RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ARHGAP5Q13017 1502 aa29.07■■■□□ 2.24
SMPD1-205ENST00000531303 PLCH2O75038 1416 aa29.07■■■□□ 2.24
SMPD1-205ENST00000531303 RRBP1Q9P2E9 1410 aaKnown RBP29.07■■■□□ 2.24
SMPD1-205ENST00000531303 PTPN23Q9H3S7 1636 aa29.06■■■□□ 2.24
SMPD1-205ENST00000531303 ZNF644Q9H582 1327 aaPredicted RBP29.05■■■□□ 2.24
SMPD1-205ENST00000531303 MIA2Q96PC5 1412 aa29.05■■■□□ 2.24
SMPD1-205ENST00000531303 TRHP20396 242 aaPredicted RBP29.04■■■□□ 2.24
SMPD1-205ENST00000531303 TSPOAP1O95153 1857 aa29.03■■■□□ 2.24
SMPD1-205ENST00000531303 MAP3K4Q9Y6R4 1608 aa29.03■■■□□ 2.24
SMPD1-205ENST00000531303 EFCAB2Q5VUJ9 269 aa29.01■■■□□ 2.23
SMPD1-205ENST00000531303 ITGAEP38570 1179 aa28.97■■■□□ 2.23
SMPD1-205ENST00000531303 CAMSAP2Q08AD1 1489 aa28.97■■■□□ 2.23
SMPD1-205ENST00000531303 FANCAO15360 1455 aa28.96■■■□□ 2.23
SMPD1-205ENST00000531303 ARAP3Q8WWN8 1544 aa28.96■■■□□ 2.23
SMPD1-205ENST00000531303 TCOF1Q13428 1488 aaKnown RBP28.95■■■□□ 2.23
SMPD1-205ENST00000531303 SAMD9LQ8IVG5 1584 aa28.95■■■□□ 2.22
SMPD1-205ENST00000531303 PCGF6Q9BYE7 350 aa28.95■■■□□ 2.22
SMPD1-205ENST00000531303 HNRNPMP52272 730 aaKnown RBP eCLIP28.91■■■□□ 2.22
SMPD1-205ENST00000531303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.88■■■□□ 2.21
SMPD1-205ENST00000531303 PPRC1Q5VV67 1664 aaKnown RBP28.88■■■□□ 2.21
SMPD1-205ENST00000531303 CFAP74Q9C0B2 1584 aa28.87■■■□□ 2.21
SMPD1-205ENST00000531303 AKNAQ7Z591 1439 aa28.86■■■□□ 2.21
SMPD1-205ENST00000531303 SYCP2Q9BX26 1530 aa28.86■■■□□ 2.21
SMPD1-205ENST00000531303 PLEKHH2Q8IVE3 1493 aa28.83■■■□□ 2.21
SMPD1-205ENST00000531303 ABCC1P33527 1531 aa28.83■■■□□ 2.21
SMPD1-205ENST00000531303 ADGRL1O94910 1474 aa28.83■■■□□ 2.21
SMPD1-205ENST00000531303 TEX14Q8IWB6 1497 aa28.83■■■□□ 2.21
SMPD1-205ENST00000531303 ARHGEF12Q9NZN5 1544 aa28.82■■■□□ 2.2
SMPD1-205ENST00000531303 NEO1Q92859 1461 aa28.81■■■□□ 2.2
SMPD1-205ENST00000531303 SCAPERQ9BY12 1400 aa28.8■■■□□ 2.2
SMPD1-205ENST00000531303 KIAA1107Q9UPP5 1409 aa28.79■■■□□ 2.2
SMPD1-205ENST00000531303 ABCC5O15440 1437 aa28.79■■■□□ 2.2
SMPD1-205ENST00000531303 DAPK1P53355 1430 aa28.79■■■□□ 2.2
SMPD1-205ENST00000531303 DNMT1P26358 1616 aaKnown RBP28.78■■■□□ 2.2
SMPD1-205ENST00000531303 MBD5Q9P267 1494 aa28.78■■■□□ 2.2
SMPD1-205ENST00000531303 CHIC2Q9UKJ5 165 aa28.78■■■□□ 2.2
SMPD1-205ENST00000531303 PTPRKQ15262 1439 aa28.76■■■□□ 2.19
SMPD1-205ENST00000531303 ARHGEF5Q12774 1597 aa28.75■■■□□ 2.19
SMPD1-205ENST00000531303 TRAPPC8Q9Y2L5 1435 aa28.75■■■□□ 2.19
SMPD1-205ENST00000531303 CCDC141Q6ZP82 1450 aa28.74■■■□□ 2.19
SMPD1-205ENST00000531303 AFAP1Q8N556 730 aa28.73■■■□□ 2.19
SMPD1-205ENST00000531303 RSPH4AQ5TD94 716 aa28.72■■■□□ 2.19
SMPD1-205ENST00000531303 TSPY4P0CV99 314 aa28.72■■■□□ 2.19
SMPD1-205ENST00000531303 TSPY10P0CW01 314 aa28.72■■■□□ 2.19
SMPD1-205ENST00000531303 CROCC2H7BZ55 1655 aa28.71■■■□□ 2.19
SMPD1-205ENST00000531303 RAPGEF3O95398 923 aa28.69■■■□□ 2.18
SMPD1-205ENST00000531303 DENND4BO75064 1496 aaPredicted RBP28.68■■■□□ 2.18
SMPD1-205ENST00000531303 MYT1LQ9UL68 1186 aa28.66■■■□□ 2.18
SMPD1-205ENST00000531303 C9orf84Q5VXU9 1444 aa28.66■■■□□ 2.18
SMPD1-205ENST00000531303 POGZQ7Z3K3 1410 aa28.65■■■□□ 2.18
SMPD1-205ENST00000531303 RRP7BPQ9NSQ0 103 aa28.65■■■□□ 2.18
SMPD1-205ENST00000531303 SPAG9O60271 1321 aaKnown RBP28.63■■■□□ 2.17
SMPD1-205ENST00000531303 ZNF518AQ6AHZ1 1483 aa28.63■■■□□ 2.17
SMPD1-205ENST00000531303 SHANK2Q9UPX8 1470 aa28.62■■■□□ 2.17
SMPD1-205ENST00000531303 RICTORQ6R327 1708 aa28.6■■■□□ 2.17
SMPD1-205ENST00000531303 ADGBQ8N7X0 1667 aa28.6■■■□□ 2.17
SMPD1-205ENST00000531303 COL17A1Q9UMD9 1497 aaPredicted RBP28.59■■■□□ 2.17
SMPD1-205ENST00000531303 ANKRD30AQ9BXX3 1397 aa28.57■■■□□ 2.16
SMPD1-205ENST00000531303 MAST1Q9Y2H9 1570 aa28.56■■■□□ 2.16
SMPD1-205ENST00000531303 FRMPD1Q5SYB0 1578 aa28.56■■■□□ 2.16
SMPD1-205ENST00000531303 KDM5CP41229 1560 aa28.54■■■□□ 2.16
SMPD1-205ENST00000531303 ROCK1Q13464 1354 aa28.54■■■□□ 2.16
SMPD1-205ENST00000531303 NCOA1Q15788 1441 aa28.54■■■□□ 2.16
SMPD1-205ENST00000531303 ADGRL2O95490 1459 aa28.53■■■□□ 2.16
SMPD1-205ENST00000531303 ATP7AQ04656 1500 aa28.53■■■□□ 2.16
SMPD1-205ENST00000531303 ZFYVE16Q7Z3T8 1539 aa28.53■■■□□ 2.16
SMPD1-205ENST00000531303 INO80Q9ULG1 1556 aaPredicted RBP28.52■■■□□ 2.16
SMPD1-205ENST00000531303 HECW2Q9P2P5 1572 aa28.5■■■□□ 2.15
SMPD1-205ENST00000531303 RTEL1-TNFRSF6BF6WH68 1400 aa28.5■■■□□ 2.15
SMPD1-205ENST00000531303 KIDINS220Q9ULH0 1771 aa28.5■■■□□ 2.15
SMPD1-205ENST00000531303 KDM6BO15054 1643 aa28.5■■■□□ 2.15
SMPD1-205ENST00000531303 KIF15Q9NS87 1388 aa28.49■■■□□ 2.15
SMPD1-205ENST00000531303 HFM1A2PYH4 1435 aa28.48■■■□□ 2.15
SMPD1-205ENST00000531303 NAIPQ13075 1403 aa28.48■■■□□ 2.15
SMPD1-205ENST00000531303 SETD5Q9C0A6 1442 aa28.48■■■□□ 2.15
SMPD1-205ENST00000531303 MLH3Q9UHC1 1453 aa28.48■■■□□ 2.15
SMPD1-205ENST00000531303 PLXNC1O60486 1568 aa28.46■■■□□ 2.15
SMPD1-205ENST00000531303 GCC2Q8IWJ2 1684 aa28.46■■■□□ 2.15
SMPD1-205ENST00000531303 ZMYM4Q5VZL5 1548 aa28.44■■■□□ 2.14
SMPD1-205ENST00000531303 RAB3GAP2Q9H2M9 1393 aa28.42■■■□□ 2.14
SMPD1-205ENST00000531303 YEATS2Q9ULM3 1422 aa28.42■■■□□ 2.14
SMPD1-205ENST00000531303 ABCA6Q8N139 1617 aa28.4■■■□□ 2.14
SMPD1-205ENST00000531303 ANKRD50Q9ULJ7 1429 aa28.38■■■□□ 2.13
SMPD1-205ENST00000531303 DUOX2Q9NRD8 1548 aa28.37■■■□□ 2.13
SMPD1-205ENST00000531303 MAGI2Q86UL8 1455 aa28.36■■■□□ 2.13
SMPD1-205ENST00000531303 DIP2CQ9Y2E4 1556 aa28.36■■■□□ 2.13
SMPD1-205ENST00000531303 A2MP01023 1474 aa28.33■■■□□ 2.13
SMPD1-205ENST00000531303 DHX29Q7Z478 1369 aaKnown RBP28.32■■■□□ 2.12
SMPD1-205ENST00000531303 TRIM52Q96A61 297 aa28.29■■■□□ 2.12
SMPD1-205ENST00000531303 ATP10AO60312 1499 aa28.29■■■□□ 2.12
SMPD1-205ENST00000531303 ARHGEF40Q8TER5 1519 aa28.29■■■□□ 2.12
SMPD1-205ENST00000531303 ERBINQ96RT1 1412 aa28.28■■■□□ 2.12
SMPD1-205ENST00000531303 KIF3BO15066 747 aa28.26■■■□□ 2.11
SMPD1-205ENST00000531303 HRCP23327 699 aa28.25■■■□□ 2.11
SMPD1-205ENST00000531303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.24■■■□□ 2.11
SMPD1-205ENST00000531303 EIF2AK4Q9P2K8 1649 aaKnown RBP28.19■■■□□ 2.1
SMPD1-205ENST00000531303 SIGLEC1Q9BZZ2 1709 aa28.16■■■□□ 2.1
SMPD1-205ENST00000531303 NUP155O75694 1391 aa28.16■■■□□ 2.1
SMPD1-205ENST00000531303 GGT6Q6P531 493 aa28.15■■■□□ 2.1
SMPD1-205ENST00000531303 REREQ9P2R6 1566 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms