RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
VPS26B-204ENST00000527586 KIAA0556O60303 1618 aa12.83□□□□□ -0.36
VPS26B-204ENST00000527586 EFCAB5A4FU69 1503 aa12.82□□□□□ -0.36
VPS26B-204ENST00000527586 UGGT2Q9NYU1 1516 aa12.82□□□□□ -0.36
VPS26B-204ENST00000527586 ABCA8O94911 1581 aa12.8□□□□□ -0.36
VPS26B-204ENST00000527586 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
VPS26B-204ENST00000527586 RICTORQ6R327 1708 aa12.79□□□□□ -0.36
VPS26B-204ENST00000527586 KIF27Q86VH2 1401 aa12.79□□□□□ -0.36
VPS26B-204ENST00000527586 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
VPS26B-204ENST00000527586 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
VPS26B-204ENST00000527586 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
VPS26B-204ENST00000527586 SETD1AO15047 1707 aaKnown RBP12.76□□□□□ -0.37
VPS26B-204ENST00000527586 PKD2Q13563 968 aa12.76□□□□□ -0.37
VPS26B-204ENST00000527586 PPP6R1Q9UPN7 881 aa12.76□□□□□ -0.37
VPS26B-204ENST00000527586 ATP10AO60312 1499 aa12.75□□□□□ -0.37
VPS26B-204ENST00000527586 PTPRKQ15262 1439 aa12.75□□□□□ -0.37
VPS26B-204ENST00000527586 ATP10BO94823 1461 aa12.74□□□□□ -0.37
VPS26B-204ENST00000527586 C9orf84Q5VXU9 1444 aa12.74□□□□□ -0.37
VPS26B-204ENST00000527586 HECW1Q76N89 1606 aa12.71□□□□□ -0.37
VPS26B-204ENST00000527586 ESF1Q9H501 851 aaKnown RBP12.71□□□□□ -0.37
VPS26B-204ENST00000527586 ALKQ9UM73 1620 aa12.7□□□□□ -0.38
VPS26B-204ENST00000527586 CPS1P31327 1500 aa12.69□□□□□ -0.38
VPS26B-204ENST00000527586 C3P01024 1663 aa12.68□□□□□ -0.38
VPS26B-204ENST00000527586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
VPS26B-204ENST00000527586 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
VPS26B-204ENST00000527586 PLA2R1Q13018 1463 aa12.66□□□□□ -0.38
VPS26B-204ENST00000527586 TCOF1Q13428 1488 aaKnown RBP12.66□□□□□ -0.38
VPS26B-204ENST00000527586 SHANK2Q9UPX8 1470 aa12.65□□□□□ -0.38
VPS26B-204ENST00000527586 RAPGEF2Q9Y4G8 1499 aa12.65□□□□□ -0.38
VPS26B-204ENST00000527586 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
VPS26B-204ENST00000527586 SCAPERQ9BY12 1400 aa12.63□□□□□ -0.39
VPS26B-204ENST00000527586 FAM9AQ8IZU1 332 aaPredicted RBP12.63□□□□□ -0.39
VPS26B-204ENST00000527586 GOLGA3Q08378 1498 aa12.63□□□□□ -0.39
VPS26B-204ENST00000527586 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
VPS26B-204ENST00000527586 CFAP74Q9C0B2 1584 aa12.61□□□□□ -0.39
VPS26B-204ENST00000527586 NPATQ14207 1427 aa12.6□□□□□ -0.39
VPS26B-204ENST00000527586 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
VPS26B-204ENST00000527586 CNTLNQ9NXG0 1405 aa12.57□□□□□ -0.4
VPS26B-204ENST00000527586 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
VPS26B-204ENST00000527586 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
VPS26B-204ENST00000527586 RBM33Q96EV2 1170 aaKnown RBP12.54□□□□□ -0.4
VPS26B-204ENST00000527586 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
VPS26B-204ENST00000527586 ZMYM3Q14202 1370 aa12.53□□□□□ -0.4
VPS26B-204ENST00000527586 AGLP35573 1532 aa12.52□□□□□ -0.4
VPS26B-204ENST00000527586 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.51□□□□□ -0.41
VPS26B-204ENST00000527586 CEP170BQ9Y4F5 1589 aaPredicted RBP12.51□□□□□ -0.41
VPS26B-204ENST00000527586 AFAP1Q8N556 730 aa12.5□□□□□ -0.41
VPS26B-204ENST00000527586 LRRC7Q96NW7 1537 aa12.5□□□□□ -0.41
VPS26B-204ENST00000527586 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
VPS26B-204ENST00000527586 ZNF142P52746 1687 aaPredicted RBP12.48□□□□□ -0.41
VPS26B-204ENST00000527586 FOXD1Q16676 465 aa12.48□□□□□ -0.41
VPS26B-204ENST00000527586 ZNF772Q68DY9 489 aaPredicted RBP12.48□□□□□ -0.41
VPS26B-204ENST00000527586 MYO3AQ8NEV4 1616 aa12.48□□□□□ -0.41
VPS26B-204ENST00000527586 RXRBP28702 533 aa12.47□□□□□ -0.41
VPS26B-204ENST00000527586 SUPT6HQ7KZ85 1726 aaKnown RBP12.47□□□□□ -0.41
VPS26B-204ENST00000527586 RNF17Q9BXT8 1623 aaKnown RBP12.47□□□□□ -0.41
VPS26B-204ENST00000527586 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
VPS26B-204ENST00000527586 DIP2CQ9Y2E4 1556 aa12.47□□□□□ -0.41
VPS26B-204ENST00000527586 SETBP1Q9Y6X0 1596 aa12.47□□□□□ -0.41
VPS26B-204ENST00000527586 PLCH2O75038 1416 aa12.45□□□□□ -0.42
VPS26B-204ENST00000527586 NEURL4Q96JN8 1562 aa12.45□□□□□ -0.42
VPS26B-204ENST00000527586 ZNF518AQ6AHZ1 1483 aa12.45□□□□□ -0.42
VPS26B-204ENST00000527586 FAM135BQ49AJ0 1406 aa12.45□□□□□ -0.42
VPS26B-204ENST00000527586 EFCAB2Q5VUJ9 269 aa12.44□□□□□ -0.42
VPS26B-204ENST00000527586 ANKLE2Q86XL3 938 aa12.43□□□□□ -0.42
VPS26B-204ENST00000527586 A2ML1A8K2U0 1454 aa12.42□□□□□ -0.42
VPS26B-204ENST00000527586 NUP153P49790 1475 aaKnown RBP12.41□□□□□ -0.42
VPS26B-204ENST00000527586 RAPGEF6Q8TEU7 1601 aa12.41□□□□□ -0.42
VPS26B-204ENST00000527586 MEX3CQ5U5Q3 659 aaKnown RBP12.41□□□□□ -0.42
VPS26B-204ENST00000527586 MROH2AA6NES4 1674 aa12.4□□□□□ -0.42
VPS26B-204ENST00000527586 DNMT1P26358 1616 aaKnown RBP12.4□□□□□ -0.42
VPS26B-204ENST00000527586 KDM5CP41229 1560 aa12.39□□□□□ -0.43
VPS26B-204ENST00000527586 NPHP4O75161 1426 aaPredicted RBP12.39□□□□□ -0.43
VPS26B-204ENST00000527586 ABCA6Q8N139 1617 aa12.39□□□□□ -0.43
VPS26B-204ENST00000527586 CDK12Q9NYV4 1490 aaPredicted RBP12.39□□□□□ -0.43
VPS26B-204ENST00000527586 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
VPS26B-204ENST00000527586 POLR1AO95602 1720 aaPredicted RBP12.37□□□□□ -0.43
VPS26B-204ENST00000527586 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.37□□□□□ -0.43
VPS26B-204ENST00000527586 JCADQ9P266 1359 aa12.37□□□□□ -0.43
VPS26B-204ENST00000527586 MLH3Q9UHC1 1453 aa12.37□□□□□ -0.43
VPS26B-204ENST00000527586 NUTM2BA6NNL0 878 aaPredicted RBP12.36□□□□□ -0.43
VPS26B-204ENST00000527586 NUTM2EB1AL46 878 aaPredicted RBP12.36□□□□□ -0.43
VPS26B-204ENST00000527586 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
VPS26B-204ENST00000527586 NUTM2AQ8IVF1 878 aaPredicted RBP12.36□□□□□ -0.43
VPS26B-204ENST00000527586 SYNMO15061 1565 aa12.35□□□□□ -0.43
VPS26B-204ENST00000527586 STRCP1A6NGW2 1772 aa12.34□□□□□ -0.43
VPS26B-204ENST00000527586 MED14O60244 1454 aa12.34□□□□□ -0.43
VPS26B-204ENST00000527586 LRP6O75581 1613 aa12.33□□□□□ -0.44
VPS26B-204ENST00000527586 YY1P25490 414 aa12.32□□□□□ -0.44
VPS26B-204ENST00000527586 CDK13Q14004 1512 aaKnown RBP12.32□□□□□ -0.44
VPS26B-204ENST00000527586 THEMISQ8N1K5 641 aaPredicted RBP12.31□□□□□ -0.44
VPS26B-204ENST00000527586 RGS12O14924 1447 aa12.3□□□□□ -0.44
VPS26B-204ENST00000527586 CLTCQ00610 1675 aaKnown RBP12.3□□□□□ -0.44
VPS26B-204ENST00000527586 SUPT5HO00267 1087 aaKnown RBP12.3□□□□□ -0.44
VPS26B-204ENST00000527586 SPATA31A6Q5VVP1 1343 aa12.3□□□□□ -0.44
VPS26B-204ENST00000527586 ABCC1P33527 1531 aa12.29□□□□□ -0.44
VPS26B-204ENST00000527586 GGT6Q6P531 493 aa12.28□□□□□ -0.44
VPS26B-204ENST00000527586 ROBO1Q9Y6N7 1651 aa12.28□□□□□ -0.44
VPS26B-204ENST00000527586 ATAD2Q6PL18 1390 aa12.28□□□□□ -0.44
VPS26B-204ENST00000527586 TNRQ92752 1358 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms