RNA–Protein interactions for RNA: ENST00000522901.1

AP3B1-207, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 3

Gene AP3B1, Length 1,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-207ENST00000522901 RANGAP1P46060 587 aaPredicted RBP14.01□□□□□ -0.17
AP3B1-207ENST00000522901 ZCCHC11Q5TAX3 1644 aaKnown RBP14.01□□□□□ -0.17
AP3B1-207ENST00000522901 EPRSP07814 1512 aaKnown RBP14□□□□□ -0.17
AP3B1-207ENST00000522901 WDR7Q9Y4E6 1490 aa13.99□□□□□ -0.17
AP3B1-207ENST00000522901 FHOD3Q2V2M9 1422 aa13.98□□□□□ -0.17
AP3B1-207ENST00000522901 PIP4P2Q8N4L2 257 aa13.98□□□□□ -0.17
AP3B1-207ENST00000522901 ATP10BO94823 1461 aa13.96□□□□□ -0.17
AP3B1-207ENST00000522901 RAPGEF6Q8TEU7 1601 aa13.93□□□□□ -0.18
AP3B1-207ENST00000522901 FXR2P51116 673 aaKnown RBP eCLIP13.93□□□□□ -0.18
AP3B1-207ENST00000522901 NUP153P49790 1475 aaKnown RBP13.93□□□□□ -0.18
AP3B1-207ENST00000522901 ARID3CA6NKF2 412 aa13.92□□□□□ -0.18
AP3B1-207ENST00000522901 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
AP3B1-207ENST00000522901 KCNH8Q96L42 1107 aa13.92□□□□□ -0.18
AP3B1-207ENST00000522901 TEX14Q8IWB6 1497 aa13.92□□□□□ -0.18
AP3B1-207ENST00000522901 FMN1Q68DA7 1419 aa13.91□□□□□ -0.18
AP3B1-207ENST00000522901 ARHGAP35Q9NRY4 1499 aa13.9□□□□□ -0.18
AP3B1-207ENST00000522901 MAP3K4Q9Y6R4 1608 aa13.9□□□□□ -0.19
AP3B1-207ENST00000522901 CD109Q6YHK3 1445 aa13.9□□□□□ -0.19
AP3B1-207ENST00000522901 KDM6BO15054 1643 aa13.88□□□□□ -0.19
AP3B1-207ENST00000522901 MAGI3Q5TCQ9 1506 aa13.88□□□□□ -0.19
AP3B1-207ENST00000522901 PLEKHD1A6NEE1 506 aa13.87□□□□□ -0.19
AP3B1-207ENST00000522901 PPRC1Q5VV67 1664 aaKnown RBP13.86□□□□□ -0.19
AP3B1-207ENST00000522901 FKBP8Q14318 412 aa13.86□□□□□ -0.19
AP3B1-207ENST00000522901 TSPOAP1O95153 1857 aa13.85□□□□□ -0.19
AP3B1-207ENST00000522901 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
AP3B1-207ENST00000522901 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
AP3B1-207ENST00000522901 CFAP43Q8NDM7 1665 aa13.84□□□□□ -0.19
AP3B1-207ENST00000522901 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
AP3B1-207ENST00000522901 CDK11AQ9UQ88 783 aaPredicted RBP13.81□□□□□ -0.2
AP3B1-207ENST00000522901 COL17A1Q9UMD9 1497 aaPredicted RBP13.8□□□□□ -0.2
AP3B1-207ENST00000522901 HECW1Q76N89 1606 aa13.8□□□□□ -0.2
AP3B1-207ENST00000522901 ABCA9Q8IUA7 1624 aa13.8□□□□□ -0.2
AP3B1-207ENST00000522901 ATP1B4Q9UN42 357 aaPredicted RBP13.8□□□□□ -0.2
AP3B1-207ENST00000522901 CLIP1P30622 1438 aa13.8□□□□□ -0.2
AP3B1-207ENST00000522901 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
AP3B1-207ENST00000522901 CDK13Q14004 1512 aaKnown RBP13.77□□□□□ -0.21
AP3B1-207ENST00000522901 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
AP3B1-207ENST00000522901 ARAP3Q8WWN8 1544 aa13.76□□□□□ -0.21
AP3B1-207ENST00000522901 NEO1Q92859 1461 aa13.76□□□□□ -0.21
AP3B1-207ENST00000522901 CCDC18Q5T9S5 1454 aa13.74□□□□□ -0.21
AP3B1-207ENST00000522901 PROM2Q8N271 834 aa13.73□□□□□ -0.21
AP3B1-207ENST00000522901 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.73□□□□□ -0.21
AP3B1-207ENST00000522901 FYCO1Q9BQS8 1478 aa13.73□□□□□ -0.21
AP3B1-207ENST00000522901 TROQ12816 1431 aaPredicted RBP13.72□□□□□ -0.21
AP3B1-207ENST00000522901 CEP162Q5TB80 1403 aa13.71□□□□□ -0.22
AP3B1-207ENST00000522901 HAX1O00165 279 aa13.7□□□□□ -0.22
AP3B1-207ENST00000522901 PCF11O94913 1555 aaKnown RBP13.7□□□□□ -0.22
AP3B1-207ENST00000522901 PLCH2O75038 1416 aa13.69□□□□□ -0.22
AP3B1-207ENST00000522901 FANCAO15360 1455 aa13.68□□□□□ -0.22
AP3B1-207ENST00000522901 TTC37Q6PGP7 1564 aa13.68□□□□□ -0.22
AP3B1-207ENST00000522901 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
AP3B1-207ENST00000522901 RAPGEF3O95398 923 aa13.67□□□□□ -0.22
AP3B1-207ENST00000522901 LOC105371045A0A1W2PR82 267 aa13.66□□□□□ -0.22
AP3B1-207ENST00000522901 EFCAB2Q5VUJ9 269 aa13.66□□□□□ -0.22
AP3B1-207ENST00000522901 CFAP74Q9C0B2 1584 aa13.66□□□□□ -0.22
AP3B1-207ENST00000522901 KIF14Q15058 1648 aa13.65□□□□□ -0.22
AP3B1-207ENST00000522901 KDM4FA0A1W2PPD8 638 aa13.65□□□□□ -0.22
AP3B1-207ENST00000522901 DENND4BO75064 1496 aaPredicted RBP13.65□□□□□ -0.22
AP3B1-207ENST00000522901 LRRIQ1Q96JM4 1722 aa13.61□□□□□ -0.23
AP3B1-207ENST00000522901 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
AP3B1-207ENST00000522901 SCAPERQ9BY12 1400 aa13.6□□□□□ -0.23
AP3B1-207ENST00000522901 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
AP3B1-207ENST00000522901 FRMPD1Q5SYB0 1578 aa13.59□□□□□ -0.23
AP3B1-207ENST00000522901 POGZQ7Z3K3 1410 aa13.58□□□□□ -0.24
AP3B1-207ENST00000522901 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
AP3B1-207ENST00000522901 MAGI2Q86UL8 1455 aa13.58□□□□□ -0.24
AP3B1-207ENST00000522901 ARHGAP5Q13017 1502 aa13.58□□□□□ -0.24
AP3B1-207ENST00000522901 MTUS2Q5JR59 1369 aa13.58□□□□□ -0.24
AP3B1-207ENST00000522901 MYO5CQ9NQX4 1742 aa13.57□□□□□ -0.24
AP3B1-207ENST00000522901 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
AP3B1-207ENST00000522901 ZMYM4Q5VZL5 1548 aa13.56□□□□□ -0.24
AP3B1-207ENST00000522901 ZNF518AQ6AHZ1 1483 aa13.55□□□□□ -0.24
AP3B1-207ENST00000522901 RICTORQ6R327 1708 aa13.54□□□□□ -0.24
AP3B1-207ENST00000522901 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
AP3B1-207ENST00000522901 CCNB3Q8WWL7 1395 aa13.53□□□□□ -0.24
AP3B1-207ENST00000522901 GPATCH8Q9UKJ3 1502 aaKnown RBP13.53□□□□□ -0.24
AP3B1-207ENST00000522901 PREX2Q70Z35 1606 aa13.53□□□□□ -0.24
AP3B1-207ENST00000522901 ZFYVE16Q7Z3T8 1539 aa13.52□□□□□ -0.25
AP3B1-207ENST00000522901 EHBP1L1Q8N3D4 1523 aa13.52□□□□□ -0.25
AP3B1-207ENST00000522901 ARID4BQ4LE39 1312 aaPredicted RBP13.51□□□□□ -0.25
AP3B1-207ENST00000522901 AFAP1Q8N556 730 aa13.51□□□□□ -0.25
AP3B1-207ENST00000522901 CFDP1Q9UEE9 299 aaPredicted RBP13.51□□□□□ -0.25
AP3B1-207ENST00000522901 YEATS2Q9ULM3 1422 aa13.5□□□□□ -0.25
AP3B1-207ENST00000522901 MIER1Q8N108 512 aa13.5□□□□□ -0.25
AP3B1-207ENST00000522901 ABCC1P33527 1531 aa13.49□□□□□ -0.25
AP3B1-207ENST00000522901 CDC42BPBQ9Y5S2 1711 aa13.49□□□□□ -0.25
AP3B1-207ENST00000522901 KDM5CP41229 1560 aa13.49□□□□□ -0.25
AP3B1-207ENST00000522901 ATP10AO60312 1499 aa13.48□□□□□ -0.25
AP3B1-207ENST00000522901 KIAA1107Q9UPP5 1409 aa13.48□□□□□ -0.25
AP3B1-207ENST00000522901 ZNF777Q9ULD5 760 aaPredicted RBP13.48□□□□□ -0.25
AP3B1-207ENST00000522901 MAP3K1Q13233 1512 aa13.48□□□□□ -0.25
AP3B1-207ENST00000522901 ARHGEF12Q9NZN5 1544 aa13.48□□□□□ -0.25
AP3B1-207ENST00000522901 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
AP3B1-207ENST00000522901 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
AP3B1-207ENST00000522901 TIAM1Q13009 1591 aa13.47□□□□□ -0.25
AP3B1-207ENST00000522901 C19orf67A6NJJ6 358 aa13.47□□□□□ -0.25
AP3B1-207ENST00000522901 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
AP3B1-207ENST00000522901 EVX2Q03828 476 aa13.47□□□□□ -0.25
AP3B1-207ENST00000522901 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
AP3B1-207ENST00000522901 TRAPPC8Q9Y2L5 1435 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms