RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 KIF21BO75037 1637 aa20.13■□□□□ 0.81
USP35-203ENST00000529308 RBM19Q9Y4C8 960 aaKnown RBP20.12■□□□□ 0.81
USP35-203ENST00000529308 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
USP35-203ENST00000529308 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
USP35-203ENST00000529308 SYNJ1O43426 1573 aa20.1■□□□□ 0.81
USP35-203ENST00000529308 NCAPD3P42695 1498 aa20.09■□□□□ 0.81
USP35-203ENST00000529308 FTSJ3Q8IY81 847 aaKnown RBP20.09■□□□□ 0.81
USP35-203ENST00000529308 AQRO60306 1485 aaKnown RBP eCLIP20.09■□□□□ 0.816e-7■■■■■ 32.3
USP35-203ENST00000529308 LMOD2Q6P5Q4 547 aa20.08■□□□□ 0.81
USP35-203ENST00000529308 A0A0G2JS52 829 aa20.08■□□□□ 0.8
USP35-203ENST00000529308 ANP32EQ9BTT0 268 aa20.07■□□□□ 0.8
USP35-203ENST00000529308 MAPK8IP3Q9UPT6 1336 aa20.07■□□□□ 0.8
USP35-203ENST00000529308 MORC1Q86VD1 984 aa20.07■□□□□ 0.8
USP35-203ENST00000529308 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
USP35-203ENST00000529308 NESP48681 1621 aa20.05■□□□□ 0.8
USP35-203ENST00000529308 EIF5BO60841 1220 aaKnown RBP20.05■□□□□ 0.8
USP35-203ENST00000529308 KANK1Q14678 1352 aa20.04■□□□□ 0.8
USP35-203ENST00000529308 CCDC18Q5T9S5 1454 aa20.04■□□□□ 0.8
USP35-203ENST00000529308 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
USP35-203ENST00000529308 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
USP35-203ENST00000529308 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.8
USP35-203ENST00000529308 MYH16Q9H6N6 1097 aa20.02■□□□□ 0.8
USP35-203ENST00000529308 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.79
USP35-203ENST00000529308 KTN1Q86UP2 1357 aaKnown RBP20.01■□□□□ 0.79
USP35-203ENST00000529308 CCDC146Q8IYE0 955 aa20■□□□□ 0.79
USP35-203ENST00000529308 RCAN3Q9UKA8 241 aa19.99■□□□□ 0.79
USP35-203ENST00000529308 TRAK1Q9UPV9 953 aa19.98■□□□□ 0.79
USP35-203ENST00000529308 FGD6Q6ZV73 1430 aa19.96■□□□□ 0.79
USP35-203ENST00000529308 U2AF1L5P0DN76 240 aaPredicted RBP19.96■□□□□ 0.79
USP35-203ENST00000529308 U2AF1Q01081 240 aaKnown RBP eCLIP19.96■□□□□ 0.79
USP35-203ENST00000529308 PTPRGP23470 1445 aa19.96■□□□□ 0.79
USP35-203ENST00000529308 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
USP35-203ENST00000529308 PANK3Q9H999 370 aa19.94■□□□□ 0.78
USP35-203ENST00000529308 LRRC9Q6ZRR7 1453 aa19.94■□□□□ 0.78
USP35-203ENST00000529308 CFTRP13569 1480 aa19.93■□□□□ 0.78
USP35-203ENST00000529308 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
USP35-203ENST00000529308 RALBP1Q15311 655 aa19.93■□□□□ 0.78
USP35-203ENST00000529308 NLRP13Q86W25 1043 aa19.92■□□□□ 0.78
USP35-203ENST00000529308 WASHC2CQ9Y4E1 1318 aa19.91■□□□□ 0.78
USP35-203ENST00000529308 NOP58Q9Y2X3 529 aaKnown RBP19.91■□□□□ 0.78
USP35-203ENST00000529308 CLUAP1Q96AJ1 413 aa19.9■□□□□ 0.78
USP35-203ENST00000529308 PLIN1O60240 522 aa19.89■□□□□ 0.78
USP35-203ENST00000529308 PRXQ9BXM0 1461 aa19.89■□□□□ 0.77
USP35-203ENST00000529308 RSPH4AQ5TD94 716 aa19.88■□□□□ 0.77
USP35-203ENST00000529308 USP47Q96K76 1375 aa19.88■□□□□ 0.77
USP35-203ENST00000529308 TPRNQ4KMQ1 711 aa19.88■□□□□ 0.77
USP35-203ENST00000529308 RRP7AQ9Y3A4 280 aaKnown RBP19.87■□□□□ 0.77
USP35-203ENST00000529308 MYOM3Q5VTT5 1437 aa19.87■□□□□ 0.77
USP35-203ENST00000529308 DDRGK1Q96HY6 314 aa19.86■□□□□ 0.77
USP35-203ENST00000529308 BECN1Q14457 450 aa19.86■□□□□ 0.77
USP35-203ENST00000529308 ANP32BQ92688 251 aaKnown RBP19.86■□□□□ 0.77
USP35-203ENST00000529308 CCDC144AA2RUR9 1427 aa19.85■□□□□ 0.77
USP35-203ENST00000529308 CYB5RLQ6IPT4 315 aa19.85■□□□□ 0.77
USP35-203ENST00000529308 CUX1P39880 1505 aa19.85■□□□□ 0.77
USP35-203ENST00000529308 SPRYD3Q8NCJ5 442 aa19.84■□□□□ 0.77
USP35-203ENST00000529308 WASHC2AQ641Q2 1341 aa19.83■□□□□ 0.77
USP35-203ENST00000529308 APBB1O00213 710 aa19.83■□□□□ 0.76
USP35-203ENST00000529308 KIF7Q2M1P5 1343 aa19.82■□□□□ 0.76
USP35-203ENST00000529308 NCOA2Q15596 1464 aa19.81■□□□□ 0.76
USP35-203ENST00000529308 AFAP1Q8N556 730 aa19.81■□□□□ 0.76
USP35-203ENST00000529308 RTN4Q9NQC3 1192 aaKnown RBP19.81■□□□□ 0.76
USP35-203ENST00000529308 BCL2L13Q9BXK5 485 aa19.8■□□□□ 0.76
USP35-203ENST00000529308 HAP1P54257 671 aaPredicted RBP19.8■□□□□ 0.76
USP35-203ENST00000529308 GOLGA2Q08379 1002 aa19.79■□□□□ 0.76
USP35-203ENST00000529308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
USP35-203ENST00000529308 UACAQ9BZF9 1416 aa19.79■□□□□ 0.76
USP35-203ENST00000529308 CASKIN1Q8WXD9 1431 aa19.78■□□□□ 0.76
USP35-203ENST00000529308 NBPF8Q3BBV2 869 aa19.78■□□□□ 0.76
USP35-203ENST00000529308 RRBP1Q9P2E9 1410 aaKnown RBP19.76■□□□□ 0.75
USP35-203ENST00000529308 HDGFL2Q7Z4V5 671 aaPredicted RBP19.76■□□□□ 0.75
USP35-203ENST00000529308 KIF15Q9NS87 1388 aa19.76■□□□□ 0.75
USP35-203ENST00000529308 NCLP19338 710 aaKnown RBP19.75■□□□□ 0.75
USP35-203ENST00000529308 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
USP35-203ENST00000529308 PAK3O75914 559 aaPredicted RBP19.75■□□□□ 0.75
USP35-203ENST00000529308 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
USP35-203ENST00000529308 EXOC6Q8TAG9 804 aa19.74■□□□□ 0.75
USP35-203ENST00000529308 NBPF1Q3BBV0 1214 aa19.73■□□□□ 0.75
USP35-203ENST00000529308 ELL2O00472 640 aaPredicted RBP19.72■□□□□ 0.75
USP35-203ENST00000529308 APAF1O14727 1248 aa19.72■□□□□ 0.75
USP35-203ENST00000529308 CCDC184Q52MB2 194 aa19.72■□□□□ 0.75
USP35-203ENST00000529308 CCDC7Q96M83 1385 aa19.72■□□□□ 0.75
USP35-203ENST00000529308 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
USP35-203ENST00000529308 ANKRD50Q9ULJ7 1429 aa19.71■□□□□ 0.75
USP35-203ENST00000529308 TOP2BQ02880 1626 aa19.71■□□□□ 0.75
USP35-203ENST00000529308 ITPRIPQ8IWB1 547 aa19.7■□□□□ 0.74
USP35-203ENST00000529308 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
USP35-203ENST00000529308 ERICH6BQ5W0A0 696 aa19.69■□□□□ 0.74
USP35-203ENST00000529308 BICRAQ9NZM4 1560 aa19.68■□□□□ 0.74
USP35-203ENST00000529308 ZBED9Q6R2W3 1325 aa19.68■□□□□ 0.74
USP35-203ENST00000529308 MINK1Q8N4C8 1332 aaPredicted RBP19.68■□□□□ 0.74
USP35-203ENST00000529308 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
USP35-203ENST00000529308 SLKQ9H2G2 1235 aaPredicted RBP19.68■□□□□ 0.74
USP35-203ENST00000529308 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
USP35-203ENST00000529308 SMC4Q9NTJ3 1288 aa19.67■□□□□ 0.74
USP35-203ENST00000529308 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
USP35-203ENST00000529308 TAOK2Q9UL54 1235 aa19.67■□□□□ 0.74
USP35-203ENST00000529308 PNNQ9H307 717 aaKnown RBP19.65■□□□□ 0.74
USP35-203ENST00000529308 PRDM2Q13029 1718 aa19.64■□□□□ 0.73
USP35-203ENST00000529308 CC2D2AQ9P2K1 1620 aa19.64■□□□□ 0.73
USP35-203ENST00000529308 MS4A1P11836 297 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms