RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 ANO8Q9HCE9 1232 aaPredicted RBP24.05■■□□□ 1.44
TRAM1-205ENST00000521425 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
TRAM1-205ENST00000521425 DCAF11Q8TEB1 546 aa24.04■■□□□ 1.44
TRAM1-205ENST00000521425 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
TRAM1-205ENST00000521425 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
TRAM1-205ENST00000521425 CUL7Q14999 1698 aa24.01■■□□□ 1.43
TRAM1-205ENST00000521425 RBM19Q9Y4C8 960 aaKnown RBP24■■□□□ 1.43
TRAM1-205ENST00000521425 MAP3K1Q13233 1512 aa23.99■■□□□ 1.43
TRAM1-205ENST00000521425 TIMELESSQ9UNS1 1208 aa23.99■■□□□ 1.43
TRAM1-205ENST00000521425 NUP155O75694 1391 aa23.97■■□□□ 1.43
TRAM1-205ENST00000521425 CARD11Q9BXL7 1154 aa23.96■■□□□ 1.43
TRAM1-205ENST00000521425 CTTNBP2Q8WZ74 1663 aa23.95■■□□□ 1.43
TRAM1-205ENST00000521425 IQGAP2Q13576 1575 aa23.95■■□□□ 1.42
TRAM1-205ENST00000521425 PTPN23Q9H3S7 1636 aa23.93■■□□□ 1.42
TRAM1-205ENST00000521425 CFAP43Q8NDM7 1665 aa23.92■■□□□ 1.42
TRAM1-205ENST00000521425 KDM6BO15054 1643 aa23.91■■□□□ 1.42
TRAM1-205ENST00000521425 ABCA5Q8WWZ7 1642 aa23.9■■□□□ 1.42
TRAM1-205ENST00000521425 SUPT6HQ7KZ85 1726 aaKnown RBP23.87■■□□□ 1.41
TRAM1-205ENST00000521425 CCDC136Q96JN2 1154 aa23.87■■□□□ 1.41
TRAM1-205ENST00000521425 B4GALNT3Q6L9W6 998 aa23.86■■□□□ 1.41
TRAM1-205ENST00000521425 EHBP1L1Q8N3D4 1523 aa23.86■■□□□ 1.41
TRAM1-205ENST00000521425 KIF7Q2M1P5 1343 aa23.85■■□□□ 1.41
TRAM1-205ENST00000521425 ABCC5O15440 1437 aa23.85■■□□□ 1.41
TRAM1-205ENST00000521425 ST20-MTHFSA0A0A6YYL1 179 aa23.84■■□□□ 1.41
TRAM1-205ENST00000521425 CCER2I3L3R5 266 aa23.84■■□□□ 1.41
TRAM1-205ENST00000521425 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
TRAM1-205ENST00000521425 PRKRIP1Q9H875 184 aaPredicted RBP23.83■■□□□ 1.41
TRAM1-205ENST00000521425 DAPK1P53355 1430 aa23.83■■□□□ 1.4
TRAM1-205ENST00000521425 TMC1Q8TDI8 760 aa23.82■■□□□ 1.4
TRAM1-205ENST00000521425 NUP153P49790 1475 aaKnown RBP23.81■■□□□ 1.4
TRAM1-205ENST00000521425 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
TRAM1-205ENST00000521425 LRRIQ1Q96JM4 1722 aa23.8■■□□□ 1.4
TRAM1-205ENST00000521425 IFT140Q96RY7 1462 aa23.8■■□□□ 1.4
TRAM1-205ENST00000521425 UGGT2Q9NYU1 1516 aa23.8■■□□□ 1.4
TRAM1-205ENST00000521425 CARMIL2Q6F5E8 1435 aa23.79■■□□□ 1.4
TRAM1-205ENST00000521425 MSH5O43196 834 aa23.79■■□□□ 1.4
TRAM1-205ENST00000521425 CC2D1BQ5T0F9 858 aaKnown RBP23.79■■□□□ 1.4
TRAM1-205ENST00000521425 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
TRAM1-205ENST00000521425 KIAA0586Q9BVV6 1533 aa23.78■■□□□ 1.4
TRAM1-205ENST00000521425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.78■■□□□ 1.4
TRAM1-205ENST00000521425 SAMD9Q5K651 1589 aa23.76■■□□□ 1.39
TRAM1-205ENST00000521425 PTPRGP23470 1445 aa23.76■■□□□ 1.39
TRAM1-205ENST00000521425 ARHGEF11O15085 1522 aa23.75■■□□□ 1.39
TRAM1-205ENST00000521425 NBPF1Q3BBV0 1214 aa23.75■■□□□ 1.39
TRAM1-205ENST00000521425 DISP1Q96F81 1524 aa23.75■■□□□ 1.39
TRAM1-205ENST00000521425 HECW1Q76N89 1606 aa23.75■■□□□ 1.39
TRAM1-205ENST00000521425 DEKP35659 375 aaKnown RBP23.74■■□□□ 1.39
TRAM1-205ENST00000521425 ANKRD30AQ9BXX3 1397 aa23.72■■□□□ 1.39
TRAM1-205ENST00000521425 CCDC7Q96M83 1385 aa23.72■■□□□ 1.39
TRAM1-205ENST00000521425 ANKRD30BQ9BXX2 1392 aa23.72■■□□□ 1.39
TRAM1-205ENST00000521425 ADAMTS12P58397 1594 aa23.71■■□□□ 1.39
TRAM1-205ENST00000521425 ANKRD50Q9ULJ7 1429 aa23.68■■□□□ 1.38
TRAM1-205ENST00000521425 DENND4BO75064 1496 aaPredicted RBP23.68■■□□□ 1.38
TRAM1-205ENST00000521425 USP47Q96K76 1375 aa23.68■■□□□ 1.38
TRAM1-205ENST00000521425 AFAP1Q8N556 730 aa23.68■■□□□ 1.38
TRAM1-205ENST00000521425 TROQ12816 1431 aaPredicted RBP23.68■■□□□ 1.38
TRAM1-205ENST00000521425 RTN4Q9NQC3 1192 aaKnown RBP23.68■■□□□ 1.38
TRAM1-205ENST00000521425 PBRM1Q86U86 1689 aa23.68■■□□□ 1.38
TRAM1-205ENST00000521425 NBR1Q14596 966 aa23.67■■□□□ 1.38
TRAM1-205ENST00000521425 WDR62O43379 1518 aa23.66■■□□□ 1.38
TRAM1-205ENST00000521425 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
TRAM1-205ENST00000521425 MIA2Q96PC5 1412 aa23.64■■□□□ 1.38
TRAM1-205ENST00000521425 CAMSAP2Q08AD1 1489 aa23.63■■□□□ 1.37
TRAM1-205ENST00000521425 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.63■■□□□ 1.37
TRAM1-205ENST00000521425 EIF4G3O43432 1585 aaKnown RBP23.63■■□□□ 1.37
TRAM1-205ENST00000521425 NCOA1Q15788 1441 aa23.63■■□□□ 1.37
TRAM1-205ENST00000521425 NUTM2DQ5VT03 806 aaPredicted RBP23.62■■□□□ 1.37
TRAM1-205ENST00000521425 GPATCH8Q9UKJ3 1502 aaKnown RBP23.61■■□□□ 1.37
TRAM1-205ENST00000521425 ROCK2O75116 1388 aaKnown RBP23.59■■□□□ 1.37
TRAM1-205ENST00000521425 KIAA0556O60303 1618 aa23.57■■□□□ 1.36
TRAM1-205ENST00000521425 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
TRAM1-205ENST00000521425 KIF14Q15058 1648 aa23.56■■□□□ 1.36
TRAM1-205ENST00000521425 C9orf84Q5VXU9 1444 aa23.54■■□□□ 1.36
TRAM1-205ENST00000521425 CNTLNQ9NXG0 1405 aa23.54■■□□□ 1.36
TRAM1-205ENST00000521425 ATP10BO94823 1461 aa23.54■■□□□ 1.36
TRAM1-205ENST00000521425 TNNT2P45379 298 aaPredicted RBP23.54■■□□□ 1.36
TRAM1-205ENST00000521425 AKNAQ7Z591 1439 aa23.53■■□□□ 1.36
TRAM1-205ENST00000521425 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
TRAM1-205ENST00000521425 RAPGEF6Q8TEU7 1601 aa23.51■■□□□ 1.35
TRAM1-205ENST00000521425 KIF3BO15066 747 aa23.49■■□□□ 1.35
TRAM1-205ENST00000521425 NPM2Q86SE8 214 aaKnown RBP23.48■■□□□ 1.35
TRAM1-205ENST00000521425 TCOF1Q13428 1488 aaKnown RBP23.48■■□□□ 1.35
TRAM1-205ENST00000521425 RPRD2Q5VT52 1461 aaKnown RBP23.48■■□□□ 1.35
TRAM1-205ENST00000521425 KIAA1107Q9UPP5 1409 aa23.47■■□□□ 1.35
TRAM1-205ENST00000521425 GGT6Q6P531 493 aa23.47■■□□□ 1.35
TRAM1-205ENST00000521425 SAFB2Q14151 953 aaKnown RBP eCLIP23.46■■□□□ 1.35
TRAM1-205ENST00000521425 MAGI1Q96QZ7 1491 aaPredicted RBP23.46■■□□□ 1.35
TRAM1-205ENST00000521425 PLIN1O60240 522 aa23.44■■□□□ 1.34
TRAM1-205ENST00000521425 PANK3Q9H999 370 aa23.44■■□□□ 1.34
TRAM1-205ENST00000521425 PZPP20742 1482 aa23.43■■□□□ 1.34
TRAM1-205ENST00000521425 ROCK1Q13464 1354 aa23.42■■□□□ 1.34
TRAM1-205ENST00000521425 KDM5BQ9UGL1 1544 aa23.42■■□□□ 1.34
TRAM1-205ENST00000521425 CDCA7LQ96GN5 454 aa23.41■■□□□ 1.34
TRAM1-205ENST00000521425 EFCAB2Q5VUJ9 269 aa23.41■■□□□ 1.34
TRAM1-205ENST00000521425 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
TRAM1-205ENST00000521425 SKAP1Q86WV1 359 aa23.4■■□□□ 1.34
TRAM1-205ENST00000521425 CCDC144AA2RUR9 1427 aa23.4■■□□□ 1.34
TRAM1-205ENST00000521425 NEUROD2Q15784 382 aa23.38■■□□□ 1.33
TRAM1-205ENST00000521425 ARHGAP5Q13017 1502 aa23.37■■□□□ 1.33
TRAM1-205ENST00000521425 SPAG9O60271 1321 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms