RNA–Protein interactions for RNA: ENST00000527584.5

PUF60-210, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-210ENST00000527584 RGS17Q9UGC6 210 aaPredicted RBP15.24■□□□□ 0.03
PUF60-210ENST00000527584 HECW1Q76N89 1606 aa15.16■□□□□ 0.02
PUF60-210ENST00000527584 ATP10AO60312 1499 aa15.15■□□□□ 0.02
PUF60-210ENST00000527584 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
PUF60-210ENST00000527584 GOLGA3Q08378 1498 aa15.14■□□□□ 0.01
PUF60-210ENST00000527584 C3P01024 1663 aa15.14■□□□□ 0.01
PUF60-210ENST00000527584 TOM1O60784 492 aa15.14■□□□□ 0.01
PUF60-210ENST00000527584 TRAPPC8Q9Y2L5 1435 aa15.14■□□□□ 0.01
PUF60-210ENST00000527584 CAMSAP1Q5T5Y3 1602 aa15.14■□□□□ 0.01
PUF60-210ENST00000527584 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
PUF60-210ENST00000527584 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
PUF60-210ENST00000527584 SRCAPQ6ZRS2 3230 aa15.13■□□□□ 0.01
PUF60-210ENST00000527584 ARID3CA6NKF2 412 aa15.12■□□□□ 0.01
PUF60-210ENST00000527584 RAPGEF2Q9Y4G8 1499 aa15.11■□□□□ 0.01
PUF60-210ENST00000527584 NCKAP5LQ9HCH0 1330 aa15.11■□□□□ 0.01
PUF60-210ENST00000527584 CFAP74Q9C0B2 1584 aa15.11■□□□□ 0.01
PUF60-210ENST00000527584 ALKQ9UM73 1620 aa15.09■□□□□ 0.01
PUF60-210ENST00000527584 PKD2Q13563 968 aa15.05■□□□□ -0
PUF60-210ENST00000527584 POTEAQ6S8J7 498 aa15.05■□□□□ -0
PUF60-210ENST00000527584 TCOF1Q13428 1488 aaKnown RBP15.04■□□□□ -0
PUF60-210ENST00000527584 PLA2R1Q13018 1463 aa15.03■□□□□ -0
PUF60-210ENST00000527584 CTTNBP2Q8WZ74 1663 aa15.02□□□□□ -0.01
PUF60-210ENST00000527584 CPS1P31327 1500 aa15.01□□□□□ -0.01
PUF60-210ENST00000527584 SCAPERQ9BY12 1400 aa15□□□□□ -0.01
PUF60-210ENST00000527584 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15□□□□□ -0.01
PUF60-210ENST00000527584 PTPRKQ15262 1439 aa15□□□□□ -0.01
PUF60-210ENST00000527584 NPATQ14207 1427 aa14.99□□□□□ -0.01
PUF60-210ENST00000527584 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
PUF60-210ENST00000527584 REREQ9P2R6 1566 aa14.98□□□□□ -0.01
PUF60-210ENST00000527584 AGLP35573 1532 aa14.97□□□□□ -0.01
PUF60-210ENST00000527584 SETD1AO15047 1707 aaKnown RBP14.97□□□□□ -0.01
PUF60-210ENST00000527584 FAM9AQ8IZU1 332 aaPredicted RBP14.94□□□□□ -0.02
PUF60-210ENST00000527584 UPF1Q92900 1129 aaKnown RBP eCLIP14.94□□□□□ -0.02
PUF60-210ENST00000527584 RAPGEF6Q8TEU7 1601 aa14.94□□□□□ -0.02
PUF60-210ENST00000527584 SHANK2Q9UPX8 1470 aa14.94□□□□□ -0.02
PUF60-210ENST00000527584 ZNF142P52746 1687 aaPredicted RBP14.93□□□□□ -0.02
PUF60-210ENST00000527584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
PUF60-210ENST00000527584 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
PUF60-210ENST00000527584 CNTLNQ9NXG0 1405 aa14.92□□□□□ -0.02
PUF60-210ENST00000527584 NUP153P49790 1475 aaKnown RBP14.91□□□□□ -0.02
PUF60-210ENST00000527584 PLEKHD1A6NEE1 506 aa14.91□□□□□ -0.02
PUF60-210ENST00000527584 PLCH2O75038 1416 aa14.91□□□□□ -0.02
PUF60-210ENST00000527584 DIP2CQ9Y2E4 1556 aa14.9□□□□□ -0.02
PUF60-210ENST00000527584 KDM5CP41229 1560 aa14.9□□□□□ -0.02
PUF60-210ENST00000527584 ESF1Q9H501 851 aaKnown RBP14.89□□□□□ -0.03
PUF60-210ENST00000527584 SUPT6HQ7KZ85 1726 aaKnown RBP14.89□□□□□ -0.03
PUF60-210ENST00000527584 MROH2AA6NES4 1674 aa14.88□□□□□ -0.03
PUF60-210ENST00000527584 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
PUF60-210ENST00000527584 P3H3Q8IVL6 736 aa14.87□□□□□ -0.03
PUF60-210ENST00000527584 MYO3AQ8NEV4 1616 aa14.87□□□□□ -0.03
PUF60-210ENST00000527584 ZMYM3Q14202 1370 aa14.86□□□□□ -0.03
PUF60-210ENST00000527584 ZNF518AQ6AHZ1 1483 aa14.86□□□□□ -0.03
PUF60-210ENST00000527584 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
PUF60-210ENST00000527584 VWDEQ8N2E2 1590 aa14.85□□□□□ -0.03
PUF60-210ENST00000527584 AFAP1Q8N556 730 aa14.84□□□□□ -0.03
PUF60-210ENST00000527584 NEURL4Q96JN8 1562 aa14.83□□□□□ -0.04
PUF60-210ENST00000527584 ABCA6Q8N139 1617 aa14.83□□□□□ -0.04
PUF60-210ENST00000527584 MLH3Q9UHC1 1453 aa14.82□□□□□ -0.04
PUF60-210ENST00000527584 SUPT5HO00267 1087 aaKnown RBP14.8□□□□□ -0.04
PUF60-210ENST00000527584 EFCAB2Q5VUJ9 269 aa14.8□□□□□ -0.04
PUF60-210ENST00000527584 SAMD9Q5K651 1589 aa14.8□□□□□ -0.04
PUF60-210ENST00000527584 POLR1AO95602 1720 aaPredicted RBP14.79□□□□□ -0.04
PUF60-210ENST00000527584 DNMT1P26358 1616 aaKnown RBP14.77□□□□□ -0.04
PUF60-210ENST00000527584 RNF17Q9BXT8 1623 aaKnown RBP14.77□□□□□ -0.04
PUF60-210ENST00000527584 LRRC7Q96NW7 1537 aa14.76□□□□□ -0.05
PUF60-210ENST00000527584 STRCP1A6NGW2 1772 aa14.75□□□□□ -0.05
PUF60-210ENST00000527584 A2ML1A8K2U0 1454 aa14.75□□□□□ -0.05
PUF60-210ENST00000527584 MYO5CQ9NQX4 1742 aa14.72□□□□□ -0.05
PUF60-210ENST00000527584 PRXQ9BXM0 1461 aa14.72□□□□□ -0.05
PUF60-210ENST00000527584 MYT1LQ9UL68 1186 aa14.71□□□□□ -0.05
PUF60-210ENST00000527584 MED14O60244 1454 aa14.7□□□□□ -0.06
PUF60-210ENST00000527584 FAM135BQ49AJ0 1406 aa14.7□□□□□ -0.06
PUF60-210ENST00000527584 CLTCQ00610 1675 aaKnown RBP14.7□□□□□ -0.06
PUF60-210ENST00000527584 KIDINS220Q9ULH0 1771 aa14.69□□□□□ -0.06
PUF60-210ENST00000527584 SYNMO15061 1565 aa14.68□□□□□ -0.06
PUF60-210ENST00000527584 ANKLE2Q86XL3 938 aa14.66□□□□□ -0.06
PUF60-210ENST00000527584 DEPDC5O75140 1603 aa14.65□□□□□ -0.06
PUF60-210ENST00000527584 NPHP4O75161 1426 aaPredicted RBP14.65□□□□□ -0.06
PUF60-210ENST00000527584 TRIM52Q96A61 297 aa14.63□□□□□ -0.07
PUF60-210ENST00000527584 XIRP1Q702N8 1843 aaKnown RBP14.62□□□□□ -0.07
PUF60-210ENST00000527584 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
PUF60-210ENST00000527584 CDK13Q14004 1512 aaKnown RBP14.61□□□□□ -0.07
PUF60-210ENST00000527584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.6□□□□□ -0.079e-7■■□□□ 13.7
PUF60-210ENST00000527584 CDK12Q9NYV4 1490 aaPredicted RBP14.6□□□□□ -0.07
PUF60-210ENST00000527584 IQGAP1P46940 1657 aa14.6□□□□□ -0.07
PUF60-210ENST00000527584 ZNF772Q68DY9 489 aaPredicted RBP14.59□□□□□ -0.07
PUF60-210ENST00000527584 ABCC1P33527 1531 aa14.58□□□□□ -0.08
PUF60-210ENST00000527584 KIF14Q15058 1648 aa14.57□□□□□ -0.08
PUF60-210ENST00000527584 CDC42BPBQ9Y5S2 1711 aa14.57□□□□□ -0.08
PUF60-210ENST00000527584 SETBP1Q9Y6X0 1596 aa14.56□□□□□ -0.08
PUF60-210ENST00000527584 ITSN2Q9NZM3 1697 aa14.56□□□□□ -0.08
PUF60-210ENST00000527584 THEMISQ8N1K5 641 aaPredicted RBP14.56□□□□□ -0.08
PUF60-210ENST00000527584 PLXNC1O60486 1568 aa14.56□□□□□ -0.08
PUF60-210ENST00000527584 ROBO1Q9Y6N7 1651 aa14.55□□□□□ -0.08
PUF60-210ENST00000527584 RXRBP28702 533 aa14.55□□□□□ -0.08
PUF60-210ENST00000527584 JCADQ9P266 1359 aa14.54□□□□□ -0.08
PUF60-210ENST00000527584 TNRQ92752 1358 aa14.53□□□□□ -0.08
PUF60-210ENST00000527584 LRP6O75581 1613 aa14.52□□□□□ -0.08
PUF60-210ENST00000527584 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
PUF60-210ENST00000527584 ZC3H13Q5T200 1668 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms