RNA–Protein interactions for RNA: ENST00000526761.5

CLNS1A-206, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-206ENST00000526761 AEBP2Q6ZN18 517 aaPredicted RBP20.66■□□□□ 0.9
CLNS1A-206ENST00000526761 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
CLNS1A-206ENST00000526761 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
CLNS1A-206ENST00000526761 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
CLNS1A-206ENST00000526761 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
CLNS1A-206ENST00000526761 FOXD1Q16676 465 aa16.6■□□□□ 0.25
CLNS1A-206ENST00000526761 POTEDQ86YR6 584 aa16.28■□□□□ 0.2
CLNS1A-206ENST00000526761 MSH5O43196 834 aa15.88■□□□□ 0.13
CLNS1A-206ENST00000526761 CCDC180Q9P1Z9 1646 aa15.83■□□□□ 0.13
CLNS1A-206ENST00000526761 ABCC9O60706 1549 aa15.46■□□□□ 0.07
CLNS1A-206ENST00000526761 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
CLNS1A-206ENST00000526761 DCAF8L2P0C7V8 631 aa15.28■□□□□ 0.04
CLNS1A-206ENST00000526761 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
CLNS1A-206ENST00000526761 ZCCHC6Q5VYS8 1495 aaKnown RBP15.12■□□□□ 0.01
CLNS1A-206ENST00000526761 PPP6R1Q9UPN7 881 aa15.05■□□□□ -0
CLNS1A-206ENST00000526761 ADRA2BP18089 450 aa14.99□□□□□ -0.01
CLNS1A-206ENST00000526761 DCAF1Q9Y4B6 1507 aa14.94□□□□□ -0.02
CLNS1A-206ENST00000526761 NACADO15069 1562 aa14.91□□□□□ -0.02
CLNS1A-206ENST00000526761 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
CLNS1A-206ENST00000526761 RB1CC1Q8TDY2 1594 aa14.85□□□□□ -0.03
CLNS1A-206ENST00000526761 SHROOM4Q9ULL8 1493 aa14.67□□□□□ -0.06
CLNS1A-206ENST00000526761 PABPN1Q86U42 306 aaKnown RBP eCLIP14.62□□□□□ -0.07
CLNS1A-206ENST00000526761 SCRIBQ14160 1630 aa14.6□□□□□ -0.07
CLNS1A-206ENST00000526761 UNC13AQ9UPW8 1703 aa14.51□□□□□ -0.09
CLNS1A-206ENST00000526761 BICRAQ9NZM4 1560 aa14.46□□□□□ -0.09
CLNS1A-206ENST00000526761 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
CLNS1A-206ENST00000526761 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
CLNS1A-206ENST00000526761 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
CLNS1A-206ENST00000526761 EIF4G1Q04637 1599 aaKnown RBP14.03□□□□□ -0.16
CLNS1A-206ENST00000526761 MROH2BQ7Z745 1585 aa14.03□□□□□ -0.16
CLNS1A-206ENST00000526761 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
CLNS1A-206ENST00000526761 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
CLNS1A-206ENST00000526761 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
CLNS1A-206ENST00000526761 SMARCA4P51532 1647 aa13.96□□□□□ -0.17
CLNS1A-206ENST00000526761 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
CLNS1A-206ENST00000526761 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
CLNS1A-206ENST00000526761 ATAD2BQ9ULI0 1458 aa13.9□□□□□ -0.18
CLNS1A-206ENST00000526761 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
CLNS1A-206ENST00000526761 CACNB1Q02641 598 aaPredicted RBP13.88□□□□□ -0.19
CLNS1A-206ENST00000526761 WIZO95785 1651 aa13.86□□□□□ -0.19
CLNS1A-206ENST00000526761 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
CLNS1A-206ENST00000526761 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
CLNS1A-206ENST00000526761 PEG3Q9GZU2 1588 aa13.79□□□□□ -0.2
CLNS1A-206ENST00000526761 BAZ1BQ9UIG0 1483 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-206ENST00000526761 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
CLNS1A-206ENST00000526761 TOP2AP11388 1531 aaKnown RBP13.66□□□□□ -0.22
CLNS1A-206ENST00000526761 CCDC88BA6NC98 1476 aa13.62□□□□□ -0.23
CLNS1A-206ENST00000526761 CADPSQ9ULU8 1353 aa13.49□□□□□ -0.25
CLNS1A-206ENST00000526761 NESP48681 1621 aa13.47□□□□□ -0.25
CLNS1A-206ENST00000526761 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
CLNS1A-206ENST00000526761 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
CLNS1A-206ENST00000526761 CFTRP13569 1480 aa13.42□□□□□ -0.26
CLNS1A-206ENST00000526761 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-206ENST00000526761 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
CLNS1A-206ENST00000526761 PDS5BQ9NTI5 1447 aa13.31□□□□□ -0.28
CLNS1A-206ENST00000526761 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
CLNS1A-206ENST00000526761 C1QBPQ07021 282 aaKnown RBP13.27□□□□□ -0.29
CLNS1A-206ENST00000526761 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
CLNS1A-206ENST00000526761 CEP164Q9UPV0 1460 aa13.21□□□□□ -0.3
CLNS1A-206ENST00000526761 KIF21AQ7Z4S6 1674 aa13.19□□□□□ -0.3
CLNS1A-206ENST00000526761 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
CLNS1A-206ENST00000526761 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
CLNS1A-206ENST00000526761 URB2Q14146 1524 aaKnown RBP13.15□□□□□ -0.3
CLNS1A-206ENST00000526761 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
CLNS1A-206ENST00000526761 PRDM2Q13029 1718 aa13.15□□□□□ -0.3
CLNS1A-206ENST00000526761 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.31
CLNS1A-206ENST00000526761 MRC2Q9UBG0 1479 aa13.13□□□□□ -0.31
CLNS1A-206ENST00000526761 CUX1P39880 1505 aa13.12□□□□□ -0.31
CLNS1A-206ENST00000526761 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
CLNS1A-206ENST00000526761 TOPBP1Q92547 1522 aa13.1□□□□□ -0.31
CLNS1A-206ENST00000526761 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
CLNS1A-206ENST00000526761 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
CLNS1A-206ENST00000526761 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
CLNS1A-206ENST00000526761 DNMBPQ6XZF7 1577 aa13.05□□□□□ -0.32
CLNS1A-206ENST00000526761 WDR62O43379 1518 aa13.04□□□□□ -0.32
CLNS1A-206ENST00000526761 SOGA1O94964 1423 aa13.03□□□□□ -0.32
CLNS1A-206ENST00000526761 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
CLNS1A-206ENST00000526761 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
CLNS1A-206ENST00000526761 TOP2BQ02880 1626 aa13.02□□□□□ -0.33
CLNS1A-206ENST00000526761 CUX2O14529 1486 aa13.01□□□□□ -0.33
CLNS1A-206ENST00000526761 POLA1P09884 1462 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-206ENST00000526761 BIVM-ERCC5R4GMW8 1640 aa12.98□□□□□ -0.33
CLNS1A-206ENST00000526761 TDRD9Q8NDG6 1382 aaKnown RBP12.96□□□□□ -0.33
CLNS1A-206ENST00000526761 FAM9AQ8IZU1 332 aaPredicted RBP12.94□□□□□ -0.34
CLNS1A-206ENST00000526761 IFT140Q96RY7 1462 aa12.93□□□□□ -0.34
CLNS1A-206ENST00000526761 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
CLNS1A-206ENST00000526761 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLNS1A-206ENST00000526761 ZNF608Q9ULD9 1512 aaPredicted RBP12.92□□□□□ -0.34
CLNS1A-206ENST00000526761 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
CLNS1A-206ENST00000526761 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
CLNS1A-206ENST00000526761 IGF1RP08069 1367 aa12.86□□□□□ -0.35
CLNS1A-206ENST00000526761 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
CLNS1A-206ENST00000526761 KIF27Q86VH2 1401 aa12.84□□□□□ -0.35
CLNS1A-206ENST00000526761 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
CLNS1A-206ENST00000526761 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
CLNS1A-206ENST00000526761 WDR97A6NE52 1622 aa12.77□□□□□ -0.36
CLNS1A-206ENST00000526761 FBLN2P98095 1184 aa12.77□□□□□ -0.37
CLNS1A-206ENST00000526761 GRIN2BQ13224 1484 aa12.77□□□□□ -0.37
CLNS1A-206ENST00000526761 LOC105371045A0A1W2PR82 267 aa12.76□□□□□ -0.37
CLNS1A-206ENST00000526761 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms