RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 CDC42BPBQ9Y5S2 1711 aa17.69■□□□□ 0.42
CAPN1-217ENST00000529133 FANCAO15360 1455 aa17.68■□□□□ 0.42
CAPN1-217ENST00000529133 TEX14Q8IWB6 1497 aa17.68■□□□□ 0.42
CAPN1-217ENST00000529133 CFDP1Q9UEE9 299 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-217ENST00000529133 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
CAPN1-217ENST00000529133 MIA2Q96PC5 1412 aa17.66■□□□□ 0.42
CAPN1-217ENST00000529133 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
CAPN1-217ENST00000529133 TSPOAP1O95153 1857 aa17.66■□□□□ 0.42
CAPN1-217ENST00000529133 CFAP74Q9C0B2 1584 aa17.66■□□□□ 0.42
CAPN1-217ENST00000529133 NEO1Q92859 1461 aa17.65■□□□□ 0.42
CAPN1-217ENST00000529133 SAMD9LQ8IVG5 1584 aa17.64■□□□□ 0.41
CAPN1-217ENST00000529133 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-217ENST00000529133 AKNAQ7Z591 1439 aa17.62■□□□□ 0.41
CAPN1-217ENST00000529133 CAMSAP2Q08AD1 1489 aa17.62■□□□□ 0.41
CAPN1-217ENST00000529133 PTPN23Q9H3S7 1636 aa17.61■□□□□ 0.41
CAPN1-217ENST00000529133 ZNF644Q9H582 1327 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-217ENST00000529133 TCOF1Q13428 1488 aaKnown RBP17.61■□□□□ 0.41
CAPN1-217ENST00000529133 ABCC1P33527 1531 aa17.61■□□□□ 0.41
CAPN1-217ENST00000529133 RRBP1Q9P2E9 1410 aaKnown RBP17.6■□□□□ 0.41
CAPN1-217ENST00000529133 ADGRL1O94910 1474 aa17.6■□□□□ 0.41
CAPN1-217ENST00000529133 PLEKHH2Q8IVE3 1493 aa17.59■□□□□ 0.41
CAPN1-217ENST00000529133 SYCP2Q9BX26 1530 aa17.57■□□□□ 0.4
CAPN1-217ENST00000529133 ARHGEF12Q9NZN5 1544 aa17.57■□□□□ 0.4
CAPN1-217ENST00000529133 KIAA1107Q9UPP5 1409 aa17.57■□□□□ 0.4
CAPN1-217ENST00000529133 SCAPERQ9BY12 1400 aa17.56■□□□□ 0.4
CAPN1-217ENST00000529133 MBD5Q9P267 1494 aa17.55■□□□□ 0.4
CAPN1-217ENST00000529133 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
CAPN1-217ENST00000529133 COL17A1Q9UMD9 1497 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-217ENST00000529133 POGZQ7Z3K3 1410 aa17.54■□□□□ 0.4
CAPN1-217ENST00000529133 DENND4BO75064 1496 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-217ENST00000529133 TRAPPC8Q9Y2L5 1435 aa17.53■□□□□ 0.4
CAPN1-217ENST00000529133 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
CAPN1-217ENST00000529133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.53■□□□□ 0.4
CAPN1-217ENST00000529133 HNRNPMP52272 730 aaKnown RBP eCLIP17.52■□□□□ 0.4
CAPN1-217ENST00000529133 FRMPD1Q5SYB0 1578 aa17.51■□□□□ 0.39
CAPN1-217ENST00000529133 KDM6BO15054 1643 aa17.5■□□□□ 0.39
CAPN1-217ENST00000529133 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
CAPN1-217ENST00000529133 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
CAPN1-217ENST00000529133 ZNF518AQ6AHZ1 1483 aa17.49■□□□□ 0.39
CAPN1-217ENST00000529133 ABCC5O15440 1437 aa17.48■□□□□ 0.39
CAPN1-217ENST00000529133 DAPK1P53355 1430 aa17.48■□□□□ 0.39
CAPN1-217ENST00000529133 RICTORQ6R327 1708 aa17.48■□□□□ 0.39
CAPN1-217ENST00000529133 RAPGEF3O95398 923 aa17.48■□□□□ 0.39
CAPN1-217ENST00000529133 KDM5CP41229 1560 aa17.48■□□□□ 0.39
CAPN1-217ENST00000529133 AFAP1Q8N556 730 aa17.46■□□□□ 0.39
CAPN1-217ENST00000529133 ZMYM4Q5VZL5 1548 aa17.46■□□□□ 0.39
CAPN1-217ENST00000529133 CROCC2H7BZ55 1655 aa17.45■□□□□ 0.38
CAPN1-217ENST00000529133 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
CAPN1-217ENST00000529133 SHANK2Q9UPX8 1470 aa17.44■□□□□ 0.38
CAPN1-217ENST00000529133 PTPRKQ15262 1439 aa17.43■□□□□ 0.38
CAPN1-217ENST00000529133 MAST1Q9Y2H9 1570 aa17.43■□□□□ 0.38
CAPN1-217ENST00000529133 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
CAPN1-217ENST00000529133 HECW2Q9P2P5 1572 aa17.42■□□□□ 0.38
CAPN1-217ENST00000529133 INO80Q9ULG1 1556 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-217ENST00000529133 C9orf84Q5VXU9 1444 aa17.42■□□□□ 0.38
CAPN1-217ENST00000529133 ITGAEP38570 1179 aa17.41■□□□□ 0.38
CAPN1-217ENST00000529133 MLH3Q9UHC1 1453 aa17.41■□□□□ 0.38
CAPN1-217ENST00000529133 SPAG9O60271 1321 aaKnown RBP17.41■□□□□ 0.38
CAPN1-217ENST00000529133 ATP7AQ04656 1500 aa17.4■□□□□ 0.38
CAPN1-217ENST00000529133 RTEL1-TNFRSF6BF6WH68 1400 aa17.39■□□□□ 0.38
CAPN1-217ENST00000529133 MAGI2Q86UL8 1455 aa17.39■□□□□ 0.37
CAPN1-217ENST00000529133 TSPY4P0CV99 314 aa17.39■□□□□ 0.37
CAPN1-217ENST00000529133 TSPY10P0CW01 314 aa17.39■□□□□ 0.37
CAPN1-217ENST00000529133 ADGRL2O95490 1459 aa17.37■□□□□ 0.37
CAPN1-217ENST00000529133 TRIM26Q12899 539 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-217ENST00000529133 KIDINS220Q9ULH0 1771 aa17.37■□□□□ 0.37
CAPN1-217ENST00000529133 YEATS2Q9ULM3 1422 aa17.37■□□□□ 0.37
CAPN1-217ENST00000529133 ARHGEF40Q8TER5 1519 aa17.37■□□□□ 0.37
CAPN1-217ENST00000529133 CHIC2Q9UKJ5 165 aa17.36■□□□□ 0.37
CAPN1-217ENST00000529133 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
CAPN1-217ENST00000529133 ABCA6Q8N139 1617 aa17.36■□□□□ 0.37
CAPN1-217ENST00000529133 ADGBQ8N7X0 1667 aa17.36■□□□□ 0.37
CAPN1-217ENST00000529133 MYT1LQ9UL68 1186 aa17.35■□□□□ 0.37
CAPN1-217ENST00000529133 DIP2CQ9Y2E4 1556 aa17.35■□□□□ 0.37
CAPN1-217ENST00000529133 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
CAPN1-217ENST00000529133 NCOA1Q15788 1441 aa17.33■□□□□ 0.36
CAPN1-217ENST00000529133 ANKRD30AQ9BXX3 1397 aa17.33■□□□□ 0.36
CAPN1-217ENST00000529133 KIF15Q9NS87 1388 aa17.3■□□□□ 0.36
CAPN1-217ENST00000529133 RRP7BPQ9NSQ0 103 aa17.29■□□□□ 0.36
CAPN1-217ENST00000529133 ATP10AO60312 1499 aa17.29■□□□□ 0.36
CAPN1-217ENST00000529133 A2MP01023 1474 aa17.28■□□□□ 0.36
CAPN1-217ENST00000529133 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
CAPN1-217ENST00000529133 DUOX2Q9NRD8 1548 aa17.27■□□□□ 0.36
CAPN1-217ENST00000529133 HFM1A2PYH4 1435 aa17.27■□□□□ 0.35
CAPN1-217ENST00000529133 NAIPQ13075 1403 aa17.26■□□□□ 0.35
CAPN1-217ENST00000529133 DHX29Q7Z478 1369 aaKnown RBP17.26■□□□□ 0.35
CAPN1-217ENST00000529133 GCC2Q8IWJ2 1684 aa17.26■□□□□ 0.35
CAPN1-217ENST00000529133 ERBINQ96RT1 1412 aa17.23■□□□□ 0.35
CAPN1-217ENST00000529133 SIGLEC1Q9BZZ2 1709 aa17.23■□□□□ 0.35
CAPN1-217ENST00000529133 ANKRD50Q9ULJ7 1429 aa17.22■□□□□ 0.35
CAPN1-217ENST00000529133 AGLP35573 1532 aa17.21■□□□□ 0.35
CAPN1-217ENST00000529133 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
CAPN1-217ENST00000529133 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
CAPN1-217ENST00000529133 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
CAPN1-217ENST00000529133 BCORL1Q5H9F3 1711 aa17.18■□□□□ 0.34
CAPN1-217ENST00000529133 KIF3BO15066 747 aa17.16■□□□□ 0.34
CAPN1-217ENST00000529133 RNF17Q9BXT8 1623 aaKnown RBP17.15■□□□□ 0.34
CAPN1-217ENST00000529133 RAB3GAP2Q9H2M9 1393 aa17.15■□□□□ 0.34
CAPN1-217ENST00000529133 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-217ENST00000529133 MROH1Q8NDA8 1641 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms