RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 OS9Q13438 667 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-223ENST00000529986 CUX2O14529 1486 aa9.71□□□□□ -0.85
CTNND1-223ENST00000529986 SLC4A3P48751 1232 aa9.71□□□□□ -0.85
CTNND1-223ENST00000529986 GBP4Q96PP9 640 aa9.71□□□□□ -0.85
CTNND1-223ENST00000529986 SMARCA4P51532 1647 aa9.71□□□□□ -0.85
CTNND1-223ENST00000529986 TCERG1O14776 1098 aaKnown RBP9.71□□□□□ -0.86
CTNND1-223ENST00000529986 FOXD4L1Q9NU39 408 aa9.71□□□□□ -0.86
CTNND1-223ENST00000529986 VPS8Q8N3P4 1428 aa9.7□□□□□ -0.86
CTNND1-223ENST00000529986 CARMIL1Q5VZK9 1371 aa9.7□□□□□ -0.86
CTNND1-223ENST00000529986 RCAN3Q9UKA8 241 aa9.69□□□□□ -0.86
CTNND1-223ENST00000529986 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
CTNND1-223ENST00000529986 HSPA5P11021 654 aaKnown RBP9.69□□□□□ -0.86
CTNND1-223ENST00000529986 MFAP1P55081 439 aaKnown RBP9.68□□□□□ -0.86
CTNND1-223ENST00000529986 RSPH6AQ9H0K4 717 aa9.68□□□□□ -0.86
CTNND1-223ENST00000529986 KCNH8Q96L42 1107 aa9.68□□□□□ -0.86
CTNND1-223ENST00000529986 NUDCQ9Y266 331 aa9.68□□□□□ -0.86
CTNND1-223ENST00000529986 PLEKHD1A6NEE1 506 aa9.68□□□□□ -0.86
CTNND1-223ENST00000529986 CCNB3Q8WWL7 1395 aa9.68□□□□□ -0.86
CTNND1-223ENST00000529986 MS4A1P11836 297 aa9.67□□□□□ -0.86
CTNND1-223ENST00000529986 PPP1R15AO75807 674 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-223ENST00000529986 MCCP23508 829 aa9.65□□□□□ -0.86
CTNND1-223ENST00000529986 ERCC6Q03468 1493 aa9.65□□□□□ -0.86
CTNND1-223ENST00000529986 GSE1Q14687 1217 aa9.65□□□□□ -0.87
CTNND1-223ENST00000529986 EIF4G1Q04637 1599 aaKnown RBP9.65□□□□□ -0.87
CTNND1-223ENST00000529986 CHMP4BQ9H444 224 aaKnown RBP9.64□□□□□ -0.87
CTNND1-223ENST00000529986 FOXD4L5Q5VV16 416 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-223ENST00000529986 FOXD4L4Q8WXT5 416 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-223ENST00000529986 DCAF11Q8TEB1 546 aa9.63□□□□□ -0.87
CTNND1-223ENST00000529986 NOL8Q76FK4 1167 aaKnown RBP9.63□□□□□ -0.87
CTNND1-223ENST00000529986 CALD1Q05682 793 aaKnown RBP9.63□□□□□ -0.87
CTNND1-223ENST00000529986 CFDP1Q9UEE9 299 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-223ENST00000529986 ARHGAP35Q9NRY4 1499 aa9.62□□□□□ -0.87
CTNND1-223ENST00000529986 ITPRIPQ8IWB1 547 aa9.62□□□□□ -0.87
CTNND1-223ENST00000529986 PTMSP20962 102 aa9.62□□□□□ -0.87
CTNND1-223ENST00000529986 FOXD1Q16676 465 aa9.61□□□□□ -0.87
CTNND1-223ENST00000529986 ATAD2BQ9ULI0 1458 aa9.61□□□□□ -0.87
CTNND1-223ENST00000529986 TMF1P82094 1093 aa9.6□□□□□ -0.87
CTNND1-223ENST00000529986 RWDD1Q9H446 243 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-223ENST00000529986 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-223ENST00000529986 SOX12O15370 315 aa9.6□□□□□ -0.87
CTNND1-223ENST00000529986 SYAP1Q96A49 352 aaPredicted RBP9.6□□□□□ -0.87
CTNND1-223ENST00000529986 CLUAP1Q96AJ1 413 aa9.6□□□□□ -0.87
CTNND1-223ENST00000529986 PDS5BQ9NTI5 1447 aa9.59□□□□□ -0.87
CTNND1-223ENST00000529986 PDE4AP27815 886 aa9.59□□□□□ -0.87
CTNND1-223ENST00000529986 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
CTNND1-223ENST00000529986 SETD5Q9C0A6 1442 aa9.59□□□□□ -0.87
CTNND1-223ENST00000529986 USP35Q9P2H5 1018 aa9.59□□□□□ -0.87
CTNND1-223ENST00000529986 GNL2Q13823 731 aaKnown RBP9.59□□□□□ -0.87
CTNND1-223ENST00000529986 FAM13BQ9NYF5 915 aa9.59□□□□□ -0.87
CTNND1-223ENST00000529986 POGKQ9P215 609 aa9.59□□□□□ -0.87
CTNND1-223ENST00000529986 MORC1Q86VD1 984 aa9.58□□□□□ -0.88
CTNND1-223ENST00000529986 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-223ENST00000529986 KIAA1211Q6ZU35 1233 aa9.57□□□□□ -0.88
CTNND1-223ENST00000529986 A0A0U1RQG5 324 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-223ENST00000529986 FOXD4L6Q3SYB3 417 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-223ENST00000529986 FOXD4L3Q6VB84 417 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-223ENST00000529986 NOC3LQ8WTT2 800 aaKnown RBP9.57□□□□□ -0.88
CTNND1-223ENST00000529986 FMN1Q68DA7 1419 aa9.57□□□□□ -0.88
CTNND1-223ENST00000529986 ZNF771Q7L3S4 317 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-223ENST00000529986 KTN1Q86UP2 1357 aaKnown RBP9.57□□□□□ -0.88
CTNND1-223ENST00000529986 CLSTN1O94985 981 aa9.57□□□□□ -0.88
CTNND1-223ENST00000529986 LMOD2Q6P5Q4 547 aa9.57□□□□□ -0.88
CTNND1-223ENST00000529986 SAFB2Q14151 953 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTNND1-223ENST00000529986 PLIN1O60240 522 aa9.56□□□□□ -0.88
CTNND1-223ENST00000529986 RAPGEF2Q9Y4G8 1499 aa9.56□□□□□ -0.88
CTNND1-223ENST00000529986 GOLGA6L1Q8N7Z2 621 aa9.55□□□□□ -0.88
CTNND1-223ENST00000529986 HSP90B1P14625 803 aaKnown RBP9.55□□□□□ -0.88
CTNND1-223ENST00000529986 CCDC146Q8IYE0 955 aa9.55□□□□□ -0.88
CTNND1-223ENST00000529986 PDE4CQ08493 712 aa9.55□□□□□ -0.88
CTNND1-223ENST00000529986 DDX49Q9Y6V7 483 aaKnown RBP9.55□□□□□ -0.88
CTNND1-223ENST00000529986 FANCIQ9NVI1 1328 aa9.55□□□□□ -0.88
CTNND1-223ENST00000529986 PMFBP1Q8TBY8 1022 aa9.55□□□□□ -0.88
CTNND1-223ENST00000529986 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
CTNND1-223ENST00000529986 EXOC6Q8TAG9 804 aa9.54□□□□□ -0.88
CTNND1-223ENST00000529986 IPO8O15397 1037 aaKnown RBP9.54□□□□□ -0.88
CTNND1-223ENST00000529986 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
CTNND1-223ENST00000529986 DDX11L8A8MPP1 907 aa9.53□□□□□ -0.88
CTNND1-223ENST00000529986 TRIM6-TRIM34B2RNG4 842 aa9.53□□□□□ -0.88
CTNND1-223ENST00000529986 U2AF1L5P0DN76 240 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-223ENST00000529986 HAP1P54257 671 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-223ENST00000529986 U2AF1Q01081 240 aaKnown RBP eCLIP9.53□□□□□ -0.882e-10■■□□□ 12.3
CTNND1-223ENST00000529986 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
CTNND1-223ENST00000529986 CREBRFQ8IUR6 639 aa9.53□□□□□ -0.88
CTNND1-223ENST00000529986 KANK4Q5T7N3 995 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-223ENST00000529986 SMC4Q9NTJ3 1288 aa9.52□□□□□ -0.89
CTNND1-223ENST00000529986 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
CTNND1-223ENST00000529986 SRPK2P78362 688 aaKnown RBP9.51□□□□□ -0.89
CTNND1-223ENST00000529986 FAM161AQ3B820 660 aa9.51□□□□□ -0.89
CTNND1-223ENST00000529986 ZNF592Q92610 1267 aa9.51□□□□□ -0.89
CTNND1-223ENST00000529986 CCAR2Q8N163 923 aaKnown RBP9.51□□□□□ -0.89
CTNND1-223ENST00000529986 BCL11BQ9C0K0 894 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-223ENST00000529986 TPM4P67936 248 aa9.51□□□□□ -0.89
CTNND1-223ENST00000529986 CARMIL2Q6F5E8 1435 aa9.51□□□□□ -0.89
CTNND1-223ENST00000529986 ISY1Q9ULR0 285 aaKnown RBP9.51□□□□□ -0.89
CTNND1-223ENST00000529986 HTATSF1O43719 755 aaKnown RBP9.5□□□□□ -0.89
CTNND1-223ENST00000529986 RALBP1Q15311 655 aa9.5□□□□□ -0.89
CTNND1-223ENST00000529986 PKNOX2Q96KN3 472 aa9.5□□□□□ -0.89
CTNND1-223ENST00000529986 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
CTNND1-223ENST00000529986 NPHP1O15259 732 aa9.49□□□□□ -0.89
CTNND1-223ENST00000529986 CRBNQ96SW2 442 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms