RNA–Protein interactions for RNA: ENST00000523313.1

CASC9-204, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 557 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-204ENST00000523313 EFCAB5A4FU69 1503 aa14.6□□□□□ -0.07
CASC9-204ENST00000523313 ARHGEF12Q9NZN5 1544 aa14.6□□□□□ -0.07
CASC9-204ENST00000523313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.08
CASC9-204ENST00000523313 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
CASC9-204ENST00000523313 HECW1Q76N89 1606 aa14.55□□□□□ -0.08
CASC9-204ENST00000523313 UBAP1LF5GYI3 381 aa14.55□□□□□ -0.08
CASC9-204ENST00000523313 MAGI2Q86UL8 1455 aa14.55□□□□□ -0.08
CASC9-204ENST00000523313 MED1Q15648 1581 aaPredicted RBP14.52□□□□□ -0.08
CASC9-204ENST00000523313 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.09
CASC9-204ENST00000523313 RAPGEF6Q8TEU7 1601 aa14.51□□□□□ -0.09
CASC9-204ENST00000523313 CFAP74Q9C0B2 1584 aa14.51□□□□□ -0.09
CASC9-204ENST00000523313 ATP10AO60312 1499 aa14.5□□□□□ -0.09
CASC9-204ENST00000523313 C9orf84Q5VXU9 1444 aa14.49□□□□□ -0.09
CASC9-204ENST00000523313 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
CASC9-204ENST00000523313 ZNF335Q9H4Z2 1342 aaPredicted RBP14.48□□□□□ -0.09
CASC9-204ENST00000523313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.48□□□□□ -0.09
CASC9-204ENST00000523313 NUP153P49790 1475 aaKnown RBP14.48□□□□□ -0.09
CASC9-204ENST00000523313 SCAPERQ9BY12 1400 aa14.48□□□□□ -0.09
CASC9-204ENST00000523313 HSPA1LP34931 641 aa14.46□□□□□ -0.09
CASC9-204ENST00000523313 PLEKHD1A6NEE1 506 aa14.45□□□□□ -0.1
CASC9-204ENST00000523313 SETD1BQ9UPS6 1966 aaKnown RBP14.45□□□□□ -0.1
CASC9-204ENST00000523313 C3P01024 1663 aa14.43□□□□□ -0.1
CASC9-204ENST00000523313 PRXQ9BXM0 1461 aa14.42□□□□□ -0.1
CASC9-204ENST00000523313 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
CASC9-204ENST00000523313 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
CASC9-204ENST00000523313 TRAPPC8Q9Y2L5 1435 aa14.41□□□□□ -0.1
CASC9-204ENST00000523313 SAMD9Q5K651 1589 aa14.4□□□□□ -0.1
CASC9-204ENST00000523313 CAMSAP1Q5T5Y3 1602 aa14.4□□□□□ -0.1
CASC9-204ENST00000523313 PIP4K2BP78356 416 aa14.39□□□□□ -0.11
CASC9-204ENST00000523313 PLCH2O75038 1416 aa14.37□□□□□ -0.11
CASC9-204ENST00000523313 AFAP1Q8N556 730 aa14.34□□□□□ -0.11
CASC9-204ENST00000523313 ESF1Q9H501 851 aaKnown RBP14.34□□□□□ -0.11
CASC9-204ENST00000523313 DIP2CQ9Y2E4 1556 aa14.34□□□□□ -0.11
CASC9-204ENST00000523313 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
CASC9-204ENST00000523313 MYT1LQ9UL68 1186 aa14.33□□□□□ -0.12
CASC9-204ENST00000523313 RANGAP1P46060 587 aaPredicted RBP14.32□□□□□ -0.12
CASC9-204ENST00000523313 ZNF518AQ6AHZ1 1483 aa14.31□□□□□ -0.12
CASC9-204ENST00000523313 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
CASC9-204ENST00000523313 KDM5CP41229 1560 aa14.3□□□□□ -0.12
CASC9-204ENST00000523313 REREQ9P2R6 1566 aa14.3□□□□□ -0.12
CASC9-204ENST00000523313 TOM1O60784 492 aa14.29□□□□□ -0.12
CASC9-204ENST00000523313 AGLP35573 1532 aa14.29□□□□□ -0.12
CASC9-204ENST00000523313 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
CASC9-204ENST00000523313 ABCA6Q8N139 1617 aa14.29□□□□□ -0.12
CASC9-204ENST00000523313 PKD2Q13563 968 aa14.28□□□□□ -0.12
CASC9-204ENST00000523313 TCOF1Q13428 1488 aaKnown RBP14.27□□□□□ -0.12
CASC9-204ENST00000523313 NPATQ14207 1427 aa14.27□□□□□ -0.12
CASC9-204ENST00000523313 CNTLNQ9NXG0 1405 aa14.27□□□□□ -0.12
CASC9-204ENST00000523313 PPP6R1Q9UPN7 881 aa14.27□□□□□ -0.13
CASC9-204ENST00000523313 PLA2R1Q13018 1463 aa14.26□□□□□ -0.13
CASC9-204ENST00000523313 RGS17Q9UGC6 210 aaPredicted RBP14.26□□□□□ -0.13
CASC9-204ENST00000523313 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
CASC9-204ENST00000523313 ZMYM3Q14202 1370 aa14.23□□□□□ -0.13
CASC9-204ENST00000523313 MLH3Q9UHC1 1453 aa14.23□□□□□ -0.13
CASC9-204ENST00000523313 MYO3AQ8NEV4 1616 aa14.22□□□□□ -0.13
CASC9-204ENST00000523313 ALKQ9UM73 1620 aa14.22□□□□□ -0.13
CASC9-204ENST00000523313 ARHGAP5Q13017 1502 aa14.21□□□□□ -0.13
CASC9-204ENST00000523313 CEP170BQ9Y4F5 1589 aaPredicted RBP14.21□□□□□ -0.14
CASC9-204ENST00000523313 ZNF142P52746 1687 aaPredicted RBP14.2□□□□□ -0.14
CASC9-204ENST00000523313 CPS1P31327 1500 aa14.2□□□□□ -0.14
CASC9-204ENST00000523313 KIF14Q15058 1648 aa14.19□□□□□ -0.14
CASC9-204ENST00000523313 MROH2AA6NES4 1674 aa14.19□□□□□ -0.14
CASC9-204ENST00000523313 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
CASC9-204ENST00000523313 SUPT6HQ7KZ85 1726 aaKnown RBP14.18□□□□□ -0.14
CASC9-204ENST00000523313 PTPRKQ15262 1439 aa14.16□□□□□ -0.14
CASC9-204ENST00000523313 KIDINS220Q9ULH0 1771 aa14.14□□□□□ -0.15
CASC9-204ENST00000523313 POTEAQ6S8J7 498 aa14.14□□□□□ -0.15
CASC9-204ENST00000523313 ATP1B4Q9UN42 357 aaPredicted RBP14.14□□□□□ -0.15
CASC9-204ENST00000523313 CLTCQ00610 1675 aaKnown RBP14.13□□□□□ -0.15
CASC9-204ENST00000523313 NEURL4Q96JN8 1562 aa14.13□□□□□ -0.15
CASC9-204ENST00000523313 ABCC1P33527 1531 aa14.12□□□□□ -0.15
CASC9-204ENST00000523313 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
CASC9-204ENST00000523313 VWDEQ8N2E2 1590 aa14.1□□□□□ -0.15
CASC9-204ENST00000523313 DNMT1P26358 1616 aaKnown RBP14.1□□□□□ -0.15
CASC9-204ENST00000523313 A2ML1A8K2U0 1454 aa14.1□□□□□ -0.15
CASC9-204ENST00000523313 TROQ12816 1431 aaPredicted RBP14.09□□□□□ -0.15
CASC9-204ENST00000523313 ITSN2Q9NZM3 1697 aa14.09□□□□□ -0.15
CASC9-204ENST00000523313 CDC42BPBQ9Y5S2 1711 aa14.09□□□□□ -0.15
CASC9-204ENST00000523313 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
CASC9-204ENST00000523313 POLR1AO95602 1720 aaPredicted RBP14.07□□□□□ -0.16
CASC9-204ENST00000523313 SETD1AO15047 1707 aaKnown RBP14.07□□□□□ -0.16
CASC9-204ENST00000523313 GGT6Q6P531 493 aa14.06□□□□□ -0.16
CASC9-204ENST00000523313 CLIP1P30622 1438 aa14.05□□□□□ -0.16
CASC9-204ENST00000523313 SAMD9LQ8IVG5 1584 aa14.05□□□□□ -0.16
CASC9-204ENST00000523313 LRRC7Q96NW7 1537 aa14.04□□□□□ -0.16
CASC9-204ENST00000523313 PREX2Q70Z35 1606 aa14.04□□□□□ -0.16
CASC9-204ENST00000523313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.03□□□□□ -0.16
CASC9-204ENST00000523313 RNF17Q9BXT8 1623 aaKnown RBP14.02□□□□□ -0.16
CASC9-204ENST00000523313 ANKLE2Q86XL3 938 aa14.02□□□□□ -0.17
CASC9-204ENST00000523313 PLXNC1O60486 1568 aa14.01□□□□□ -0.17
CASC9-204ENST00000523313 NPHP4O75161 1426 aaPredicted RBP14.01□□□□□ -0.17
CASC9-204ENST00000523313 SPAG9O60271 1321 aaKnown RBP14.01□□□□□ -0.17
CASC9-204ENST00000523313 STRCP1A6NGW2 1772 aa14.01□□□□□ -0.17
CASC9-204ENST00000523313 A2MP01023 1474 aa14□□□□□ -0.17
CASC9-204ENST00000523313 FBXO31Q5XUX0 539 aaPredicted RBP14□□□□□ -0.17
CASC9-204ENST00000523313 TNRQ92752 1358 aa13.99□□□□□ -0.17
CASC9-204ENST00000523313 FMN1Q68DA7 1419 aa13.98□□□□□ -0.17
CASC9-204ENST00000523313 MSH5O43196 834 aa13.98□□□□□ -0.17
CASC9-204ENST00000523313 HNRNPMP52272 730 aaKnown RBP eCLIP13.98□□□□□ -0.17
CASC9-204ENST00000523313 ZNF777Q9ULD5 760 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms