RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 CNTLNQ9NXG0 1405 aa12.97□□□□□ -0.33
CTNNA1-230ENST00000521724 USP35Q9P2H5 1018 aa12.97□□□□□ -0.33
CTNNA1-230ENST00000521724 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.349e-7■■■■□ 24.9
CTNNA1-230ENST00000521724 SNAPC4Q5SXM2 1469 aa12.95□□□□□ -0.34
CTNNA1-230ENST00000521724 AKNAQ7Z591 1439 aa12.95□□□□□ -0.34
CTNNA1-230ENST00000521724 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■□□ 17.4
CTNNA1-230ENST00000521724 NPM2Q86SE8 214 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-230ENST00000521724 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
CTNNA1-230ENST00000521724 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
CTNNA1-230ENST00000521724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTNNA1-230ENST00000521724 LAS1LQ9Y4W2 734 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-230ENST00000521724 UACAQ9BZF9 1416 aa12.94□□□□□ -0.34
CTNNA1-230ENST00000521724 URB2Q14146 1524 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-230ENST00000521724 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
CTNNA1-230ENST00000521724 FBLN2P98095 1184 aa12.93□□□□□ -0.34
CTNNA1-230ENST00000521724 LRRIQ1Q96JM4 1722 aa12.93□□□□□ -0.34
CTNNA1-230ENST00000521724 NCOA2Q15596 1464 aa12.93□□□□□ -0.34
CTNNA1-230ENST00000521724 C11orf95C9JLR9 678 aaPredicted RBP12.92□□□□□ -0.34
CTNNA1-230ENST00000521724 CTTNBP2Q8WZ74 1663 aa12.91□□□□□ -0.34
CTNNA1-230ENST00000521724 CHIC2Q9UKJ5 165 aa12.91□□□□□ -0.34
CTNNA1-230ENST00000521724 FMN1Q68DA7 1419 aa12.91□□□□□ -0.34
CTNNA1-230ENST00000521724 SMG6Q86US8 1419 aaKnown RBP12.91□□□□□ -0.34
CTNNA1-230ENST00000521724 RRP7BPQ9NSQ0 103 aa12.91□□□□□ -0.34
CTNNA1-230ENST00000521724 NAIPQ13075 1403 aa12.91□□□□□ -0.34
CTNNA1-230ENST00000521724 HFM1A2PYH4 1435 aa12.9□□□□□ -0.34
CTNNA1-230ENST00000521724 KDM5BQ9UGL1 1544 aa12.9□□□□□ -0.34
CTNNA1-230ENST00000521724 EIF5BO60841 1220 aaKnown RBP12.9□□□□□ -0.34
CTNNA1-230ENST00000521724 WASHC2CQ9Y4E1 1318 aa12.9□□□□□ -0.34
CTNNA1-230ENST00000521724 NUDCQ9Y266 331 aa12.9□□□□□ -0.35
CTNNA1-230ENST00000521724 PTPN23Q9H3S7 1636 aa12.89□□□□□ -0.35
CTNNA1-230ENST00000521724 PPM1GO15355 546 aaPredicted RBP12.89□□□□□ -0.35
CTNNA1-230ENST00000521724 CUL7Q14999 1698 aa12.89□□□□□ -0.35
CTNNA1-230ENST00000521724 RNF123Q5XPI4 1314 aa12.88□□□□□ -0.35
CTNNA1-230ENST00000521724 ARID3CA6NKF2 412 aa12.87□□□□□ -0.35
CTNNA1-230ENST00000521724 CCDC7Q96M83 1385 aa12.87□□□□□ -0.35
CTNNA1-230ENST00000521724 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
CTNNA1-230ENST00000521724 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
CTNNA1-230ENST00000521724 MYOM3Q5VTT5 1437 aa12.86□□□□□ -0.35
CTNNA1-230ENST00000521724 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
CTNNA1-230ENST00000521724 MAGI3Q5TCQ9 1506 aa12.86□□□□□ -0.35
CTNNA1-230ENST00000521724 DENND4BO75064 1496 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-230ENST00000521724 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
CTNNA1-230ENST00000521724 SAMD9Q5K651 1589 aa12.84□□□□□ -0.35
CTNNA1-230ENST00000521724 NCOA1Q15788 1441 aa12.84□□□□□ -0.35
CTNNA1-230ENST00000521724 FOXD1Q16676 465 aa12.84□□□□□ -0.35
CTNNA1-230ENST00000521724 KIF21AQ7Z4S6 1674 aa12.84□□□□□ -0.35
CTNNA1-230ENST00000521724 TCERG1O14776 1098 aaKnown RBP12.83□□□□□ -0.35
CTNNA1-230ENST00000521724 GSE1Q14687 1217 aa12.83□□□□□ -0.35
CTNNA1-230ENST00000521724 PDE4AP27815 886 aa12.83□□□□□ -0.36
CTNNA1-230ENST00000521724 KDM6BO15054 1643 aa12.82□□□□□ -0.36
CTNNA1-230ENST00000521724 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
CTNNA1-230ENST00000521724 LAMC3Q9Y6N6 1575 aa12.81□□□□□ -0.36
CTNNA1-230ENST00000521724 CNGB1Q14028 1251 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-230ENST00000521724 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
CTNNA1-230ENST00000521724 SENP3-EIF4A1A0A087X0R7 540 aa12.8□□□□□ -0.36
CTNNA1-230ENST00000521724 BACH2Q9BYV9 841 aa12.8□□□□□ -0.36
CTNNA1-230ENST00000521724 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
CTNNA1-230ENST00000521724 SUPT6HQ7KZ85 1726 aaKnown RBP12.79□□□□□ -0.36
CTNNA1-230ENST00000521724 L3MBTL2Q969R5 705 aa12.78□□□□□ -0.36
CTNNA1-230ENST00000521724 KIF7Q2M1P5 1343 aa12.78□□□□□ -0.36
CTNNA1-230ENST00000521724 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
CTNNA1-230ENST00000521724 ARHGEF11O15085 1522 aa12.78□□□□□ -0.36
CTNNA1-230ENST00000521724 EHBP1L1Q8N3D4 1523 aa12.76□□□□□ -0.37
CTNNA1-230ENST00000521724 MS4A1P11836 297 aa12.76□□□□□ -0.37
CTNNA1-230ENST00000521724 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
CTNNA1-230ENST00000521724 DDRGK1Q96HY6 314 aa12.76□□□□□ -0.37
CTNNA1-230ENST00000521724 CDK13Q14004 1512 aaKnown RBP12.75□□□□□ -0.37
CTNNA1-230ENST00000521724 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
CTNNA1-230ENST00000521724 EXOC6Q8TAG9 804 aa12.75□□□□□ -0.37
CTNNA1-230ENST00000521724 FRAT1Q92837 279 aaPredicted RBP12.75□□□□□ -0.37
CTNNA1-230ENST00000521724 NBPF8Q3BBV2 869 aa12.74□□□□□ -0.37
CTNNA1-230ENST00000521724 RSPH6AQ9H0K4 717 aa12.74□□□□□ -0.37
CTNNA1-230ENST00000521724 ZNF644Q9H582 1327 aaPredicted RBP12.73□□□□□ -0.37
CTNNA1-230ENST00000521724 RRP1P56182 461 aaKnown RBP12.73□□□□□ -0.37
CTNNA1-230ENST00000521724 TCOF1Q13428 1488 aaKnown RBP12.72□□□□□ -0.37
CTNNA1-230ENST00000521724 POLR1AO95602 1720 aaPredicted RBP12.72□□□□□ -0.37
CTNNA1-230ENST00000521724 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
CTNNA1-230ENST00000521724 THOC2Q8NI27 1593 aaKnown RBP12.72□□□□□ -0.37
CTNNA1-230ENST00000521724 TMC1Q8TDI8 760 aa12.71□□□□□ -0.37
CTNNA1-230ENST00000521724 TARBP1Q13395 1621 aaKnown RBP12.71□□□□□ -0.37
CTNNA1-230ENST00000521724 POLR3GLQ9BT43 218 aa12.71□□□□□ -0.38
CTNNA1-230ENST00000521724 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
CTNNA1-230ENST00000521724 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
CTNNA1-230ENST00000521724 SPATA31E1Q6ZUB1 1445 aa12.69□□□□□ -0.38
CTNNA1-230ENST00000521724 DHX29Q7Z478 1369 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-230ENST00000521724 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
CTNNA1-230ENST00000521724 RCAN3Q9UKA8 241 aa12.68□□□□□ -0.38
CTNNA1-230ENST00000521724 GCC2Q8IWJ2 1684 aa12.68□□□□□ -0.38
CTNNA1-230ENST00000521724 SLC4A3P48751 1232 aa12.68□□□□□ -0.38
CTNNA1-230ENST00000521724 ZNF608Q9ULD9 1512 aaPredicted RBP12.68□□□□□ -0.38
CTNNA1-230ENST00000521724 FAM43AQ8N2R8 423 aa12.68□□□□□ -0.38
CTNNA1-230ENST00000521724 SENP3Q9H4L4 574 aaPredicted RBP12.68□□□□□ -0.38
CTNNA1-230ENST00000521724 ANKRD30BQ9BXX2 1392 aa12.66□□□□□ -0.38
CTNNA1-230ENST00000521724 IQGAP2Q13576 1575 aa12.65□□□□□ -0.38
CTNNA1-230ENST00000521724 PBRM1Q86U86 1689 aa12.65□□□□□ -0.38
CTNNA1-230ENST00000521724 PKNOX2Q96KN3 472 aa12.65□□□□□ -0.38
CTNNA1-230ENST00000521724 WDR62O43379 1518 aa12.64□□□□□ -0.39
CTNNA1-230ENST00000521724 ABCC5O15440 1437 aa12.64□□□□□ -0.39
CTNNA1-230ENST00000521724 MIA2Q96PC5 1412 aa12.64□□□□□ -0.39
CTNNA1-230ENST00000521724 DAPK1P53355 1430 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms