RNA–Protein interactions for RNA: ENST00000528950.1

AMBRA1-206, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5 BASIC

Gene AMBRA1, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-206ENST00000528950 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
AMBRA1-206ENST00000528950 NUDCQ9Y266 331 aa11.52□□□□□ -0.56
AMBRA1-206ENST00000528950 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.57
AMBRA1-206ENST00000528950 PDE4AP27815 886 aa11.52□□□□□ -0.57
AMBRA1-206ENST00000528950 FOXD1Q16676 465 aa11.52□□□□□ -0.57
AMBRA1-206ENST00000528950 ABCA10Q8WWZ4 1543 aa11.51□□□□□ -0.57
AMBRA1-206ENST00000528950 GSE1Q14687 1217 aa11.51□□□□□ -0.57
AMBRA1-206ENST00000528950 PHLDB1Q86UU1 1377 aa11.51□□□□□ -0.57
AMBRA1-206ENST00000528950 TARBP1Q13395 1621 aaKnown RBP11.51□□□□□ -0.57
AMBRA1-206ENST00000528950 GRIN2BQ13224 1484 aa11.5□□□□□ -0.57
AMBRA1-206ENST00000528950 C11orf95C9JLR9 678 aaPredicted RBP11.5□□□□□ -0.57
AMBRA1-206ENST00000528950 EIF4G3O43432 1585 aaKnown RBP11.49□□□□□ -0.57
AMBRA1-206ENST00000528950 EXOC6Q8TAG9 804 aa11.49□□□□□ -0.57
AMBRA1-206ENST00000528950 SNAPC4Q5SXM2 1469 aa11.49□□□□□ -0.57
AMBRA1-206ENST00000528950 USP35Q9P2H5 1018 aa11.49□□□□□ -0.57
AMBRA1-206ENST00000528950 TCERG1O14776 1098 aaKnown RBP11.47□□□□□ -0.57
AMBRA1-206ENST00000528950 ARID4BQ4LE39 1312 aaPredicted RBP11.47□□□□□ -0.57
AMBRA1-206ENST00000528950 WASHC2CQ9Y4E1 1318 aa11.46□□□□□ -0.57
AMBRA1-206ENST00000528950 MTUS2Q5JR59 1369 aa11.46□□□□□ -0.57
AMBRA1-206ENST00000528950 FRAT1Q92837 279 aaPredicted RBP11.46□□□□□ -0.57
AMBRA1-206ENST00000528950 BECN1Q14457 450 aa11.46□□□□□ -0.58
AMBRA1-206ENST00000528950 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
AMBRA1-206ENST00000528950 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.45□□□□□ -0.58
AMBRA1-206ENST00000528950 SKAP1Q86WV1 359 aa11.45□□□□□ -0.58
AMBRA1-206ENST00000528950 L3MBTL2Q969R5 705 aa11.45□□□□□ -0.58
AMBRA1-206ENST00000528950 NFKBIBQ15653 356 aa11.44□□□□□ -0.58
AMBRA1-206ENST00000528950 IGF1RP08069 1367 aa11.44□□□□□ -0.58
AMBRA1-206ENST00000528950 CARMIL1Q5VZK9 1371 aa11.44□□□□□ -0.58
AMBRA1-206ENST00000528950 VSIG10Q8N0Z9 540 aa11.44□□□□□ -0.58
AMBRA1-206ENST00000528950 RGS3P49796 1198 aa11.43□□□□□ -0.58
AMBRA1-206ENST00000528950 ARHGAP35Q9NRY4 1499 aa11.42□□□□□ -0.58
AMBRA1-206ENST00000528950 PLIN1O60240 522 aa11.42□□□□□ -0.58
AMBRA1-206ENST00000528950 RCAN3Q9UKA8 241 aa11.42□□□□□ -0.58
AMBRA1-206ENST00000528950 CNTLNQ9NXG0 1405 aa11.42□□□□□ -0.58
AMBRA1-206ENST00000528950 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
AMBRA1-206ENST00000528950 PNNQ9H307 717 aaKnown RBP11.4□□□□□ -0.58
AMBRA1-206ENST00000528950 CCDC18Q5T9S5 1454 aa11.4□□□□□ -0.58
AMBRA1-206ENST00000528950 PODXL2Q9NZ53 605 aa11.4□□□□□ -0.58
AMBRA1-206ENST00000528950 FHAD1B1AJZ9 1412 aa11.4□□□□□ -0.59
AMBRA1-206ENST00000528950 RSPH6AQ9H0K4 717 aa11.39□□□□□ -0.59
AMBRA1-206ENST00000528950 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
AMBRA1-206ENST00000528950 SYNJ2O15056 1496 aa11.39□□□□□ -0.59
AMBRA1-206ENST00000528950 CCDC7Q96M83 1385 aa11.39□□□□□ -0.59
AMBRA1-206ENST00000528950 RRP1P56182 461 aaKnown RBP11.39□□□□□ -0.59
AMBRA1-206ENST00000528950 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
AMBRA1-206ENST00000528950 BACH2Q9BYV9 841 aa11.37□□□□□ -0.59
AMBRA1-206ENST00000528950 LRRC9Q6ZRR7 1453 aa11.37□□□□□ -0.59
AMBRA1-206ENST00000528950 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
AMBRA1-206ENST00000528950 FRAT2O75474 233 aaPredicted RBP11.37□□□□□ -0.59
AMBRA1-206ENST00000528950 KIF7Q2M1P5 1343 aa11.36□□□□□ -0.59
AMBRA1-206ENST00000528950 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
AMBRA1-206ENST00000528950 PRXQ9BXM0 1461 aa11.36□□□□□ -0.59
AMBRA1-206ENST00000528950 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
AMBRA1-206ENST00000528950 HSP90AA2PQ14568 343 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-206ENST00000528950 SLKQ9H2G2 1235 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-206ENST00000528950 L1TD1Q5T7N2 865 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-206ENST00000528950 MPHOSPH9Q99550 1183 aa11.34□□□□□ -0.59
AMBRA1-206ENST00000528950 FHOD3Q2V2M9 1422 aa11.34□□□□□ -0.59
AMBRA1-206ENST00000528950 SMG6Q86US8 1419 aaKnown RBP11.34□□□□□ -0.59
AMBRA1-206ENST00000528950 GRIN2AQ12879 1464 aa11.34□□□□□ -0.59
AMBRA1-206ENST00000528950 DNTTIP2Q5QJE6 756 aaKnown RBP11.33□□□□□ -0.6
AMBRA1-206ENST00000528950 ZMYND15Q9H091 742 aa11.33□□□□□ -0.6
AMBRA1-206ENST00000528950 CYB5RLQ6IPT4 315 aa11.33□□□□□ -0.6
AMBRA1-206ENST00000528950 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
AMBRA1-206ENST00000528950 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
AMBRA1-206ENST00000528950 GZF1Q9H116 711 aaPredicted RBP11.33□□□□□ -0.6
AMBRA1-206ENST00000528950 SPRYD3Q8NCJ5 442 aa11.32□□□□□ -0.6
AMBRA1-206ENST00000528950 FMN1Q68DA7 1419 aa11.32□□□□□ -0.6
AMBRA1-206ENST00000528950 UACAQ9BZF9 1416 aa11.32□□□□□ -0.6
AMBRA1-206ENST00000528950 MS4A1P11836 297 aa11.31□□□□□ -0.6
AMBRA1-206ENST00000528950 CHD1O14646 1710 aa11.31□□□□□ -0.6
AMBRA1-206ENST00000528950 TIAM1Q13009 1591 aa11.31□□□□□ -0.6
AMBRA1-206ENST00000528950 GOLGA6L22H0YM25 854 aa11.31□□□□□ -0.6
AMBRA1-206ENST00000528950 NCLP19338 710 aaKnown RBP11.31□□□□□ -0.6
AMBRA1-206ENST00000528950 ADAMTS12P58397 1594 aa11.3□□□□□ -0.6
AMBRA1-206ENST00000528950 CDK11BP21127 795 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-206ENST00000528950 NBPF8Q3BBV2 869 aa11.3□□□□□ -0.6
AMBRA1-206ENST00000528950 WDR43Q15061 677 aaKnown RBP eCLIP11.29□□□□□ -0.6
AMBRA1-206ENST00000528950 CDCA7LQ96GN5 454 aa11.29□□□□□ -0.6
AMBRA1-206ENST00000528950 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
AMBRA1-206ENST00000528950 ARID3AQ99856 593 aa11.29□□□□□ -0.6
AMBRA1-206ENST00000528950 PTMAP06454 111 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-206ENST00000528950 CARD11Q9BXL7 1154 aa11.28□□□□□ -0.6
AMBRA1-206ENST00000528950 CC2D1BQ5T0F9 858 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-206ENST00000528950 ZNF777Q9ULD5 760 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-206ENST00000528950 FAM43AQ8N2R8 423 aa11.27□□□□□ -0.6
AMBRA1-206ENST00000528950 FGD6Q6ZV73 1430 aa11.26□□□□□ -0.61
AMBRA1-206ENST00000528950 CUL7Q14999 1698 aa11.26□□□□□ -0.61
AMBRA1-206ENST00000528950 PNISRQ8TF01 805 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-206ENST00000528950 MSNP26038 577 aaKnown RBP11.25□□□□□ -0.61
AMBRA1-206ENST00000528950 POGKQ9P215 609 aa11.24□□□□□ -0.61
AMBRA1-206ENST00000528950 FAM161AQ3B820 660 aa11.24□□□□□ -0.61
AMBRA1-206ENST00000528950 PRG4Q92954 1404 aaPredicted RBP11.23□□□□□ -0.61
AMBRA1-206ENST00000528950 NUP160Q12769 1436 aa11.23□□□□□ -0.61
AMBRA1-206ENST00000528950 DCAF11Q8TEB1 546 aa11.22□□□□□ -0.61
AMBRA1-206ENST00000528950 CEP170Q5SW79 1584 aa11.21□□□□□ -0.61
AMBRA1-206ENST00000528950 KIAA0586Q9BVV6 1533 aa11.21□□□□□ -0.61
AMBRA1-206ENST00000528950 NCOA1Q15788 1441 aa11.2□□□□□ -0.62
AMBRA1-206ENST00000528950 GOLGA6L3A6NEY3 463 aa11.2□□□□□ -0.62
AMBRA1-206ENST00000528950 AAMPQ13685 434 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms