RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 FGD6Q6ZV73 1430 aa39.4■■■■□ 3.9
NKX2-1-204ENST00000522719 ARHGAP5Q13017 1502 aa39.39■■■■□ 3.9
NKX2-1-204ENST00000522719 TSPOAP1O95153 1857 aa39.35■■■■□ 3.89
NKX2-1-204ENST00000522719 TRHP20396 242 aaPredicted RBP39.34■■■■□ 3.89
NKX2-1-204ENST00000522719 EFCAB2Q5VUJ9 269 aa39.33■■■■□ 3.89
NKX2-1-204ENST00000522719 RRBP1Q9P2E9 1410 aaKnown RBP39.33■■■■□ 3.89
NKX2-1-204ENST00000522719 CFAP74Q9C0B2 1584 aa39.32■■■■□ 3.88
NKX2-1-204ENST00000522719 PTPN23Q9H3S7 1636 aa39.31■■■■□ 3.88
NKX2-1-204ENST00000522719 FANCAO15360 1455 aa39.31■■■■□ 3.88
NKX2-1-204ENST00000522719 PPRC1Q5VV67 1664 aaKnown RBP39.3■■■■□ 3.88
NKX2-1-204ENST00000522719 TEX14Q8IWB6 1497 aa39.27■■■■□ 3.88
NKX2-1-204ENST00000522719 TCOF1Q13428 1488 aaKnown RBP39.27■■■■□ 3.88
NKX2-1-204ENST00000522719 SAMD9LQ8IVG5 1584 aa39.24■■■■□ 3.87
NKX2-1-204ENST00000522719 NEO1Q92859 1461 aa39.24■■■■□ 3.87
NKX2-1-204ENST00000522719 ZNF777Q9ULD5 760 aaPredicted RBP39.23■■■■□ 3.87
NKX2-1-204ENST00000522719 CAMSAP2Q08AD1 1489 aa39.23■■■■□ 3.87
NKX2-1-204ENST00000522719 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.22■■■■□ 3.87
NKX2-1-204ENST00000522719 PLEKHH2Q8IVE3 1493 aa39.21■■■■□ 3.87
NKX2-1-204ENST00000522719 ZNF644Q9H582 1327 aaPredicted RBP39.17■■■■□ 3.86
NKX2-1-204ENST00000522719 AKNAQ7Z591 1439 aa39.17■■■■□ 3.86
NKX2-1-204ENST00000522719 KIAA1107Q9UPP5 1409 aa39.16■■■■□ 3.86
NKX2-1-204ENST00000522719 ABCC1P33527 1531 aa39.15■■■■□ 3.86
NKX2-1-204ENST00000522719 FAM50AQ14320 339 aaKnown RBP39.14■■■■□ 3.86
NKX2-1-204ENST00000522719 ADGRL1O94910 1474 aa39.11■■■■□ 3.85
NKX2-1-204ENST00000522719 SYCP2Q9BX26 1530 aa39.08■■■■□ 3.85
NKX2-1-204ENST00000522719 TRIM26Q12899 539 aaPredicted RBP39.07■■■■□ 3.85
NKX2-1-204ENST00000522719 ARHGEF5Q12774 1597 aa39.06■■■■□ 3.84
NKX2-1-204ENST00000522719 MBD5Q9P267 1494 aa39.05■■■■□ 3.84
NKX2-1-204ENST00000522719 RSPH4AQ5TD94 716 aa39.05■■■■□ 3.84
NKX2-1-204ENST00000522719 SCAPERQ9BY12 1400 aa39.04■■■■□ 3.84
NKX2-1-204ENST00000522719 ARHGEF12Q9NZN5 1544 aa39.03■■■■□ 3.84
NKX2-1-204ENST00000522719 DNMT1P26358 1616 aaKnown RBP39.03■■■■□ 3.84
NKX2-1-204ENST00000522719 HNRNPMP52272 730 aaKnown RBP eCLIP39.02■■■■□ 3.84
NKX2-1-204ENST00000522719 CCDC141Q6ZP82 1450 aa38.97■■■■□ 3.83
NKX2-1-204ENST00000522719 DENND4BO75064 1496 aaPredicted RBP38.96■■■■□ 3.83
NKX2-1-204ENST00000522719 DAPK1P53355 1430 aa38.96■■■■□ 3.83
NKX2-1-204ENST00000522719 CROCC2H7BZ55 1655 aa38.95■■■■□ 3.83
NKX2-1-204ENST00000522719 ABCC5O15440 1437 aa38.94■■■■□ 3.82
NKX2-1-204ENST00000522719 TRAPPC8Q9Y2L5 1435 aa38.93■■■■□ 3.82
NKX2-1-204ENST00000522719 POGZQ7Z3K3 1410 aa38.92■■■■□ 3.82
NKX2-1-204ENST00000522719 ZNF518AQ6AHZ1 1483 aa38.92■■■■□ 3.82
NKX2-1-204ENST00000522719 RICTORQ6R327 1708 aa38.91■■■■□ 3.82
NKX2-1-204ENST00000522719 SHANK2Q9UPX8 1470 aa38.88■■■■□ 3.81
NKX2-1-204ENST00000522719 TSPY4P0CV99 314 aa38.86■■■■□ 3.81
NKX2-1-204ENST00000522719 TSPY10P0CW01 314 aa38.86■■■■□ 3.81
NKX2-1-204ENST00000522719 KDM5CP41229 1560 aa38.85■■■■□ 3.81
NKX2-1-204ENST00000522719 ITGAEP38570 1179 aa38.85■■■■□ 3.81
NKX2-1-204ENST00000522719 AFAP1Q8N556 730 aa38.85■■■■□ 3.81
NKX2-1-204ENST00000522719 MAST1Q9Y2H9 1570 aa38.84■■■■□ 3.81
NKX2-1-204ENST00000522719 PTPRKQ15262 1439 aa38.82■■■■□ 3.8
NKX2-1-204ENST00000522719 FRMPD1Q5SYB0 1578 aa38.82■■■■□ 3.8
NKX2-1-204ENST00000522719 COL17A1Q9UMD9 1497 aaPredicted RBP38.81■■■■□ 3.8
NKX2-1-204ENST00000522719 RAPGEF3O95398 923 aa38.8■■■■□ 3.8
NKX2-1-204ENST00000522719 C9orf84Q5VXU9 1444 aa38.79■■■■□ 3.8
NKX2-1-204ENST00000522719 KDM6BO15054 1643 aa38.79■■■■□ 3.8
NKX2-1-204ENST00000522719 ADGBQ8N7X0 1667 aa38.79■■■■□ 3.8
NKX2-1-204ENST00000522719 RTEL1-TNFRSF6BF6WH68 1400 aa38.77■■■■□ 3.8
NKX2-1-204ENST00000522719 SPAG9O60271 1321 aaKnown RBP38.76■■■■□ 3.8
NKX2-1-204ENST00000522719 ZMYM4Q5VZL5 1548 aa38.76■■■■□ 3.79
NKX2-1-204ENST00000522719 INO80Q9ULG1 1556 aaPredicted RBP38.74■■■■□ 3.79
NKX2-1-204ENST00000522719 MLH3Q9UHC1 1453 aa38.74■■■■□ 3.79
NKX2-1-204ENST00000522719 HECW2Q9P2P5 1572 aa38.74■■■■□ 3.79
NKX2-1-204ENST00000522719 ADGRL2O95490 1459 aa38.73■■■■□ 3.79
NKX2-1-204ENST00000522719 ROCK1Q13464 1354 aa38.72■■■■□ 3.79
NKX2-1-204ENST00000522719 ZFYVE16Q7Z3T8 1539 aa38.72■■■■□ 3.79
NKX2-1-204ENST00000522719 CHIC2Q9UKJ5 165 aa38.72■■■■□ 3.79
NKX2-1-204ENST00000522719 ATP7AQ04656 1500 aa38.71■■■■□ 3.79
NKX2-1-204ENST00000522719 KIDINS220Q9ULH0 1771 aa38.7■■■■□ 3.79
NKX2-1-204ENST00000522719 ANKRD30AQ9BXX3 1397 aa38.68■■■■□ 3.78
NKX2-1-204ENST00000522719 MAGI2Q86UL8 1455 aa38.68■■■■□ 3.78
NKX2-1-204ENST00000522719 PLXNC1O60486 1568 aa38.68■■■■□ 3.78
NKX2-1-204ENST00000522719 NCOA1Q15788 1441 aa38.67■■■■□ 3.78
NKX2-1-204ENST00000522719 PCGF6Q9BYE7 350 aa38.65■■■■□ 3.78
NKX2-1-204ENST00000522719 MYT1LQ9UL68 1186 aa38.63■■■■□ 3.77
NKX2-1-204ENST00000522719 HFM1A2PYH4 1435 aa38.57■■■■□ 3.77
NKX2-1-204ENST00000522719 GCC2Q8IWJ2 1684 aa38.56■■■■□ 3.76
NKX2-1-204ENST00000522719 RRP7BPQ9NSQ0 103 aa38.55■■■■□ 3.76
NKX2-1-204ENST00000522719 KIF15Q9NS87 1388 aa38.55■■■■□ 3.76
NKX2-1-204ENST00000522719 ABCA6Q8N139 1617 aa38.54■■■■□ 3.76
NKX2-1-204ENST00000522719 DIP2CQ9Y2E4 1556 aa38.52■■■■□ 3.76
NKX2-1-204ENST00000522719 NAIPQ13075 1403 aa38.51■■■■□ 3.76
NKX2-1-204ENST00000522719 DUOX2Q9NRD8 1548 aa38.51■■■■□ 3.76
NKX2-1-204ENST00000522719 YEATS2Q9ULM3 1422 aa38.51■■■■□ 3.75
NKX2-1-204ENST00000522719 ARHGEF40Q8TER5 1519 aa38.5■■■■□ 3.75
NKX2-1-204ENST00000522719 SETD5Q9C0A6 1442 aa38.46■■■■□ 3.75
NKX2-1-204ENST00000522719 ATP10AO60312 1499 aa38.45■■■■□ 3.75
NKX2-1-204ENST00000522719 A2MP01023 1474 aa38.43■■■■□ 3.74
NKX2-1-204ENST00000522719 DHX29Q7Z478 1369 aaKnown RBP38.42■■■■□ 3.74
NKX2-1-204ENST00000522719 ANKRD50Q9ULJ7 1429 aa38.42■■■■□ 3.74
NKX2-1-204ENST00000522719 ERBINQ96RT1 1412 aa38.41■■■■□ 3.74
NKX2-1-204ENST00000522719 REREQ9P2R6 1566 aa38.41■■■■□ 3.74
NKX2-1-204ENST00000522719 EIF2AK4Q9P2K8 1649 aaKnown RBP38.36■■■■□ 3.73
NKX2-1-204ENST00000522719 RAB3GAP2Q9H2M9 1393 aa38.31■■■■□ 3.72
NKX2-1-204ENST00000522719 HRCP23327 699 aa38.31■■■■□ 3.72
NKX2-1-204ENST00000522719 BCORL1Q5H9F3 1711 aa38.31■■■■□ 3.72
NKX2-1-204ENST00000522719 ACIN1Q9UKV3 1341 aaKnown RBP38.3■■■■□ 3.72
NKX2-1-204ENST00000522719 AGLP35573 1532 aa38.27■■■■□ 3.72
NKX2-1-204ENST00000522719 KIF3BO15066 747 aa38.21■■■■□ 3.71
NKX2-1-204ENST00000522719 SIGLEC1Q9BZZ2 1709 aa38.2■■■■□ 3.71
NKX2-1-204ENST00000522719 DEPDC5O75140 1603 aa38.19■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms