RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 KCNH8Q96L42 1107 aa11.65□□□□□ -0.54
PTP4A2-210ENST00000528253 EPRSP07814 1512 aaKnown RBP11.65□□□□□ -0.55
PTP4A2-210ENST00000528253 WDR7Q9Y4E6 1490 aa11.64□□□□□ -0.55
PTP4A2-210ENST00000528253 ARID3CA6NKF2 412 aa11.64□□□□□ -0.55
PTP4A2-210ENST00000528253 POLA2Q14181 598 aa11.63□□□□□ -0.55
PTP4A2-210ENST00000528253 ATP10BO94823 1461 aa11.63□□□□□ -0.55
PTP4A2-210ENST00000528253 MAP3K4Q9Y6R4 1608 aa11.61□□□□□ -0.55
PTP4A2-210ENST00000528253 REM2Q8IYK8 340 aaPredicted RBP11.61□□□□□ -0.55
PTP4A2-210ENST00000528253 FMN1Q68DA7 1419 aa11.6□□□□□ -0.55
PTP4A2-210ENST00000528253 CFAP43Q8NDM7 1665 aa11.6□□□□□ -0.55
PTP4A2-210ENST00000528253 ARHGAP35Q9NRY4 1499 aa11.6□□□□□ -0.55
PTP4A2-210ENST00000528253 ATP1B4Q9UN42 357 aaPredicted RBP11.6□□□□□ -0.55
PTP4A2-210ENST00000528253 PPRC1Q5VV67 1664 aaKnown RBP11.59□□□□□ -0.55
PTP4A2-210ENST00000528253 NUP153P49790 1475 aaKnown RBP11.59□□□□□ -0.55
PTP4A2-210ENST00000528253 PLEKHD1A6NEE1 506 aa11.59□□□□□ -0.55
PTP4A2-210ENST00000528253 SPDYE4A6NLX3 237 aa11.59□□□□□ -0.55
PTP4A2-210ENST00000528253 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
PTP4A2-210ENST00000528253 KDM6BO15054 1643 aa11.58□□□□□ -0.56
PTP4A2-210ENST00000528253 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
PTP4A2-210ENST00000528253 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
PTP4A2-210ENST00000528253 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTP4A2-210ENST00000528253 MKRN4PQ13434 485 aaPredicted RBP11.57□□□□□ -0.56
PTP4A2-210ENST00000528253 CD109Q6YHK3 1445 aa11.57□□□□□ -0.56
PTP4A2-210ENST00000528253 HECW1Q76N89 1606 aa11.55□□□□□ -0.56
PTP4A2-210ENST00000528253 CDK11AQ9UQ88 783 aaPredicted RBP11.54□□□□□ -0.56
PTP4A2-210ENST00000528253 CLIP1P30622 1438 aa11.53□□□□□ -0.56
PTP4A2-210ENST00000528253 PITPNM1O00562 1244 aa11.53□□□□□ -0.56
PTP4A2-210ENST00000528253 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
PTP4A2-210ENST00000528253 MAGI3Q5TCQ9 1506 aa11.53□□□□□ -0.56
PTP4A2-210ENST00000528253 ABCA9Q8IUA7 1624 aa11.53□□□□□ -0.56
PTP4A2-210ENST00000528253 CDK13Q14004 1512 aaKnown RBP11.5□□□□□ -0.57
PTP4A2-210ENST00000528253 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
PTP4A2-210ENST00000528253 LOC105371045A0A1W2PR82 267 aa11.49□□□□□ -0.57
PTP4A2-210ENST00000528253 PHLDB1Q86UU1 1377 aa11.48□□□□□ -0.57
PTP4A2-210ENST00000528253 CASKIN1Q8WXD9 1431 aa11.48□□□□□ -0.57
PTP4A2-210ENST00000528253 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.57
PTP4A2-210ENST00000528253 SLC24A1O60721 1099 aa11.46□□□□□ -0.57
PTP4A2-210ENST00000528253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTP4A2-210ENST00000528253 CCDC18Q5T9S5 1454 aa11.45□□□□□ -0.58
PTP4A2-210ENST00000528253 COL17A1Q9UMD9 1497 aaPredicted RBP11.45□□□□□ -0.58
PTP4A2-210ENST00000528253 CEP162Q5TB80 1403 aa11.45□□□□□ -0.58
PTP4A2-210ENST00000528253 NEO1Q92859 1461 aa11.44□□□□□ -0.58
PTP4A2-210ENST00000528253 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
PTP4A2-210ENST00000528253 ARAP3Q8WWN8 1544 aa11.44□□□□□ -0.58
PTP4A2-210ENST00000528253 MYO5CQ9NQX4 1742 aa11.43□□□□□ -0.58
PTP4A2-210ENST00000528253 CFAP74Q9C0B2 1584 aa11.43□□□□□ -0.58
PTP4A2-210ENST00000528253 PROM2Q8N271 834 aa11.43□□□□□ -0.58
PTP4A2-210ENST00000528253 TROQ12816 1431 aaPredicted RBP11.43□□□□□ -0.58
PTP4A2-210ENST00000528253 KIF14Q15058 1648 aa11.42□□□□□ -0.58
PTP4A2-210ENST00000528253 TTC37Q6PGP7 1564 aa11.42□□□□□ -0.58
PTP4A2-210ENST00000528253 FANCAO15360 1455 aa11.41□□□□□ -0.58
PTP4A2-210ENST00000528253 PLCH2O75038 1416 aa11.4□□□□□ -0.58
PTP4A2-210ENST00000528253 AKNAQ7Z591 1439 aa11.4□□□□□ -0.58
PTP4A2-210ENST00000528253 EFCAB2Q5VUJ9 269 aa11.39□□□□□ -0.59
PTP4A2-210ENST00000528253 RAPGEF3O95398 923 aa11.38□□□□□ -0.59
PTP4A2-210ENST00000528253 GABBR2O75899 941 aa11.37□□□□□ -0.59
PTP4A2-210ENST00000528253 CDC42BPBQ9Y5S2 1711 aa11.37□□□□□ -0.59
PTP4A2-210ENST00000528253 RICTORQ6R327 1708 aa11.36□□□□□ -0.59
PTP4A2-210ENST00000528253 DENND4BO75064 1496 aaPredicted RBP11.36□□□□□ -0.59
PTP4A2-210ENST00000528253 ARHGAP5Q13017 1502 aa11.35□□□□□ -0.59
PTP4A2-210ENST00000528253 CDC42BPAQ5VT25 1732 aa11.35□□□□□ -0.59
PTP4A2-210ENST00000528253 MTUS2Q5JR59 1369 aa11.35□□□□□ -0.59
PTP4A2-210ENST00000528253 ADGRL1O94910 1474 aa11.34□□□□□ -0.59
PTP4A2-210ENST00000528253 KDM4FA0A1W2PPD8 638 aa11.34□□□□□ -0.59
PTP4A2-210ENST00000528253 SCAPERQ9BY12 1400 aa11.34□□□□□ -0.59
PTP4A2-210ENST00000528253 PREX2Q70Z35 1606 aa11.33□□□□□ -0.6
PTP4A2-210ENST00000528253 VPS8Q8N3P4 1428 aa11.32□□□□□ -0.6
PTP4A2-210ENST00000528253 FRMPD1Q5SYB0 1578 aa11.32□□□□□ -0.6
PTP4A2-210ENST00000528253 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
PTP4A2-210ENST00000528253 ZNF777Q9ULD5 760 aaPredicted RBP11.3□□□□□ -0.6
PTP4A2-210ENST00000528253 EHBP1L1Q8N3D4 1523 aa11.3□□□□□ -0.6
PTP4A2-210ENST00000528253 CCNB3Q8WWL7 1395 aa11.29□□□□□ -0.6
PTP4A2-210ENST00000528253 VASPP50552 380 aaPredicted RBP11.29□□□□□ -0.6
PTP4A2-210ENST00000528253 MAGI2Q86UL8 1455 aa11.29□□□□□ -0.6
PTP4A2-210ENST00000528253 ARID4BQ4LE39 1312 aaPredicted RBP11.29□□□□□ -0.6
PTP4A2-210ENST00000528253 POGZQ7Z3K3 1410 aa11.28□□□□□ -0.6
PTP4A2-210ENST00000528253 ZNF518AQ6AHZ1 1483 aa11.28□□□□□ -0.6
PTP4A2-210ENST00000528253 CFDP1Q9UEE9 299 aaPredicted RBP11.28□□□□□ -0.6
PTP4A2-210ENST00000528253 SUPT6HQ7KZ85 1726 aaKnown RBP11.28□□□□□ -0.6
PTP4A2-210ENST00000528253 ZMYM4Q5VZL5 1548 aa11.28□□□□□ -0.6
PTP4A2-210ENST00000528253 GPATCH8Q9UKJ3 1502 aaKnown RBP11.28□□□□□ -0.6
PTP4A2-210ENST00000528253 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
PTP4A2-210ENST00000528253 ITSN2Q9NZM3 1697 aa11.27□□□□□ -0.6
PTP4A2-210ENST00000528253 AFAP1Q8N556 730 aa11.27□□□□□ -0.61
PTP4A2-210ENST00000528253 ZFYVE16Q7Z3T8 1539 aa11.26□□□□□ -0.61
PTP4A2-210ENST00000528253 ARHGEF40Q8TER5 1519 aa11.25□□□□□ -0.61
PTP4A2-210ENST00000528253 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
PTP4A2-210ENST00000528253 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
PTP4A2-210ENST00000528253 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
PTP4A2-210ENST00000528253 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
PTP4A2-210ENST00000528253 ABCC1P33527 1531 aa11.25□□□□□ -0.61
PTP4A2-210ENST00000528253 MAP3K1Q13233 1512 aa11.25□□□□□ -0.61
PTP4A2-210ENST00000528253 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
PTP4A2-210ENST00000528253 PLEKHH2Q8IVE3 1493 aa11.24□□□□□ -0.61
PTP4A2-210ENST00000528253 SAMD9LQ8IVG5 1584 aa11.24□□□□□ -0.61
PTP4A2-210ENST00000528253 BCORL1Q5H9F3 1711 aa11.23□□□□□ -0.61
PTP4A2-210ENST00000528253 HNRNPMP52272 730 aaKnown RBP eCLIP11.23□□□□□ -0.61
PTP4A2-210ENST00000528253 YEATS2Q9ULM3 1422 aa11.23□□□□□ -0.61
PTP4A2-210ENST00000528253 ATP10AO60312 1499 aa11.23□□□□□ -0.61
PTP4A2-210ENST00000528253 LRRC9Q6ZRR7 1453 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms