RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 ITGAEP38570 1179 aa21.14■□□□□ 0.98
NXF1-207ENST00000530875 MYO5CQ9NQX4 1742 aa21.14■□□□□ 0.97
NXF1-207ENST00000530875 PLCH2O75038 1416 aa21.13■□□□□ 0.97
NXF1-207ENST00000530875 CDC42BPBQ9Y5S2 1711 aa21.12■□□□□ 0.97
NXF1-207ENST00000530875 ARHGAP5Q13017 1502 aa21.12■□□□□ 0.97
NXF1-207ENST00000530875 CAMSAP2Q08AD1 1489 aa21.11■□□□□ 0.97
NXF1-207ENST00000530875 HRCP23327 699 aa21.1■□□□□ 0.97
NXF1-207ENST00000530875 CD109Q6YHK3 1445 aa21.07■□□□□ 0.96
NXF1-207ENST00000530875 DIP2BQ9P265 1576 aa21.07■□□□□ 0.96
NXF1-207ENST00000530875 FAM69CQ0P6D2 419 aa21.06■□□□□ 0.96
NXF1-207ENST00000530875 SAMD9LQ8IVG5 1584 aa21.06■□□□□ 0.96
NXF1-207ENST00000530875 ARAP3Q8WWN8 1544 aa21.06■□□□□ 0.96
NXF1-207ENST00000530875 GLI2P10070 1586 aa21.06■□□□□ 0.96
NXF1-207ENST00000530875 EFCAB2Q5VUJ9 269 aa21.06■□□□□ 0.96
NXF1-207ENST00000530875 PTPRKQ15262 1439 aa21.02■□□□□ 0.96
NXF1-207ENST00000530875 FANCAO15360 1455 aa21.02■□□□□ 0.96
NXF1-207ENST00000530875 MAP3K4Q9Y6R4 1608 aa21.01■□□□□ 0.95
NXF1-207ENST00000530875 HNRNPMP52272 730 aaKnown RBP eCLIP21■□□□□ 0.952e-7■□□□□ 9.4
NXF1-207ENST00000530875 ABCC5O15440 1437 aa21■□□□□ 0.95
NXF1-207ENST00000530875 DAPK1P53355 1430 aa21■□□□□ 0.95
NXF1-207ENST00000530875 DNMT1P26358 1616 aaKnown RBP21■□□□□ 0.95
NXF1-207ENST00000530875 SYCP2Q9BX26 1530 aa20.98■□□□□ 0.95
NXF1-207ENST00000530875 PLEKHH2Q8IVE3 1493 aa20.98■□□□□ 0.95
NXF1-207ENST00000530875 MBD5Q9P267 1494 aa20.98■□□□□ 0.95
NXF1-207ENST00000530875 KIAA1107Q9UPP5 1409 aa20.97■□□□□ 0.95
NXF1-207ENST00000530875 CHIC2Q9UKJ5 165 aa20.96■□□□□ 0.95
NXF1-207ENST00000530875 ABCC1P33527 1531 aa20.96■□□□□ 0.95
NXF1-207ENST00000530875 ARHGEF12Q9NZN5 1544 aa20.96■□□□□ 0.95
NXF1-207ENST00000530875 ARHGEF5Q12774 1597 aa20.95■□□□□ 0.94
NXF1-207ENST00000530875 KIF13AQ9H1H9 1805 aa20.95■□□□□ 0.94
NXF1-207ENST00000530875 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
NXF1-207ENST00000530875 ADGRL1O94910 1474 aa20.93■□□□□ 0.94
NXF1-207ENST00000530875 CFAP74Q9C0B2 1584 aa20.92■□□□□ 0.94
NXF1-207ENST00000530875 CCDC141Q6ZP82 1450 aa20.92■□□□□ 0.94
NXF1-207ENST00000530875 RSPH4AQ5TD94 716 aa20.92■□□□□ 0.94
NXF1-207ENST00000530875 CROCC2H7BZ55 1655 aa20.91■□□□□ 0.94
NXF1-207ENST00000530875 SCAPERQ9BY12 1400 aa20.9■□□□□ 0.94
NXF1-207ENST00000530875 NEO1Q92859 1461 aa20.9■□□□□ 0.94
NXF1-207ENST00000530875 TRAPPC8Q9Y2L5 1435 aa20.9■□□□□ 0.94
NXF1-207ENST00000530875 TSPY4P0CV99 314 aa20.89■□□□□ 0.93
NXF1-207ENST00000530875 TSPY10P0CW01 314 aa20.89■□□□□ 0.93
NXF1-207ENST00000530875 SHANK2Q9UPX8 1470 aa20.88■□□□□ 0.93
NXF1-207ENST00000530875 TSPOAP1O95153 1857 aa20.88■□□□□ 0.93
NXF1-207ENST00000530875 C9orf84Q5VXU9 1444 aa20.88■□□□□ 0.93
NXF1-207ENST00000530875 RRP7BPQ9NSQ0 103 aa20.88■□□□□ 0.93
NXF1-207ENST00000530875 PPRC1Q5VV67 1664 aaKnown RBP20.87■□□□□ 0.93
NXF1-207ENST00000530875 HFM1A2PYH4 1435 aa20.86■□□□□ 0.93
NXF1-207ENST00000530875 ROCK1Q13464 1354 aa20.86■□□□□ 0.93
NXF1-207ENST00000530875 AFAP1Q8N556 730 aa20.86■□□□□ 0.93
NXF1-207ENST00000530875 SETD5Q9C0A6 1442 aa20.85■□□□□ 0.93
NXF1-207ENST00000530875 TRHP20396 242 aaPredicted RBP20.85■□□□□ 0.93
NXF1-207ENST00000530875 TEX14Q8IWB6 1497 aa20.85■□□□□ 0.93
NXF1-207ENST00000530875 NAIPQ13075 1403 aa20.84■□□□□ 0.93
NXF1-207ENST00000530875 ADGRL2O95490 1459 aa20.83■□□□□ 0.93
NXF1-207ENST00000530875 ADGBQ8N7X0 1667 aa20.83■□□□□ 0.92
NXF1-207ENST00000530875 NCOA1Q15788 1441 aa20.82■□□□□ 0.92
NXF1-207ENST00000530875 ANKRD30AQ9BXX3 1397 aa20.82■□□□□ 0.92
NXF1-207ENST00000530875 RAB3GAP2Q9H2M9 1393 aa20.82■□□□□ 0.92
NXF1-207ENST00000530875 MAST1Q9Y2H9 1570 aa20.81■□□□□ 0.92
NXF1-207ENST00000530875 POGZQ7Z3K3 1410 aa20.8■□□□□ 0.92
NXF1-207ENST00000530875 SPAG9O60271 1321 aaKnown RBP20.8■□□□□ 0.92
NXF1-207ENST00000530875 ZNF518AQ6AHZ1 1483 aa20.79■□□□□ 0.92
NXF1-207ENST00000530875 DENND4BO75064 1496 aaPredicted RBP20.79■□□□□ 0.92
NXF1-207ENST00000530875 GCC2Q8IWJ2 1684 aa20.79■□□□□ 0.92
NXF1-207ENST00000530875 RAPGEF3O95398 923 aa20.77■□□□□ 0.92
NXF1-207ENST00000530875 KIF15Q9NS87 1388 aa20.76■□□□□ 0.91
NXF1-207ENST00000530875 ZFYVE16Q7Z3T8 1539 aa20.75■□□□□ 0.91
NXF1-207ENST00000530875 RTEL1-TNFRSF6BF6WH68 1400 aa20.75■□□□□ 0.91
NXF1-207ENST00000530875 KDM5CP41229 1560 aa20.74■□□□□ 0.91
NXF1-207ENST00000530875 MYT1LQ9UL68 1186 aa20.74■□□□□ 0.91
NXF1-207ENST00000530875 KDM6BO15054 1643 aa20.74■□□□□ 0.91
NXF1-207ENST00000530875 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
NXF1-207ENST00000530875 PLXNC1O60486 1568 aa20.73■□□□□ 0.91
NXF1-207ENST00000530875 INO80Q9ULG1 1556 aaPredicted RBP20.73■□□□□ 0.91
NXF1-207ENST00000530875 RICTORQ6R327 1708 aa20.71■□□□□ 0.91
NXF1-207ENST00000530875 ANKRD50Q9ULJ7 1429 aa20.7■□□□□ 0.9
NXF1-207ENST00000530875 FRMPD1Q5SYB0 1578 aa20.7■□□□□ 0.9
NXF1-207ENST00000530875 MLH3Q9UHC1 1453 aa20.69■□□□□ 0.9
NXF1-207ENST00000530875 COL17A1Q9UMD9 1497 aaPredicted RBP20.69■□□□□ 0.9
NXF1-207ENST00000530875 HECW2Q9P2P5 1572 aa20.68■□□□□ 0.9
NXF1-207ENST00000530875 KIDINS220Q9ULH0 1771 aa20.68■□□□□ 0.9
NXF1-207ENST00000530875 CCER1Q8TC90 406 aaPredicted RBP20.66■□□□□ 0.9
NXF1-207ENST00000530875 DUOX2Q9NRD8 1548 aa20.66■□□□□ 0.9
NXF1-207ENST00000530875 DHX57Q6P158 1386 aaKnown RBP20.63■□□□□ 0.89
NXF1-207ENST00000530875 ZMYM4Q5VZL5 1548 aa20.63■□□□□ 0.89
NXF1-207ENST00000530875 TRIM52Q96A61 297 aa20.63■□□□□ 0.89
NXF1-207ENST00000530875 ERBINQ96RT1 1412 aa20.62■□□□□ 0.89
NXF1-207ENST00000530875 ABCA6Q8N139 1617 aa20.61■□□□□ 0.89
NXF1-207ENST00000530875 YEATS2Q9ULM3 1422 aa20.6■□□□□ 0.89
NXF1-207ENST00000530875 DHX29Q7Z478 1369 aaKnown RBP20.59■□□□□ 0.89
NXF1-207ENST00000530875 DIP2CQ9Y2E4 1556 aa20.58■□□□□ 0.88
NXF1-207ENST00000530875 A2MP01023 1474 aa20.58■□□□□ 0.88
NXF1-207ENST00000530875 MAGI2Q86UL8 1455 aa20.58■□□□□ 0.88
NXF1-207ENST00000530875 ACIN1Q9UKV3 1341 aaKnown RBP20.57■□□□□ 0.88
NXF1-207ENST00000530875 NUP155O75694 1391 aa20.53■□□□□ 0.88
NXF1-207ENST00000530875 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
NXF1-207ENST00000530875 KIF3BO15066 747 aa20.52■□□□□ 0.88
NXF1-207ENST00000530875 MPHOSPH9Q99550 1183 aa20.52■□□□□ 0.88
NXF1-207ENST00000530875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.51■□□□□ 0.871e-7■■■□□ 16.1
NXF1-207ENST00000530875 UNC13BO14795 1591 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms