RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 NISCHQ9Y2I1 1504 aa27.2■■□□□ 1.94
CAPN1-217ENST00000529133 CCDC180Q9P1Z9 1646 aa24■■□□□ 1.43
CAPN1-217ENST00000529133 ABCC9O60706 1549 aa23.13■■□□□ 1.29
CAPN1-217ENST00000529133 ZCCHC6Q5VYS8 1495 aaKnown RBP22.76■■□□□ 1.23
CAPN1-217ENST00000529133 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.2
CAPN1-217ENST00000529133 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
CAPN1-217ENST00000529133 NACADO15069 1562 aa22.47■■□□□ 1.19
CAPN1-217ENST00000529133 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
CAPN1-217ENST00000529133 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
CAPN1-217ENST00000529133 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
CAPN1-217ENST00000529133 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
CAPN1-217ENST00000529133 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
CAPN1-217ENST00000529133 SHROOM4Q9ULL8 1493 aa21.72■■□□□ 1.07
CAPN1-217ENST00000529133 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
CAPN1-217ENST00000529133 CECR2Q9BXF3 1484 aa21.15■□□□□ 0.98
CAPN1-217ENST00000529133 EIF4G1Q04637 1599 aaKnown RBP21.12■□□□□ 0.97
CAPN1-217ENST00000529133 BAZ1AQ9NRL2 1556 aaPredicted RBP21.05■□□□□ 0.96
CAPN1-217ENST00000529133 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
CAPN1-217ENST00000529133 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
CAPN1-217ENST00000529133 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
CAPN1-217ENST00000529133 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
CAPN1-217ENST00000529133 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
CAPN1-217ENST00000529133 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
CAPN1-217ENST00000529133 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
CAPN1-217ENST00000529133 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
CAPN1-217ENST00000529133 WIZO95785 1651 aa20.75■□□□□ 0.91
CAPN1-217ENST00000529133 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
CAPN1-217ENST00000529133 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
CAPN1-217ENST00000529133 BAZ1BQ9UIG0 1483 aaKnown RBP20.66■□□□□ 0.9
CAPN1-217ENST00000529133 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
CAPN1-217ENST00000529133 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.88
CAPN1-217ENST00000529133 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
CAPN1-217ENST00000529133 CADPSQ9ULU8 1353 aa20.14■□□□□ 0.81
CAPN1-217ENST00000529133 NESP48681 1621 aa20.13■□□□□ 0.81
CAPN1-217ENST00000529133 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
CAPN1-217ENST00000529133 CFTRP13569 1480 aa20.11■□□□□ 0.81
CAPN1-217ENST00000529133 PDS5BQ9NTI5 1447 aa19.96■□□□□ 0.79
CAPN1-217ENST00000529133 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
CAPN1-217ENST00000529133 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
CAPN1-217ENST00000529133 ERCC6Q03468 1493 aa19.89■□□□□ 0.77
CAPN1-217ENST00000529133 KIF21AQ7Z4S6 1674 aa19.88■□□□□ 0.77
CAPN1-217ENST00000529133 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
CAPN1-217ENST00000529133 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
CAPN1-217ENST00000529133 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
CAPN1-217ENST00000529133 URB2Q14146 1524 aaKnown RBP19.71■□□□□ 0.75
CAPN1-217ENST00000529133 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
CAPN1-217ENST00000529133 WDR62O43379 1518 aa19.69■□□□□ 0.74
CAPN1-217ENST00000529133 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
CAPN1-217ENST00000529133 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
CAPN1-217ENST00000529133 CUX1P39880 1505 aa19.66■□□□□ 0.74
CAPN1-217ENST00000529133 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
CAPN1-217ENST00000529133 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
CAPN1-217ENST00000529133 TOP2BQ02880 1626 aa19.58■□□□□ 0.72
CAPN1-217ENST00000529133 BIVM-ERCC5R4GMW8 1640 aa19.58■□□□□ 0.72
CAPN1-217ENST00000529133 CUX2O14529 1486 aa19.54■□□□□ 0.72
CAPN1-217ENST00000529133 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
CAPN1-217ENST00000529133 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-217ENST00000529133 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
CAPN1-217ENST00000529133 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
CAPN1-217ENST00000529133 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
CAPN1-217ENST00000529133 SOGA1O94964 1423 aa19.42■□□□□ 0.7
CAPN1-217ENST00000529133 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
CAPN1-217ENST00000529133 TARBP1Q13395 1621 aaKnown RBP19.41■□□□□ 0.7
CAPN1-217ENST00000529133 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
CAPN1-217ENST00000529133 WDR97A6NE52 1622 aa19.35■□□□□ 0.69
CAPN1-217ENST00000529133 ZNF608Q9ULD9 1512 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-217ENST00000529133 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
CAPN1-217ENST00000529133 EIF4G3O43432 1585 aaKnown RBP19.26■□□□□ 0.67
CAPN1-217ENST00000529133 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
CAPN1-217ENST00000529133 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.674e-7■■■■□ 19.3
CAPN1-217ENST00000529133 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
CAPN1-217ENST00000529133 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
CAPN1-217ENST00000529133 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
CAPN1-217ENST00000529133 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
CAPN1-217ENST00000529133 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
CAPN1-217ENST00000529133 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
CAPN1-217ENST00000529133 EEA1Q15075 1411 aa19.1■□□□□ 0.65
CAPN1-217ENST00000529133 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
CAPN1-217ENST00000529133 IGF1RP08069 1367 aa19.08■□□□□ 0.65
CAPN1-217ENST00000529133 MAGI1Q96QZ7 1491 aaPredicted RBP19.07■□□□□ 0.64
CAPN1-217ENST00000529133 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
CAPN1-217ENST00000529133 FAM9AQ8IZU1 332 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-217ENST00000529133 CUL7Q14999 1698 aa19.01■□□□□ 0.63
CAPN1-217ENST00000529133 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
CAPN1-217ENST00000529133 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
CAPN1-217ENST00000529133 SYNJ2O15056 1496 aa18.99■□□□□ 0.63
CAPN1-217ENST00000529133 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
CAPN1-217ENST00000529133 PRXQ9BXM0 1461 aa18.96■□□□□ 0.63
CAPN1-217ENST00000529133 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
CAPN1-217ENST00000529133 CHD1O14646 1710 aa18.92■□□□□ 0.62
CAPN1-217ENST00000529133 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
CAPN1-217ENST00000529133 CHMP7Q8WUX9 453 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-217ENST00000529133 FBLN2P98095 1184 aa18.9■□□□□ 0.62
CAPN1-217ENST00000529133 KIF21BO75037 1637 aa18.89■□□□□ 0.61
CAPN1-217ENST00000529133 NUP160Q12769 1436 aa18.83■□□□□ 0.61
CAPN1-217ENST00000529133 CEP170Q5SW79 1584 aa18.82■□□□□ 0.6
CAPN1-217ENST00000529133 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
CAPN1-217ENST00000529133 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
CAPN1-217ENST00000529133 OSCARQ8IYS5 282 aa18.76■□□□□ 0.59
CAPN1-217ENST00000529133 EHMT2Q96KQ7 1210 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms