RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 NISCHQ9Y2I1 1504 aa18.66■□□□□ 0.58
VPS26B-204ENST00000527586 ABCC9O60706 1549 aa18.44■□□□□ 0.54
VPS26B-204ENST00000527586 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
VPS26B-204ENST00000527586 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
VPS26B-204ENST00000527586 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
VPS26B-204ENST00000527586 PABPN1Q86U42 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
VPS26B-204ENST00000527586 RB1CC1Q8TDY2 1594 aa16.95■□□□□ 0.3
VPS26B-204ENST00000527586 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
VPS26B-204ENST00000527586 NACADO15069 1562 aa16.55■□□□□ 0.24
VPS26B-204ENST00000527586 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.24
VPS26B-204ENST00000527586 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
VPS26B-204ENST00000527586 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
VPS26B-204ENST00000527586 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
VPS26B-204ENST00000527586 DCAF8L2P0C7V8 631 aa16.42■□□□□ 0.22
VPS26B-204ENST00000527586 CUX2O14529 1486 aa16.33■□□□□ 0.2
VPS26B-204ENST00000527586 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.18
VPS26B-204ENST00000527586 SHROOM4Q9ULL8 1493 aa16.13■□□□□ 0.17
VPS26B-204ENST00000527586 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
VPS26B-204ENST00000527586 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
VPS26B-204ENST00000527586 AEBP2Q6ZN18 517 aaPredicted RBP15.86■□□□□ 0.13
VPS26B-204ENST00000527586 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
VPS26B-204ENST00000527586 NESP48681 1621 aa15.5■□□□□ 0.07
VPS26B-204ENST00000527586 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
VPS26B-204ENST00000527586 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
VPS26B-204ENST00000527586 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
VPS26B-204ENST00000527586 ILDR1Q86SU0 546 aaPredicted RBP15.42■□□□□ 0.06
VPS26B-204ENST00000527586 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
VPS26B-204ENST00000527586 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
VPS26B-204ENST00000527586 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
VPS26B-204ENST00000527586 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
VPS26B-204ENST00000527586 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
VPS26B-204ENST00000527586 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
VPS26B-204ENST00000527586 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
VPS26B-204ENST00000527586 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
VPS26B-204ENST00000527586 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
VPS26B-204ENST00000527586 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
VPS26B-204ENST00000527586 PDS5BQ9NTI5 1447 aa15.16■□□□□ 0.02
VPS26B-204ENST00000527586 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
VPS26B-204ENST00000527586 KIF21AQ7Z4S6 1674 aa15.14■□□□□ 0.01
VPS26B-204ENST00000527586 LAMC3Q9Y6N6 1575 aa15.12■□□□□ 0.01
VPS26B-204ENST00000527586 MRC2Q9UBG0 1479 aa15.08■□□□□ 0
VPS26B-204ENST00000527586 HMGXB3Q12766 1538 aa15.06■□□□□ 0
VPS26B-204ENST00000527586 WDR62O43379 1518 aa15.03■□□□□ -0
VPS26B-204ENST00000527586 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
VPS26B-204ENST00000527586 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
VPS26B-204ENST00000527586 CADPSQ9ULU8 1353 aa14.85□□□□□ -0.03
VPS26B-204ENST00000527586 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
VPS26B-204ENST00000527586 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
VPS26B-204ENST00000527586 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
VPS26B-204ENST00000527586 FANCD2Q9BXW9 1451 aa14.67□□□□□ -0.06
VPS26B-204ENST00000527586 KDM4FA0A1W2PPD8 638 aa14.66□□□□□ -0.06
VPS26B-204ENST00000527586 ZNF608Q9ULD9 1512 aaPredicted RBP14.65□□□□□ -0.06
VPS26B-204ENST00000527586 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
VPS26B-204ENST00000527586 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
VPS26B-204ENST00000527586 FBLN2P98095 1184 aa14.59□□□□□ -0.07
VPS26B-204ENST00000527586 FBXO41Q8TF61 875 aa14.56□□□□□ -0.08
VPS26B-204ENST00000527586 IFT140Q96RY7 1462 aa14.53□□□□□ -0.08
VPS26B-204ENST00000527586 LMTK3Q96Q04 1460 aa14.52□□□□□ -0.08
VPS26B-204ENST00000527586 CHD1O14646 1710 aa14.49□□□□□ -0.09
VPS26B-204ENST00000527586 SOCS7O14512 581 aa14.48□□□□□ -0.09
VPS26B-204ENST00000527586 EIF4G3O43432 1585 aaKnown RBP14.43□□□□□ -0.1
VPS26B-204ENST00000527586 ERCC6L2Q5T890 1561 aa14.43□□□□□ -0.1
VPS26B-204ENST00000527586 CFTRP13569 1480 aa14.4□□□□□ -0.1
VPS26B-204ENST00000527586 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.112e-9■■■■■ 39.4
VPS26B-204ENST00000527586 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
VPS26B-204ENST00000527586 ILDR2Q71H61 639 aa14.38□□□□□ -0.11
VPS26B-204ENST00000527586 GAPVD1Q14C86 1478 aa14.37□□□□□ -0.11
VPS26B-204ENST00000527586 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
VPS26B-204ENST00000527586 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
VPS26B-204ENST00000527586 CHMP7Q8WUX9 453 aaPredicted RBP14.26□□□□□ -0.13
VPS26B-204ENST00000527586 SYNJ1O43426 1573 aa14.25□□□□□ -0.13
VPS26B-204ENST00000527586 TOPBP1Q92547 1522 aa14.24□□□□□ -0.13
VPS26B-204ENST00000527586 SYNJ2O15056 1496 aa14.24□□□□□ -0.13
VPS26B-204ENST00000527586 DISP3Q9P2K9 1392 aa14.22□□□□□ -0.13
VPS26B-204ENST00000527586 FAM69CQ0P6D2 419 aa14.22□□□□□ -0.13
VPS26B-204ENST00000527586 KIF13AQ9H1H9 1805 aa14.22□□□□□ -0.13
VPS26B-204ENST00000527586 ADGRL1O94910 1474 aa14.19□□□□□ -0.14
VPS26B-204ENST00000527586 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
VPS26B-204ENST00000527586 KDM6BO15054 1643 aa14.16□□□□□ -0.14
VPS26B-204ENST00000527586 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
VPS26B-204ENST00000527586 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
VPS26B-204ENST00000527586 ABCC8Q09428 1581 aa14.11□□□□□ -0.15
VPS26B-204ENST00000527586 WIZO95785 1651 aa14.1□□□□□ -0.15
VPS26B-204ENST00000527586 ABCC10Q5T3U5 1492 aa14.1□□□□□ -0.15
VPS26B-204ENST00000527586 MAGI1Q96QZ7 1491 aaPredicted RBP14.06□□□□□ -0.16
VPS26B-204ENST00000527586 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
VPS26B-204ENST00000527586 RAD54L2Q9Y4B4 1467 aa14.04□□□□□ -0.16
VPS26B-204ENST00000527586 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
VPS26B-204ENST00000527586 SOGA1O94964 1423 aa13.98□□□□□ -0.17
VPS26B-204ENST00000527586 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
VPS26B-204ENST00000527586 DIP2BQ9P265 1576 aa13.97□□□□□ -0.17
VPS26B-204ENST00000527586 PRDM2Q13029 1718 aa13.97□□□□□ -0.17
VPS26B-204ENST00000527586 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
VPS26B-204ENST00000527586 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
VPS26B-204ENST00000527586 MAPKBP1O60336 1514 aa13.9□□□□□ -0.18
VPS26B-204ENST00000527586 TSPOAP1O95153 1857 aa13.9□□□□□ -0.18
VPS26B-204ENST00000527586 WDR97A6NE52 1622 aa13.89□□□□□ -0.19
VPS26B-204ENST00000527586 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
VPS26B-204ENST00000527586 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
VPS26B-204ENST00000527586 CERKQ8TCT0 537 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms