RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 HECW1Q76N89 1606 aa10.36□□□□□ -0.75
C11orf54-207ENST00000528288 CHMP7Q8WUX9 453 aaPredicted RBP10.35□□□□□ -0.75
C11orf54-207ENST00000528288 PRG4Q92954 1404 aaPredicted RBP10.35□□□□□ -0.75
C11orf54-207ENST00000528288 CFDP1Q9UEE9 299 aaPredicted RBP10.34□□□□□ -0.75
C11orf54-207ENST00000528288 ADAMTS12P58397 1594 aa10.34□□□□□ -0.75
C11orf54-207ENST00000528288 TCOF1Q13428 1488 aaKnown RBP10.34□□□□□ -0.75
C11orf54-207ENST00000528288 WDR62O43379 1518 aa10.34□□□□□ -0.75
C11orf54-207ENST00000528288 MRC2Q9UBG0 1479 aa10.33□□□□□ -0.76
C11orf54-207ENST00000528288 ABCC5O15440 1437 aa10.33□□□□□ -0.76
C11orf54-207ENST00000528288 MRS2Q9HD23 443 aa10.33□□□□□ -0.76
C11orf54-207ENST00000528288 DAPK1P53355 1430 aa10.33□□□□□ -0.76
C11orf54-207ENST00000528288 RBM19Q9Y4C8 960 aaKnown RBP10.32□□□□□ -0.76
C11orf54-207ENST00000528288 NUP153P49790 1475 aaKnown RBP10.31□□□□□ -0.76
C11orf54-207ENST00000528288 ANKRD30BQ9BXX2 1392 aa10.31□□□□□ -0.76
C11orf54-207ENST00000528288 DISP1Q96F81 1524 aa10.31□□□□□ -0.76
C11orf54-207ENST00000528288 CDK11AQ9UQ88 783 aaPredicted RBP10.31□□□□□ -0.76
C11orf54-207ENST00000528288 PLB1Q6P1J6 1458 aa10.3□□□□□ -0.76
C11orf54-207ENST00000528288 PRKRIP1Q9H875 184 aaPredicted RBP10.3□□□□□ -0.76
C11orf54-207ENST00000528288 MIA2Q96PC5 1412 aa10.3□□□□□ -0.76
C11orf54-207ENST00000528288 KDM2AQ9Y2K7 1162 aa10.3□□□□□ -0.76
C11orf54-207ENST00000528288 CCDC7Q96M83 1385 aa10.3□□□□□ -0.76
C11orf54-207ENST00000528288 PKD2Q13563 968 aa10.3□□□□□ -0.76
C11orf54-207ENST00000528288 KIF7Q2M1P5 1343 aa10.3□□□□□ -0.76
C11orf54-207ENST00000528288 GCC2Q8IWJ2 1684 aa10.29□□□□□ -0.76
C11orf54-207ENST00000528288 CNTLNQ9NXG0 1405 aa10.28□□□□□ -0.76
C11orf54-207ENST00000528288 KIAA0586Q9BVV6 1533 aa10.27□□□□□ -0.76
C11orf54-207ENST00000528288 JPH4Q96JJ6 628 aa10.27□□□□□ -0.77
C11orf54-207ENST00000528288 KIAA0556O60303 1618 aa10.26□□□□□ -0.77
C11orf54-207ENST00000528288 ERCC6Q03468 1493 aa10.26□□□□□ -0.77
C11orf54-207ENST00000528288 MYT1Q01538 1121 aa10.26□□□□□ -0.77
C11orf54-207ENST00000528288 GRIN2AQ12879 1464 aa10.26□□□□□ -0.77
C11orf54-207ENST00000528288 IFT140Q96RY7 1462 aa10.26□□□□□ -0.77
C11orf54-207ENST00000528288 HNRNPMP52272 730 aaKnown RBP eCLIP10.25□□□□□ -0.77
C11orf54-207ENST00000528288 RPRD2Q5VT52 1461 aaKnown RBP10.25□□□□□ -0.77
C11orf54-207ENST00000528288 B4GALNT3Q6L9W6 998 aa10.25□□□□□ -0.77
C11orf54-207ENST00000528288 NCOA1Q15788 1441 aa10.25□□□□□ -0.77
C11orf54-207ENST00000528288 ANP32EQ9BTT0 268 aa10.24□□□□□ -0.77
C11orf54-207ENST00000528288 AKNAQ7Z591 1439 aa10.24□□□□□ -0.77
C11orf54-207ENST00000528288 CAMSAP2Q08AD1 1489 aa10.24□□□□□ -0.77
C11orf54-207ENST00000528288 RAPGEF6Q8TEU7 1601 aa10.23□□□□□ -0.77
C11orf54-207ENST00000528288 TEX14Q8IWB6 1497 aa10.23□□□□□ -0.77
C11orf54-207ENST00000528288 ROCK1Q13464 1354 aa10.23□□□□□ -0.77
C11orf54-207ENST00000528288 PLEKHD1A6NEE1 506 aa10.23□□□□□ -0.77
C11orf54-207ENST00000528288 KIF14Q15058 1648 aa10.23□□□□□ -0.77
C11orf54-207ENST00000528288 TROQ12816 1431 aaPredicted RBP10.22□□□□□ -0.77
C11orf54-207ENST00000528288 PZPP20742 1482 aa10.22□□□□□ -0.77
C11orf54-207ENST00000528288 EIF4G3O43432 1585 aaKnown RBP10.22□□□□□ -0.77
C11orf54-207ENST00000528288 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
C11orf54-207ENST00000528288 GPATCH8Q9UKJ3 1502 aaKnown RBP10.22□□□□□ -0.77
C11orf54-207ENST00000528288 NUP155O75694 1391 aa10.22□□□□□ -0.77
C11orf54-207ENST00000528288 SALL2Q9Y467 1007 aaPredicted RBP10.21□□□□□ -0.77
C11orf54-207ENST00000528288 USP47Q96K76 1375 aa10.2□□□□□ -0.78
C11orf54-207ENST00000528288 RGL3Q3MIN7 710 aa10.2□□□□□ -0.78
C11orf54-207ENST00000528288 DCAF11Q8TEB1 546 aa10.2□□□□□ -0.78
C11orf54-207ENST00000528288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.2□□□□□ -0.78
C11orf54-207ENST00000528288 CARD11Q9BXL7 1154 aa10.2□□□□□ -0.78
C11orf54-207ENST00000528288 CEP170Q5SW79 1584 aa10.2□□□□□ -0.78
C11orf54-207ENST00000528288 MSH5O43196 834 aa10.19□□□□□ -0.78
C11orf54-207ENST00000528288 SPATA31E1Q6ZUB1 1445 aa10.19□□□□□ -0.78
C11orf54-207ENST00000528288 TSPY4P0CV99 314 aa10.18□□□□□ -0.78
C11orf54-207ENST00000528288 TSPY10P0CW01 314 aa10.18□□□□□ -0.78
C11orf54-207ENST00000528288 ANKRD30AQ9BXX3 1397 aa10.18□□□□□ -0.78
C11orf54-207ENST00000528288 ANKRD50Q9ULJ7 1429 aa10.18□□□□□ -0.78
C11orf54-207ENST00000528288 ST20-MTHFSA0A0A6YYL1 179 aa10.18□□□□□ -0.78
C11orf54-207ENST00000528288 KIAA1107Q9UPP5 1409 aa10.18□□□□□ -0.78
C11orf54-207ENST00000528288 CARMIL2Q6F5E8 1435 aa10.16□□□□□ -0.78
C11orf54-207ENST00000528288 PPP4R2Q9NY27 417 aa10.16□□□□□ -0.78
C11orf54-207ENST00000528288 ZBED9Q6R2W3 1325 aa10.16□□□□□ -0.78
C11orf54-207ENST00000528288 SYNJ2O15056 1496 aa10.15□□□□□ -0.78
C11orf54-207ENST00000528288 TMC1Q8TDI8 760 aa10.15□□□□□ -0.78
C11orf54-207ENST00000528288 DHX29Q7Z478 1369 aaKnown RBP10.15□□□□□ -0.78
C11orf54-207ENST00000528288 BCORL1Q5H9F3 1711 aa10.14□□□□□ -0.79
C11orf54-207ENST00000528288 ATP10BO94823 1461 aa10.14□□□□□ -0.79
C11orf54-207ENST00000528288 C9orf84Q5VXU9 1444 aa10.14□□□□□ -0.79
C11orf54-207ENST00000528288 KIF15Q9NS87 1388 aa10.13□□□□□ -0.79
C11orf54-207ENST00000528288 NBPF1Q3BBV0 1214 aa10.13□□□□□ -0.79
C11orf54-207ENST00000528288 MAGI1Q96QZ7 1491 aaPredicted RBP10.12□□□□□ -0.79
C11orf54-207ENST00000528288 MBD5Q9P267 1494 aa10.1□□□□□ -0.79
C11orf54-207ENST00000528288 PNISRQ8TF01 805 aaKnown RBP10.1□□□□□ -0.79
C11orf54-207ENST00000528288 PTPRGP23470 1445 aa10.09□□□□□ -0.79
C11orf54-207ENST00000528288 ROCK2O75116 1388 aaKnown RBP10.09□□□□□ -0.79
C11orf54-207ENST00000528288 CC2D1BQ5T0F9 858 aaKnown RBP10.09□□□□□ -0.79
C11orf54-207ENST00000528288 NUP160Q12769 1436 aa10.09□□□□□ -0.79
C11orf54-207ENST00000528288 ITSN2Q9NZM3 1697 aa10.09□□□□□ -0.79
C11orf54-207ENST00000528288 ERICH6Q7L0X2 663 aa10.08□□□□□ -0.8
C11orf54-207ENST00000528288 ADGRL2O95490 1459 aa10.08□□□□□ -0.8
C11orf54-207ENST00000528288 NUDCQ9Y266 331 aa10.08□□□□□ -0.8
C11orf54-207ENST00000528288 ABCC10Q5T3U5 1492 aa10.08□□□□□ -0.8
C11orf54-207ENST00000528288 CDC42BPAQ5VT25 1732 aa10.08□□□□□ -0.8
C11orf54-207ENST00000528288 ADGBQ8N7X0 1667 aa10.07□□□□□ -0.8
C11orf54-207ENST00000528288 CCDC136Q96JN2 1154 aa10.07□□□□□ -0.8
C11orf54-207ENST00000528288 KDM5CP41229 1560 aa10.06□□□□□ -0.8
C11orf54-207ENST00000528288 CROCC2H7BZ55 1655 aa10.05□□□□□ -0.8
C11orf54-207ENST00000528288 ABCA8O94911 1581 aa10.05□□□□□ -0.8
C11orf54-207ENST00000528288 CDCA7LQ96GN5 454 aa10.04□□□□□ -0.8
C11orf54-207ENST00000528288 RALGAPBQ86X10 1494 aa10.04□□□□□ -0.8
C11orf54-207ENST00000528288 ADCY10Q96PN6 1610 aa10.04□□□□□ -0.8
C11orf54-207ENST00000528288 SMG6Q86US8 1419 aaKnown RBP10.03□□□□□ -0.8
C11orf54-207ENST00000528288 ERICH6BQ5W0A0 696 aa10.03□□□□□ -0.8
C11orf54-207ENST00000528288 CCDC144AA2RUR9 1427 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms