RNA–Protein interactions for RNA: ENST00000526481.6

CTSB-211, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-211ENST00000526481 MYO5CQ9NQX4 1742 aa22.6■■□□□ 1.21
CTSB-211ENST00000526481 HOXD11P31277 338 aaPredicted RBP22.57■■□□□ 1.2
CTSB-211ENST00000526481 RNF216Q9NWF9 866 aaPredicted RBP22.57■■□□□ 1.2
CTSB-211ENST00000526481 ITSN2Q9NZM3 1697 aa22.57■■□□□ 1.2
CTSB-211ENST00000526481 PREX2Q70Z35 1606 aa22.57■■□□□ 1.2
CTSB-211ENST00000526481 GLI2P10070 1586 aa22.56■■□□□ 1.2
CTSB-211ENST00000526481 KCNH8Q96L42 1107 aa22.56■■□□□ 1.2
CTSB-211ENST00000526481 MAP3K4Q9Y6R4 1608 aa22.56■■□□□ 1.2
CTSB-211ENST00000526481 CDC42BPBQ9Y5S2 1711 aa22.55■■□□□ 1.2
CTSB-211ENST00000526481 PHLDB1Q86UU1 1377 aa22.53■■□□□ 1.2
CTSB-211ENST00000526481 TSPOAP1O95153 1857 aa22.51■■□□□ 1.19
CTSB-211ENST00000526481 PPRC1Q5VV67 1664 aaKnown RBP22.5■■□□□ 1.19
CTSB-211ENST00000526481 NPM3O75607 178 aaKnown RBP22.49■■□□□ 1.19
CTSB-211ENST00000526481 GPATCH8Q9UKJ3 1502 aaKnown RBP22.48■■□□□ 1.19
CTSB-211ENST00000526481 MYOM3Q5VTT5 1437 aa22.47■■□□□ 1.19
CTSB-211ENST00000526481 CCNB3Q8WWL7 1395 aa22.46■■□□□ 1.19
CTSB-211ENST00000526481 PTPN23Q9H3S7 1636 aa22.42■■□□□ 1.18
CTSB-211ENST00000526481 ARHGAP5Q13017 1502 aa22.42■■□□□ 1.18
CTSB-211ENST00000526481 ARAP3Q8WWN8 1544 aa22.42■■□□□ 1.18
CTSB-211ENST00000526481 FAM69CQ0P6D2 419 aa22.42■■□□□ 1.18
CTSB-211ENST00000526481 SAMD9LQ8IVG5 1584 aa22.42■■□□□ 1.18
CTSB-211ENST00000526481 FGD6Q6ZV73 1430 aa22.41■■□□□ 1.18
CTSB-211ENST00000526481 CD109Q6YHK3 1445 aa22.4■■□□□ 1.18
CTSB-211ENST00000526481 PLCH2O75038 1416 aa22.4■■□□□ 1.18
CTSB-211ENST00000526481 CFAP74Q9C0B2 1584 aa22.38■■□□□ 1.17
CTSB-211ENST00000526481 CAMSAP2Q08AD1 1489 aa22.36■■□□□ 1.17
CTSB-211ENST00000526481 RRBP1Q9P2E9 1410 aaKnown RBP22.36■■□□□ 1.17
CTSB-211ENST00000526481 MIA2Q96PC5 1412 aa22.35■■□□□ 1.17
CTSB-211ENST00000526481 TCOF1Q13428 1488 aaKnown RBP22.34■■□□□ 1.17
CTSB-211ENST00000526481 ABCC1P33527 1531 aa22.34■■□□□ 1.17
CTSB-211ENST00000526481 FANCAO15360 1455 aa22.34■■□□□ 1.17
CTSB-211ENST00000526481 SYCP2Q9BX26 1530 aa22.31■■□□□ 1.16
CTSB-211ENST00000526481 CFDP1Q9UEE9 299 aaPredicted RBP22.31■■□□□ 1.16
CTSB-211ENST00000526481 ZNF644Q9H582 1327 aaPredicted RBP22.3■■□□□ 1.16
CTSB-211ENST00000526481 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
CTSB-211ENST00000526481 CROCC2H7BZ55 1655 aa22.29■■□□□ 1.16
CTSB-211ENST00000526481 NEO1Q92859 1461 aa22.28■■□□□ 1.16
CTSB-211ENST00000526481 ARHGEF12Q9NZN5 1544 aa22.27■■□□□ 1.16
CTSB-211ENST00000526481 ZNF777Q9ULD5 760 aaPredicted RBP22.27■■□□□ 1.16
CTSB-211ENST00000526481 DNMT1P26358 1616 aaKnown RBP22.27■■□□□ 1.16
CTSB-211ENST00000526481 TEX14Q8IWB6 1497 aa22.27■■□□□ 1.16
CTSB-211ENST00000526481 ADGRL1O94910 1474 aa22.25■■□□□ 1.15
CTSB-211ENST00000526481 AKNAQ7Z591 1439 aa22.24■■□□□ 1.15
CTSB-211ENST00000526481 ARHGEF5Q12774 1597 aa22.24■■□□□ 1.15
CTSB-211ENST00000526481 EFCAB2Q5VUJ9 269 aa22.23■■□□□ 1.15
CTSB-211ENST00000526481 RICTORQ6R327 1708 aa22.23■■□□□ 1.15
CTSB-211ENST00000526481 PLEKHH2Q8IVE3 1493 aa22.22■■□□□ 1.15
CTSB-211ENST00000526481 FRMPD1Q5SYB0 1578 aa22.21■■□□□ 1.15
CTSB-211ENST00000526481 FAM50AQ14320 339 aaKnown RBP22.21■■□□□ 1.15
CTSB-211ENST00000526481 MBD5Q9P267 1494 aa22.21■■□□□ 1.15
CTSB-211ENST00000526481 KIAA1107Q9UPP5 1409 aa22.18■■□□□ 1.14
CTSB-211ENST00000526481 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.18■■□□□ 1.14
CTSB-211ENST00000526481 DCAF8L1A6NGE4 600 aa22.18■■□□□ 1.14
CTSB-211ENST00000526481 CCDC141Q6ZP82 1450 aa22.17■■□□□ 1.14
CTSB-211ENST00000526481 SCAPERQ9BY12 1400 aa22.17■■□□□ 1.14
CTSB-211ENST00000526481 TRAPPC8Q9Y2L5 1435 aa22.17■■□□□ 1.14
CTSB-211ENST00000526481 ADGBQ8N7X0 1667 aa22.17■■□□□ 1.14
CTSB-211ENST00000526481 DAPK1P53355 1430 aa22.16■■□□□ 1.14
CTSB-211ENST00000526481 ABCC5O15440 1437 aa22.15■■□□□ 1.14
CTSB-211ENST00000526481 POGZQ7Z3K3 1410 aa22.15■■□□□ 1.14
CTSB-211ENST00000526481 KDM5CP41229 1560 aa22.14■■□□□ 1.13
CTSB-211ENST00000526481 HNRNPMP52272 730 aaKnown RBP eCLIP22.14■■□□□ 1.13
CTSB-211ENST00000526481 PTPRKQ15262 1439 aa22.14■■□□□ 1.13
CTSB-211ENST00000526481 INO80Q9ULG1 1556 aaPredicted RBP22.13■■□□□ 1.13
CTSB-211ENST00000526481 COL17A1Q9UMD9 1497 aaPredicted RBP22.13■■□□□ 1.13
CTSB-211ENST00000526481 DENND4BO75064 1496 aaPredicted RBP22.12■■□□□ 1.13
CTSB-211ENST00000526481 KDM6BO15054 1643 aa22.12■■□□□ 1.13
CTSB-211ENST00000526481 MAST1Q9Y2H9 1570 aa22.12■■□□□ 1.13
CTSB-211ENST00000526481 SHANK2Q9UPX8 1470 aa22.11■■□□□ 1.13
CTSB-211ENST00000526481 ZFYVE16Q7Z3T8 1539 aa22.11■■□□□ 1.13
CTSB-211ENST00000526481 ZNF518AQ6AHZ1 1483 aa22.09■■□□□ 1.13
CTSB-211ENST00000526481 HECW2Q9P2P5 1572 aa22.09■■□□□ 1.13
CTSB-211ENST00000526481 TRIM26Q12899 539 aaPredicted RBP22.09■■□□□ 1.13
CTSB-211ENST00000526481 KIDINS220Q9ULH0 1771 aa22.09■■□□□ 1.13
CTSB-211ENST00000526481 ZMYM4Q5VZL5 1548 aa22.08■■□□□ 1.13
CTSB-211ENST00000526481 ITGAEP38570 1179 aa22.08■■□□□ 1.13
CTSB-211ENST00000526481 C9orf84Q5VXU9 1444 aa22.07■■□□□ 1.12
CTSB-211ENST00000526481 ATP7AQ04656 1500 aa22.06■■□□□ 1.12
CTSB-211ENST00000526481 ABCA6Q8N139 1617 aa22.05■■□□□ 1.12
CTSB-211ENST00000526481 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
CTSB-211ENST00000526481 PLXNC1O60486 1568 aa22.04■■□□□ 1.12
CTSB-211ENST00000526481 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
CTSB-211ENST00000526481 AFAP1Q8N556 730 aa22.04■■□□□ 1.12
CTSB-211ENST00000526481 ADGRL2O95490 1459 aa22.03■■□□□ 1.12
CTSB-211ENST00000526481 DIP2CQ9Y2E4 1556 aa22■■□□□ 1.11
CTSB-211ENST00000526481 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
CTSB-211ENST00000526481 ARHGEF40Q8TER5 1519 aa21.99■■□□□ 1.11
CTSB-211ENST00000526481 MLH3Q9UHC1 1453 aa21.98■■□□□ 1.11
CTSB-211ENST00000526481 SPAG9O60271 1321 aaKnown RBP21.97■■□□□ 1.11
CTSB-211ENST00000526481 RSPH4AQ5TD94 716 aa21.96■■□□□ 1.11
CTSB-211ENST00000526481 RTEL1-TNFRSF6BF6WH68 1400 aa21.96■■□□□ 1.11
CTSB-211ENST00000526481 YEATS2Q9ULM3 1422 aa21.96■■□□□ 1.11
CTSB-211ENST00000526481 PCGF6Q9BYE7 350 aa21.95■■□□□ 1.1
CTSB-211ENST00000526481 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
CTSB-211ENST00000526481 NCOA1Q15788 1441 aa21.94■■□□□ 1.1
CTSB-211ENST00000526481 SIGLEC1Q9BZZ2 1709 aa21.94■■□□□ 1.1
CTSB-211ENST00000526481 TSPY4P0CV99 314 aa21.93■■□□□ 1.1
CTSB-211ENST00000526481 TSPY10P0CW01 314 aa21.93■■□□□ 1.1
CTSB-211ENST00000526481 ANKRD30AQ9BXX3 1397 aa21.91■■□□□ 1.1
CTSB-211ENST00000526481 KIF15Q9NS87 1388 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms