RNA–Protein interactions for RNA: ENST00000530642.1

FOXRED1-210, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 3,045 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-210ENST00000530642 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
FOXRED1-210ENST00000530642 EPRSP07814 1512 aaKnown RBP12.3□□□□□ -0.44
FOXRED1-210ENST00000530642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.3□□□□□ -0.44
FOXRED1-210ENST00000530642 EHBP1L1Q8N3D4 1523 aa12.29□□□□□ -0.44
FOXRED1-210ENST00000530642 CCDC136Q96JN2 1154 aa12.29□□□□□ -0.44
FOXRED1-210ENST00000530642 RBM19Q9Y4C8 960 aaKnown RBP12.29□□□□□ -0.44
FOXRED1-210ENST00000530642 FOXD1Q16676 465 aa12.29□□□□□ -0.44
FOXRED1-210ENST00000530642 CLSPNQ9HAW4 1339 aa12.29□□□□□ -0.44
FOXRED1-210ENST00000530642 MAGI3Q5TCQ9 1506 aa12.28□□□□□ -0.44
FOXRED1-210ENST00000530642 NPM2Q86SE8 214 aaKnown RBP12.28□□□□□ -0.44
FOXRED1-210ENST00000530642 JPH4Q96JJ6 628 aa12.28□□□□□ -0.44
FOXRED1-210ENST00000530642 NCOA2Q15596 1464 aa12.28□□□□□ -0.44
FOXRED1-210ENST00000530642 SUPT6HQ7KZ85 1726 aaKnown RBP12.27□□□□□ -0.44
FOXRED1-210ENST00000530642 FGD6Q6ZV73 1430 aa12.27□□□□□ -0.44
FOXRED1-210ENST00000530642 DHX57Q6P158 1386 aaKnown RBP12.26□□□□□ -0.45
FOXRED1-210ENST00000530642 ARHGEF11O15085 1522 aa12.26□□□□□ -0.45
FOXRED1-210ENST00000530642 CDK13Q14004 1512 aaKnown RBP12.26□□□□□ -0.45
FOXRED1-210ENST00000530642 CARMIL2Q6F5E8 1435 aa12.25□□□□□ -0.45
FOXRED1-210ENST00000530642 RAPGEF6Q8TEU7 1601 aa12.25□□□□□ -0.45
FOXRED1-210ENST00000530642 MYOM3Q5VTT5 1437 aa12.25□□□□□ -0.45
FOXRED1-210ENST00000530642 NUP153P49790 1475 aaKnown RBP12.24□□□□□ -0.45
FOXRED1-210ENST00000530642 PAXIP1Q6ZW49 1069 aaPredicted RBP12.23□□□□□ -0.45
FOXRED1-210ENST00000530642 CFAP44Q96MT7 982 aa12.23□□□□□ -0.45
FOXRED1-210ENST00000530642 RAB3GAP2Q9H2M9 1393 aa12.23□□□□□ -0.45
FOXRED1-210ENST00000530642 CHIC2Q9UKJ5 165 aa12.22□□□□□ -0.45
FOXRED1-210ENST00000530642 SETD5Q9C0A6 1442 aa12.22□□□□□ -0.45
FOXRED1-210ENST00000530642 CHD1O14646 1710 aa12.21□□□□□ -0.45
FOXRED1-210ENST00000530642 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
FOXRED1-210ENST00000530642 UBE2Q2Q8WVN8 375 aa12.2□□□□□ -0.46
FOXRED1-210ENST00000530642 PLB1Q6P1J6 1458 aa12.2□□□□□ -0.46
FOXRED1-210ENST00000530642 DEKP35659 375 aaKnown RBP12.19□□□□□ -0.46
FOXRED1-210ENST00000530642 PTPN23Q9H3S7 1636 aa12.18□□□□□ -0.46
FOXRED1-210ENST00000530642 CDK11AQ9UQ88 783 aaPredicted RBP12.17□□□□□ -0.46
FOXRED1-210ENST00000530642 KCNH8Q96L42 1107 aa12.17□□□□□ -0.46
FOXRED1-210ENST00000530642 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
FOXRED1-210ENST00000530642 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
FOXRED1-210ENST00000530642 PRG4Q92954 1404 aaPredicted RBP12.16□□□□□ -0.46
FOXRED1-210ENST00000530642 MIA2Q96PC5 1412 aa12.16□□□□□ -0.46
FOXRED1-210ENST00000530642 PKD2Q13563 968 aa12.16□□□□□ -0.46
FOXRED1-210ENST00000530642 ABCA8O94911 1581 aa12.15□□□□□ -0.46
FOXRED1-210ENST00000530642 ZNF777Q9ULD5 760 aaPredicted RBP12.13□□□□□ -0.47
FOXRED1-210ENST00000530642 SHROOM2Q13796 1616 aa12.13□□□□□ -0.47
FOXRED1-210ENST00000530642 TROQ12816 1431 aaPredicted RBP12.13□□□□□ -0.47
FOXRED1-210ENST00000530642 HFM1A2PYH4 1435 aa12.13□□□□□ -0.47
FOXRED1-210ENST00000530642 RRP7BPQ9NSQ0 103 aa12.12□□□□□ -0.47
FOXRED1-210ENST00000530642 SIN3AQ96ST3 1273 aa12.12□□□□□ -0.47
FOXRED1-210ENST00000530642 MAPKBP1O60336 1514 aa12.12□□□□□ -0.47
FOXRED1-210ENST00000530642 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
FOXRED1-210ENST00000530642 PTPRGP23470 1445 aa12.11□□□□□ -0.47
FOXRED1-210ENST00000530642 ATP10BO94823 1461 aa12.1□□□□□ -0.47
FOXRED1-210ENST00000530642 HIRIP3Q9BW71 556 aaPredicted RBP12.1□□□□□ -0.47
FOXRED1-210ENST00000530642 NAIPQ13075 1403 aa12.09□□□□□ -0.47
FOXRED1-210ENST00000530642 ADCY10Q96PN6 1610 aa12.09□□□□□ -0.47
FOXRED1-210ENST00000530642 ZNF644Q9H582 1327 aaPredicted RBP12.08□□□□□ -0.48
FOXRED1-210ENST00000530642 CLASP1Q7Z460 1538 aa12.07□□□□□ -0.48
FOXRED1-210ENST00000530642 KIF14Q15058 1648 aa12.07□□□□□ -0.48
FOXRED1-210ENST00000530642 PLEKHD1A6NEE1 506 aa12.07□□□□□ -0.48
FOXRED1-210ENST00000530642 AKNAQ7Z591 1439 aa12.06□□□□□ -0.48
FOXRED1-210ENST00000530642 GPATCH8Q9UKJ3 1502 aaKnown RBP12.06□□□□□ -0.48
FOXRED1-210ENST00000530642 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
FOXRED1-210ENST00000530642 UACAQ9BZF9 1416 aa12.05□□□□□ -0.48
FOXRED1-210ENST00000530642 ITSN2Q9NZM3 1697 aa12.05□□□□□ -0.48
FOXRED1-210ENST00000530642 TRHP20396 242 aaPredicted RBP12.05□□□□□ -0.48
FOXRED1-210ENST00000530642 GCC2Q8IWJ2 1684 aa12.03□□□□□ -0.48
FOXRED1-210ENST00000530642 DNMT1P26358 1616 aaKnown RBP12.03□□□□□ -0.48
FOXRED1-210ENST00000530642 DAPK1P53355 1430 aa12.03□□□□□ -0.48
FOXRED1-210ENST00000530642 TRIM52Q96A61 297 aa12.03□□□□□ -0.48
FOXRED1-210ENST00000530642 CFDP1Q9UEE9 299 aaPredicted RBP12.03□□□□□ -0.48
FOXRED1-210ENST00000530642 ABCC5O15440 1437 aa12.03□□□□□ -0.48
FOXRED1-210ENST00000530642 ABCC10Q5T3U5 1492 aa12.02□□□□□ -0.49
FOXRED1-210ENST00000530642 IL27Q8NEV9 243 aa12.01□□□□□ -0.49
FOXRED1-210ENST00000530642 CNKSR2Q8WXI2 1034 aa12.01□□□□□ -0.49
FOXRED1-210ENST00000530642 CAMSAP2Q08AD1 1489 aa12.01□□□□□ -0.49
FOXRED1-210ENST00000530642 ROCK1Q13464 1354 aa12.01□□□□□ -0.49
FOXRED1-210ENST00000530642 NBR1Q14596 966 aa12□□□□□ -0.49
FOXRED1-210ENST00000530642 ERICH6BQ5W0A0 696 aa12□□□□□ -0.49
FOXRED1-210ENST00000530642 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
FOXRED1-210ENST00000530642 FANCIQ9NVI1 1328 aa12□□□□□ -0.49
FOXRED1-210ENST00000530642 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
FOXRED1-210ENST00000530642 ABCC2Q92887 1545 aa12□□□□□ -0.49
FOXRED1-210ENST00000530642 MYT1LQ9UL68 1186 aa11.99□□□□□ -0.49
FOXRED1-210ENST00000530642 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
FOXRED1-210ENST00000530642 KDM6BO15054 1643 aa11.98□□□□□ -0.49
FOXRED1-210ENST00000530642 IRX6P78412 446 aaPredicted RBP11.96□□□□□ -0.49
FOXRED1-210ENST00000530642 UHRF1BP1LA0JNW5 1464 aa11.95□□□□□ -0.5
FOXRED1-210ENST00000530642 CROCC2H7BZ55 1655 aa11.94□□□□□ -0.5
FOXRED1-210ENST00000530642 PKNOX2Q96KN3 472 aa11.94□□□□□ -0.5
FOXRED1-210ENST00000530642 NCOA1Q15788 1441 aa11.94□□□□□ -0.5
FOXRED1-210ENST00000530642 DENND4BO75064 1496 aaPredicted RBP11.93□□□□□ -0.5
FOXRED1-210ENST00000530642 ADGRL2O95490 1459 aa11.93□□□□□ -0.5
FOXRED1-210ENST00000530642 ADGBQ8N7X0 1667 aa11.93□□□□□ -0.5
FOXRED1-210ENST00000530642 KDM5BQ9UGL1 1544 aa11.92□□□□□ -0.5
FOXRED1-210ENST00000530642 CDC42BPBQ9Y5S2 1711 aa11.92□□□□□ -0.5
FOXRED1-210ENST00000530642 PREX2Q70Z35 1606 aa11.92□□□□□ -0.5
FOXRED1-210ENST00000530642 ZCCHC11Q5TAX3 1644 aaKnown RBP11.91□□□□□ -0.5
FOXRED1-210ENST00000530642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.91□□□□□ -0.5
FOXRED1-210ENST00000530642 MPHOSPH9Q99550 1183 aa11.91□□□□□ -0.5
FOXRED1-210ENST00000530642 SHANK2Q9UPX8 1470 aa11.9□□□□□ -0.5
FOXRED1-210ENST00000530642 PPP1R15AO75807 674 aaPredicted RBP11.9□□□□□ -0.5
FOXRED1-210ENST00000530642 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms