RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
NXF1-207ENST00000530875 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
NXF1-207ENST00000530875 ABCC9O60706 1549 aa27.24■■□□□ 1.95
NXF1-207ENST00000530875 ZCCHC6Q5VYS8 1495 aaKnown RBP27.14■■□□□ 1.94
NXF1-207ENST00000530875 DCAF8L2P0C7V8 631 aa26.91■■□□□ 1.9
NXF1-207ENST00000530875 DCAF1Q9Y4B6 1507 aa26.78■■□□□ 1.88
NXF1-207ENST00000530875 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
NXF1-207ENST00000530875 NACADO15069 1562 aa26.57■■□□□ 1.84
NXF1-207ENST00000530875 RB1CC1Q8TDY2 1594 aa26.43■■□□□ 1.82
NXF1-207ENST00000530875 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
NXF1-207ENST00000530875 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
NXF1-207ENST00000530875 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
NXF1-207ENST00000530875 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
NXF1-207ENST00000530875 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.699e-7■□□□□ 8.3
NXF1-207ENST00000530875 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
NXF1-207ENST00000530875 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
NXF1-207ENST00000530875 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
NXF1-207ENST00000530875 SUPT5HO00267 1087 aaKnown RBP25.01■■□□□ 1.59
NXF1-207ENST00000530875 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
NXF1-207ENST00000530875 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
NXF1-207ENST00000530875 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
NXF1-207ENST00000530875 WIZO95785 1651 aa24.8■■□□□ 1.56
NXF1-207ENST00000530875 PEG3Q9GZU2 1588 aa24.69■■□□□ 1.54
NXF1-207ENST00000530875 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
NXF1-207ENST00000530875 SMARCA2P51531 1590 aa24.65■■□□□ 1.54
NXF1-207ENST00000530875 CC2D2AQ9P2K1 1620 aa24.63■■□□□ 1.53
NXF1-207ENST00000530875 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
NXF1-207ENST00000530875 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
NXF1-207ENST00000530875 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
NXF1-207ENST00000530875 HMGXB3Q12766 1538 aa24.45■■□□□ 1.51
NXF1-207ENST00000530875 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
NXF1-207ENST00000530875 CCDC88BA6NC98 1476 aa24.28■■□□□ 1.48
NXF1-207ENST00000530875 CFTRP13569 1480 aa23.88■■□□□ 1.41
NXF1-207ENST00000530875 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
NXF1-207ENST00000530875 NESP48681 1621 aa23.8■■□□□ 1.4
NXF1-207ENST00000530875 LAMC3Q9Y6N6 1575 aa23.75■■□□□ 1.39
NXF1-207ENST00000530875 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
NXF1-207ENST00000530875 PRDM2Q13029 1718 aa23.69■■□□□ 1.38
NXF1-207ENST00000530875 ABCC8Q09428 1581 aa23.65■■□□□ 1.38
NXF1-207ENST00000530875 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
NXF1-207ENST00000530875 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
NXF1-207ENST00000530875 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
NXF1-207ENST00000530875 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
NXF1-207ENST00000530875 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
NXF1-207ENST00000530875 KIF21AQ7Z4S6 1674 aa23.49■■□□□ 1.35
NXF1-207ENST00000530875 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
NXF1-207ENST00000530875 CUX1P39880 1505 aa23.42■■□□□ 1.34
NXF1-207ENST00000530875 ERCC6Q03468 1493 aa23.41■■□□□ 1.34
NXF1-207ENST00000530875 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
NXF1-207ENST00000530875 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
NXF1-207ENST00000530875 URB2Q14146 1524 aaKnown RBP23.35■■□□□ 1.33
NXF1-207ENST00000530875 DNMBPQ6XZF7 1577 aa23.33■■□□□ 1.33
NXF1-207ENST00000530875 MRC2Q9UBG0 1479 aa23.31■■□□□ 1.32
NXF1-207ENST00000530875 TOPBP1Q92547 1522 aa23.31■■□□□ 1.32
NXF1-207ENST00000530875 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
NXF1-207ENST00000530875 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
NXF1-207ENST00000530875 WDR62O43379 1518 aa23.2■■□□□ 1.3
NXF1-207ENST00000530875 POLA1P09884 1462 aaPredicted RBP23.18■■□□□ 1.3
NXF1-207ENST00000530875 SOGA1O94964 1423 aa23.13■■□□□ 1.29
NXF1-207ENST00000530875 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
NXF1-207ENST00000530875 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
NXF1-207ENST00000530875 RUSC2Q8N2Y8 1516 aa23.07■■□□□ 1.28
NXF1-207ENST00000530875 CUX2O14529 1486 aa23.04■■□□□ 1.28
NXF1-207ENST00000530875 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
NXF1-207ENST00000530875 TARBP1Q13395 1621 aaKnown RBP22.99■■□□□ 1.27
NXF1-207ENST00000530875 EEA1Q15075 1411 aa22.98■■□□□ 1.27
NXF1-207ENST00000530875 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
NXF1-207ENST00000530875 IFT140Q96RY7 1462 aa22.97■■□□□ 1.27
NXF1-207ENST00000530875 WDR97A6NE52 1622 aa22.95■■□□□ 1.27
NXF1-207ENST00000530875 TDRD9Q8NDG6 1382 aaKnown RBP22.92■■□□□ 1.26
NXF1-207ENST00000530875 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
NXF1-207ENST00000530875 ZNF608Q9ULD9 1512 aaPredicted RBP22.86■■□□□ 1.25
NXF1-207ENST00000530875 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
NXF1-207ENST00000530875 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.252e-7■■■□□ 19.2
NXF1-207ENST00000530875 GAPVD1Q14C86 1478 aa22.83■■□□□ 1.25
NXF1-207ENST00000530875 IGF1RP08069 1367 aa22.82■■□□□ 1.24
NXF1-207ENST00000530875 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
NXF1-207ENST00000530875 EHMT2Q96KQ7 1210 aa22.8■■□□□ 1.24
NXF1-207ENST00000530875 EIF4G3O43432 1585 aaKnown RBP22.77■■□□□ 1.24
NXF1-207ENST00000530875 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
NXF1-207ENST00000530875 PRXQ9BXM0 1461 aa22.72■■□□□ 1.23
NXF1-207ENST00000530875 GRIN2BQ13224 1484 aa22.72■■□□□ 1.23
NXF1-207ENST00000530875 PBRM1Q86U86 1689 aa22.71■■□□□ 1.23
NXF1-207ENST00000530875 KIF21BO75037 1637 aa22.7■■□□□ 1.23
NXF1-207ENST00000530875 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
NXF1-207ENST00000530875 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
NXF1-207ENST00000530875 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
NXF1-207ENST00000530875 CUL7Q14999 1698 aa22.66■■□□□ 1.22
NXF1-207ENST00000530875 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
NXF1-207ENST00000530875 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
NXF1-207ENST00000530875 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
NXF1-207ENST00000530875 FHAD1B1AJZ9 1412 aa22.58■■□□□ 1.21
NXF1-207ENST00000530875 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
NXF1-207ENST00000530875 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.19
NXF1-207ENST00000530875 SYNJ2O15056 1496 aa22.48■■□□□ 1.19
NXF1-207ENST00000530875 CHMP7Q8WUX9 453 aaPredicted RBP22.46■■□□□ 1.19
NXF1-207ENST00000530875 FBLN2P98095 1184 aa22.45■■□□□ 1.18
NXF1-207ENST00000530875 GRIN2AQ12879 1464 aa22.44■■□□□ 1.18
NXF1-207ENST00000530875 CEP162Q5TB80 1403 aa22.38■■□□□ 1.17
NXF1-207ENST00000530875 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms