPMP52272 730 aaKnown RBP eCLIP26.77■■□□□ 1.88
NXF1-216ENST00000533499 CAMSAP2Q08AD1 1489 aa26.76■■□□□ 1.87
NXF1-216ENST00000533499 RAPGEF3O95398 923 aa26.76■■□□□ 1.87
NXF1-216ENST00000533499 DENND4BO75064 1496 aaPredicted RBP26.74■■□□□ 1.87
NXF1-216ENST00000533499 MYT1LQ9UL68 1186 aa26.74■■□□□ 1.87
NXF1-216ENST00000533499 PTPN23Q9H3S7 1636 aa26.74■■□□□ 1.87
NXF1-216ENST00000533499 ABCC1P33527 1531 aa26.74■■□□□ 1.87
NXF1-216ENST00000533499 SYCP2Q9BX26 1530 aa26.74■■□□□ 1.87
NXF1-216ENST00000533499 PLEKHH2Q8IVE3 1493 aa26.74■■□□□ 1.87
NXF1-216ENST00000533499 COL17A1Q9UMD9 1497 aaPredicted RBP26.74■■□□□ 1.87
NXF1-216ENST00000533499 ARHGEF12Q9NZN5 1544 aa26.7■■□□□ 1.86
NXF1-216ENST00000533499 AFAP1Q8N556 730 aa26.69■■□□□ 1.86
NXF1-216ENST00000533499 TRAPPC8Q9Y2L5 1435 aa26.67■■□□□ 1.86
NXF1-216ENST00000533499 POGZQ7Z3K3 1410 aa26.66■■□□□ 1.86
NXF1-216ENST00000533499 KIAA1107Q9UPP5 1409 aa26.66■■□□□ 1.86
NXF1-216ENST00000533499 ITGAEP38570 1179 aa26.64■■□□□ 1.86
NXF1-216ENST00000533499 RICTORQ6R327 1708 aa26.64■■□□□ 1.85
NXF1-216ENST00000533499 TCOF1Q13428 1488 aaKnown RBP26.63■■□□□ 1.85
NXF1-216ENST00000533499 ZNF518AQ6AHZ1 1483 aa26.62■■□□□ 1.85
NXF1-216ENST00000533499 FRMPD1Q5SYB0 1578 aa26.61■■□□□ 1.85
NXF1-216ENST00000533499 MBD5Q9P267 1494 aa26.6■■□□□ 1.85
NXF1-216ENST00000533499 SPAG9O60271 1321 aaKnown RBP26.6■■□□□ 1.85
NXF1-216ENST00000533499 CCDC141Q6ZP82 1450 aa26.59■■□□□ 1.85
NXF1-216ENST00000533499 TSPY4P0CV99 314 aa26.58■■□□□ 1.85
NXF1-216ENST00000533499 TSPY10P0CW01 314 aa26.58■■□□□ 1.85
NXF1-216ENST00000533499 RSPH4AQ5TD94 716 aa26.58■■□□□ 1.85
NXF1-216ENST00000533499 RRBP1Q9P2E9 1410 aaKnown RBP26.57■■□□□ 1.84
NXF1-216ENST00000533499 ARHGEF5Q12774 1597 aa26.57■■□□□ 1.84
NXF1-216ENST00000533499 CHIC2Q9UKJ5 165 aa26.54■■□□□ 1.84
NXF1-216ENST00000533499 DAPK1P53355 1430 aa26.53■■□□□ 1.84
NXF1-216ENST00000533499 ABCC5O15440 1437 aa26.52■■□□□ 1.84
NXF1-216ENST00000533499 DNMT1P26358 1616 aaKnown RBP26.52■■□□□ 1.84
NXF1-216ENST00000533499 KDM5CP41229 1560 aa26.52■■□□□ 1.84
NXF1-216ENST00000533499 HECW2Q9P2P5 1572 aa26.52■■□□□ 1.84
NXF1-216ENST00000533499 ZMYM4Q5VZL5 1548 aa26.5■■□□□ 1.83
NXF1-216ENST00000533499 ZFYVE16Q7Z3T8 1539 aa26.49■■□□□ 1.83
NXF1-216ENST00000533499 C9orf84Q5VXU9 1444 aa26.48■■□□□ 1.83
NXF1-216ENST00000533499 YEATS2Q9ULM3 1422 aa26.48■■□□□ 1.83
NXF1-216ENST00000533499 ATP7AQ04656 1500 aa26.48■■□□□ 1.83
NXF1-216ENST00000533499 CROCC2H7BZ55 1655 aa26.47■■□□□ 1.83
NXF1-216ENST00000533499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.46■■□□□ 1.83
NXF1-216ENST00000533499 MAGI2Q86UL8 1455 aa26.46■■□□□ 1.83
NXF1-216ENST00000533499 MLH3Q9UHC1 1453 aa26.46■■□□□ 1.83
NXF1-216ENST00000533499 KIDINS220Q9ULH0 1771 aa26.45■■□□□ 1.82
NXF1-216ENST00000533499 INO80Q9ULG1 1556 aaPredicted RBP26.44■■□□□ 1.82
NXF1-216ENST00000533499 ARHGEF40Q8TER5 1519 aa26.41■■□□□ 1.82
NXF1-216ENST00000533499 ABCA6Q8N139 1617 aa26.41■■□□□ 1.82
NXF1-216ENST00000533499 SHANK2Q9UPX8 1470 aa26.41■■□□□ 1.82
NXF1-216ENST00000533499 RTEL1-TNFRSF6BF6WH68 1400 aa26.4■■□□□ 1.82
NXF1-216ENST00000533499 RRP7BPQ9NSQ0 103 aa26.4■■□□□ 1.82
NXF1-216ENST00000533499 ARID4BQ4LE39 1312 aaPredicted RBP26.39■■□□□ 1.82
NXF1-216ENST00000533499 PTPRKQ15262 1439 aa26.39■■□□□ 1.82
NXF1-216ENST00000533499 MAST1Q9Y2H9 1570 aa26.39■■□□□ 1.82
NXF1-216ENST00000533499 DIP2CQ9Y2E4 1556 aa26.38■■□□□ 1.81
NXF1-216ENST00000533499 ANKRD30AQ9BXX3 1397 aa26.38■■□□□ 1.81
NXF1-216ENST00000533499 ATP10AO60312 1499 aa26.37■■□□□ 1.81
NXF1-216ENST00000533499 ADGBQ8N7X0 1667 aa26.36■■□□□ 1.81
NXF1-216ENST00000533499 KIF15Q9NS87 1388 aa26.33■■□□□ 1.8
NXF1-216ENST00000533499 A2MP01023 1474 aa26.31■■□□□ 1.8
NXF1-216ENST00000533499 PLXNC1O60486 1568 aa26.3■■□□□ 1.8
NXF1-216ENST00000533499 MLECQ14165 292 aa26.3■■□□□ 1.8
NXF1-216ENST00000533499 NCOA1Q15788 1441 aa26.3■■□□□ 1.8
NXF1-216ENST00000533499 TRIM26Q12899 539 aaPredicted RBP26.28■■□□□ 1.8
NXF1-216ENST00000533499 ADGRL2O95490 1459 aa26.28■■□□□ 1.8
NXF1-216ENST00000533499 DHX29Q7Z478 1369 aaKnown RBP26.26■■□□□ 1.79
NXF1-216ENST00000533499 ROCK1Q13464 1354 aa26.25■■□□□ 1.79
NXF1-216ENST00000533499 DUOX2Q9NRD8 1548 aa26.24■■□□□ 1.79
NXF1-216ENST00000533499 KIF3BO15066 747 aa26.24■■□□□ 1.79
NXF1-216ENST00000533499 SIGLEC1Q9BZZ2 1709 aa26.22■■□□□ 1.79
NXF1-216ENST00000533499 REREQ9P2R6 1566 aa26.2■■□□□ 1.79
NXF1-216ENST00000533499 GGT6Q6P531 493 aa26.2■■□□□ 1.78
NXF1-216ENST00000533499 ANKRD50Q9ULJ7 1429 aa26.18■■□□□ 1.78
NXF1-216ENST00000533499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.16■■□□□ 1.78
NXF1-216ENST00000533499 ERBINQ96RT1 1412 aa26.15■■□□□ 1.78
NXF1-216ENST00000533499 AGLP35573 1532 aa26.15■■□□□ 1.78
NXF1-216ENST00000533499 NAIPQ13075 1403 aa26.14■■□□□ 1.77
NXF1-216ENST00000533499 ESF1Q9H501 851 aaKnown RBP26.13■■□□□ 1.77
NXF1-216ENST00000533499 HFM1A2PYH4 1435 aa26.12■■□□□ 1.77
NXF1-216ENST00000533499 GCC2Q8IWJ2 1684 aa26.12■■□□□ 1.77
NXF1-216ENST00000533499 EIF2AK4Q9P2K8 1649 aaKnown RBP26.1■■□□□ 1.77
NXF1-216ENST00000533499 BCORL1Q5H9F3 1711 aa26.09■■□□□ 1.77
NXF1-216ENST00000533499 PCGF6Q9BYE7 350 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms