RNA–Protein interactions for RNA: ENST00000526761.5

CLNS1A-206, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-206ENST00000526761 TIAM1Q13009 1591 aa12□□□□□ -0.49
CLNS1A-206ENST00000526761 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
CLNS1A-206ENST00000526761 WDR7Q9Y4E6 1490 aa11.97□□□□□ -0.49
CLNS1A-206ENST00000526761 RBM42Q9BTD8 480 aaKnown RBP11.96□□□□□ -0.49
CLNS1A-206ENST00000526761 MAPKBP1O60336 1514 aa11.96□□□□□ -0.5
CLNS1A-206ENST00000526761 KCNA4P22459 653 aa11.95□□□□□ -0.5
CLNS1A-206ENST00000526761 ABCB7O75027 752 aa11.94□□□□□ -0.5
CLNS1A-206ENST00000526761 PHLDB1Q86UU1 1377 aa11.93□□□□□ -0.5
CLNS1A-206ENST00000526761 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
CLNS1A-206ENST00000526761 ABCC10Q5T3U5 1492 aa11.93□□□□□ -0.5
CLNS1A-206ENST00000526761 CFAP43Q8NDM7 1665 aa11.92□□□□□ -0.5
CLNS1A-206ENST00000526761 ZNF777Q9ULD5 760 aaPredicted RBP11.92□□□□□ -0.5
CLNS1A-206ENST00000526761 CCNB3Q8WWL7 1395 aa11.92□□□□□ -0.5
CLNS1A-206ENST00000526761 ZNF644Q9H582 1327 aaPredicted RBP11.91□□□□□ -0.5
CLNS1A-206ENST00000526761 KIF14Q15058 1648 aa11.91□□□□□ -0.5
CLNS1A-206ENST00000526761 CFDP1Q9UEE9 299 aaPredicted RBP11.91□□□□□ -0.5
CLNS1A-206ENST00000526761 CD109Q6YHK3 1445 aa11.91□□□□□ -0.5
CLNS1A-206ENST00000526761 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
CLNS1A-206ENST00000526761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLNS1A-206ENST00000526761 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
CLNS1A-206ENST00000526761 GPATCH8Q9UKJ3 1502 aaKnown RBP11.89□□□□□ -0.51
CLNS1A-206ENST00000526761 PLCH2O75038 1416 aa11.88□□□□□ -0.51
CLNS1A-206ENST00000526761 HNRNPMP52272 730 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLNS1A-206ENST00000526761 FAM50AQ14320 339 aaKnown RBP11.86□□□□□ -0.51
CLNS1A-206ENST00000526761 SUPT6HQ7KZ85 1726 aaKnown RBP11.86□□□□□ -0.51
CLNS1A-206ENST00000526761 GLI2P10070 1586 aa11.85□□□□□ -0.51
CLNS1A-206ENST00000526761 TTC37Q6PGP7 1564 aa11.85□□□□□ -0.51
CLNS1A-206ENST00000526761 DIP2BQ9P265 1576 aa11.85□□□□□ -0.51
CLNS1A-206ENST00000526761 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
CLNS1A-206ENST00000526761 MYOM3Q5VTT5 1437 aa11.85□□□□□ -0.51
CLNS1A-206ENST00000526761 ABCA9Q8IUA7 1624 aa11.84□□□□□ -0.51
CLNS1A-206ENST00000526761 KIF13AQ9H1H9 1805 aa11.82□□□□□ -0.52
CLNS1A-206ENST00000526761 ITGAEP38570 1179 aa11.82□□□□□ -0.52
CLNS1A-206ENST00000526761 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
CLNS1A-206ENST00000526761 FGD6Q6ZV73 1430 aa11.81□□□□□ -0.52
CLNS1A-206ENST00000526761 AFAP1Q8N556 730 aa11.81□□□□□ -0.52
CLNS1A-206ENST00000526761 TSPOAP1O95153 1857 aa11.8□□□□□ -0.52
CLNS1A-206ENST00000526761 AKNAQ7Z591 1439 aa11.8□□□□□ -0.52
CLNS1A-206ENST00000526761 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
CLNS1A-206ENST00000526761 RAPGEF3O95398 923 aa11.8□□□□□ -0.52
CLNS1A-206ENST00000526761 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
CLNS1A-206ENST00000526761 CHRDL2Q6WN34 429 aa11.8□□□□□ -0.52
CLNS1A-206ENST00000526761 ARHGAP5Q13017 1502 aa11.8□□□□□ -0.52
CLNS1A-206ENST00000526761 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
CLNS1A-206ENST00000526761 CDC42BPBQ9Y5S2 1711 aa11.8□□□□□ -0.52
CLNS1A-206ENST00000526761 MAP3K4Q9Y6R4 1608 aa11.79□□□□□ -0.52
CLNS1A-206ENST00000526761 FANCAO15360 1455 aa11.79□□□□□ -0.52
CLNS1A-206ENST00000526761 SCAPERQ9BY12 1400 aa11.78□□□□□ -0.52
CLNS1A-206ENST00000526761 RRBP1Q9P2E9 1410 aaKnown RBP11.78□□□□□ -0.52
CLNS1A-206ENST00000526761 ARHGEF12Q9NZN5 1544 aa11.78□□□□□ -0.52
CLNS1A-206ENST00000526761 CHIC2Q9UKJ5 165 aa11.78□□□□□ -0.52
CLNS1A-206ENST00000526761 COL17A1Q9UMD9 1497 aaPredicted RBP11.76□□□□□ -0.53
CLNS1A-206ENST00000526761 RSPH4AQ5TD94 716 aa11.76□□□□□ -0.53
CLNS1A-206ENST00000526761 TRAPPC8Q9Y2L5 1435 aa11.76□□□□□ -0.53
CLNS1A-206ENST00000526761 MBD5Q9P267 1494 aa11.76□□□□□ -0.53
CLNS1A-206ENST00000526761 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
CLNS1A-206ENST00000526761 MYO5CQ9NQX4 1742 aa11.75□□□□□ -0.53
CLNS1A-206ENST00000526761 TSPY4P0CV99 314 aa11.75□□□□□ -0.53
CLNS1A-206ENST00000526761 TSPY10P0CW01 314 aa11.75□□□□□ -0.53
CLNS1A-206ENST00000526761 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
CLNS1A-206ENST00000526761 KIAA1107Q9UPP5 1409 aa11.75□□□□□ -0.53
CLNS1A-206ENST00000526761 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
CLNS1A-206ENST00000526761 ARAP3Q8WWN8 1544 aa11.75□□□□□ -0.53
CLNS1A-206ENST00000526761 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
CLNS1A-206ENST00000526761 PTPN23Q9H3S7 1636 aa11.75□□□□□ -0.53
CLNS1A-206ENST00000526761 PCGF6Q9BYE7 350 aa11.74□□□□□ -0.53
CLNS1A-206ENST00000526761 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLNS1A-206ENST00000526761 ABCC5O15440 1437 aa11.74□□□□□ -0.53
CLNS1A-206ENST00000526761 CAMSAP2Q08AD1 1489 aa11.74□□□□□ -0.53
CLNS1A-206ENST00000526761 NEO1Q92859 1461 aa11.74□□□□□ -0.53
CLNS1A-206ENST00000526761 SAMD9LQ8IVG5 1584 aa11.74□□□□□ -0.53
CLNS1A-206ENST00000526761 ADGRL1O94910 1474 aa11.73□□□□□ -0.53
CLNS1A-206ENST00000526761 TEX14Q8IWB6 1497 aa11.73□□□□□ -0.53
CLNS1A-206ENST00000526761 RRP7BPQ9NSQ0 103 aa11.72□□□□□ -0.53
CLNS1A-206ENST00000526761 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
CLNS1A-206ENST00000526761 ITSN2Q9NZM3 1697 aa11.71□□□□□ -0.54
CLNS1A-206ENST00000526761 DENND4BO75064 1496 aaPredicted RBP11.7□□□□□ -0.54
CLNS1A-206ENST00000526761 PLEKHH2Q8IVE3 1493 aa11.7□□□□□ -0.54
CLNS1A-206ENST00000526761 SPAG9O60271 1321 aaKnown RBP11.7□□□□□ -0.54
CLNS1A-206ENST00000526761 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
CLNS1A-206ENST00000526761 DAPK1P53355 1430 aa11.69□□□□□ -0.54
CLNS1A-206ENST00000526761 ABCC1P33527 1531 aa11.68□□□□□ -0.54
CLNS1A-206ENST00000526761 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
CLNS1A-206ENST00000526761 POGZQ7Z3K3 1410 aa11.66□□□□□ -0.54
CLNS1A-206ENST00000526761 CCDC141Q6ZP82 1450 aa11.65□□□□□ -0.54
CLNS1A-206ENST00000526761 NCOA1Q15788 1441 aa11.64□□□□□ -0.55
CLNS1A-206ENST00000526761 C9orf84Q5VXU9 1444 aa11.64□□□□□ -0.55
CLNS1A-206ENST00000526761 ZNF518AQ6AHZ1 1483 aa11.63□□□□□ -0.55
CLNS1A-206ENST00000526761 ARHGEF5Q12774 1597 aa11.63□□□□□ -0.55
CLNS1A-206ENST00000526761 CFAP74Q9C0B2 1584 aa11.63□□□□□ -0.55
CLNS1A-206ENST00000526761 DNMT1P26358 1616 aaKnown RBP11.63□□□□□ -0.55
CLNS1A-206ENST00000526761 RTEL1-TNFRSF6BF6WH68 1400 aa11.62□□□□□ -0.55
CLNS1A-206ENST00000526761 YEATS2Q9ULM3 1422 aa11.62□□□□□ -0.55
CLNS1A-206ENST00000526761 ANKRD30AQ9BXX3 1397 aa11.62□□□□□ -0.55
CLNS1A-206ENST00000526761 MLH3Q9UHC1 1453 aa11.61□□□□□ -0.55
CLNS1A-206ENST00000526761 FRMPD1Q5SYB0 1578 aa11.6□□□□□ -0.55
CLNS1A-206ENST00000526761 ROCK1Q13464 1354 aa11.6□□□□□ -0.55
CLNS1A-206ENST00000526761 HRCP23327 699 aa11.6□□□□□ -0.55
CLNS1A-206ENST00000526761 RICTORQ6R327 1708 aa11.6□□□□□ -0.55
CLNS1A-206ENST00000526761 DHX29Q7Z478 1369 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms