RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
SMG7-215ENST00000515829 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
SMG7-215ENST00000515829 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
SMG7-215ENST00000515829 NCOA2Q15596 1464 aa13.43□□□□□ -0.26
SMG7-215ENST00000515829 ESF1Q9H501 851 aaKnown RBP13.42□□□□□ -0.26
SMG7-215ENST00000515829 NEUROD2Q15784 382 aa13.42□□□□□ -0.26
SMG7-215ENST00000515829 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
SMG7-215ENST00000515829 CNTLNQ9NXG0 1405 aa13.41□□□□□ -0.26
SMG7-215ENST00000515829 PPM1GO15355 546 aaPredicted RBP13.41□□□□□ -0.26
SMG7-215ENST00000515829 MSH5O43196 834 aa13.41□□□□□ -0.26
SMG7-215ENST00000515829 NBPF8Q3BBV2 869 aa13.4□□□□□ -0.26
SMG7-215ENST00000515829 EXOC6Q8TAG9 804 aa13.4□□□□□ -0.26
SMG7-215ENST00000515829 ROCK2O75116 1388 aaKnown RBP13.39□□□□□ -0.27
SMG7-215ENST00000515829 MAPKBP1O60336 1514 aa13.39□□□□□ -0.27
SMG7-215ENST00000515829 USP47Q96K76 1375 aa13.39□□□□□ -0.27
SMG7-215ENST00000515829 PLIN1O60240 522 aa13.39□□□□□ -0.27
SMG7-215ENST00000515829 FYCO1Q9BQS8 1478 aa13.39□□□□□ -0.27
SMG7-215ENST00000515829 KTN1Q86UP2 1357 aaKnown RBP13.38□□□□□ -0.27
SMG7-215ENST00000515829 RALBP1Q15311 655 aa13.38□□□□□ -0.27
SMG7-215ENST00000515829 UNC13AQ9UPW8 1703 aa13.38□□□□□ -0.27
SMG7-215ENST00000515829 HNRNPMP52272 730 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■□□□□ 8.9
SMG7-215ENST00000515829 PDS5BQ9NTI5 1447 aa13.38□□□□□ -0.27
SMG7-215ENST00000515829 C11orf95C9JLR9 678 aaPredicted RBP13.37□□□□□ -0.27
SMG7-215ENST00000515829 HFM1A2PYH4 1435 aa13.37□□□□□ -0.27
SMG7-215ENST00000515829 TNNT2P45379 298 aaPredicted RBP13.37□□□□□ -0.27
SMG7-215ENST00000515829 TMF1P82094 1093 aa13.37□□□□□ -0.27
SMG7-215ENST00000515829 ANKRD30AQ9BXX3 1397 aa13.36□□□□□ -0.27
SMG7-215ENST00000515829 PEG3Q9GZU2 1588 aa13.36□□□□□ -0.27
SMG7-215ENST00000515829 TCERG1O14776 1098 aaKnown RBP13.36□□□□□ -0.27
SMG7-215ENST00000515829 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
SMG7-215ENST00000515829 GAPVD1Q14C86 1478 aa13.35□□□□□ -0.27
SMG7-215ENST00000515829 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
SMG7-215ENST00000515829 NLRP13Q86W25 1043 aa13.34□□□□□ -0.27
SMG7-215ENST00000515829 NAIPQ13075 1403 aa13.34□□□□□ -0.27
SMG7-215ENST00000515829 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
SMG7-215ENST00000515829 MYBBP1AQ9BQG0 1328 aaKnown RBP13.33□□□□□ -0.28
SMG7-215ENST00000515829 AKNAQ7Z591 1439 aa13.33□□□□□ -0.28
SMG7-215ENST00000515829 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.28
SMG7-215ENST00000515829 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
SMG7-215ENST00000515829 SLC24A1O60721 1099 aa13.32□□□□□ -0.28
SMG7-215ENST00000515829 PDE4AP27815 886 aa13.32□□□□□ -0.28
SMG7-215ENST00000515829 KIF15Q9NS87 1388 aa13.32□□□□□ -0.28
SMG7-215ENST00000515829 HSP90AA1P07900 732 aaKnown RBP13.31□□□□□ -0.28
SMG7-215ENST00000515829 NESP48681 1621 aa13.31□□□□□ -0.28
SMG7-215ENST00000515829 SLC4A3P48751 1232 aa13.31□□□□□ -0.28
SMG7-215ENST00000515829 CDCA8Q53HL2 280 aa13.3□□□□□ -0.28
SMG7-215ENST00000515829 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
SMG7-215ENST00000515829 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
SMG7-215ENST00000515829 PANK3Q9H999 370 aa13.28□□□□□ -0.28
SMG7-215ENST00000515829 BECN1Q14457 450 aa13.28□□□□□ -0.28
SMG7-215ENST00000515829 POLA1P09884 1462 aaPredicted RBP13.28□□□□□ -0.28
SMG7-215ENST00000515829 CCDC146Q8IYE0 955 aa13.28□□□□□ -0.28
SMG7-215ENST00000515829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.27□□□□□ -0.281e-6■□□□□ 9.1
SMG7-215ENST00000515829 CRBNQ96SW2 442 aa13.27□□□□□ -0.29
SMG7-215ENST00000515829 AQRO60306 1485 aaKnown RBP eCLIP13.26□□□□□ -0.291e-6■■■■□ 20.5
SMG7-215ENST00000515829 EFCAB5A4FU69 1503 aa13.26□□□□□ -0.29
SMG7-215ENST00000515829 MAP3K1Q13233 1512 aa13.26□□□□□ -0.29
SMG7-215ENST00000515829 PDE3BQ13370 1112 aa13.26□□□□□ -0.29
SMG7-215ENST00000515829 PTPRKQ15262 1439 aa13.25□□□□□ -0.29
SMG7-215ENST00000515829 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
SMG7-215ENST00000515829 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
SMG7-215ENST00000515829 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
SMG7-215ENST00000515829 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
SMG7-215ENST00000515829 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
SMG7-215ENST00000515829 CARMIL2Q6F5E8 1435 aa13.23□□□□□ -0.29
SMG7-215ENST00000515829 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
SMG7-215ENST00000515829 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.22□□□□□ -0.29
SMG7-215ENST00000515829 GOLGA2Q08379 1002 aa13.22□□□□□ -0.29
SMG7-215ENST00000515829 FTSJ3Q8IY81 847 aaKnown RBP13.21□□□□□ -0.29
SMG7-215ENST00000515829 SLKQ9H2G2 1235 aaPredicted RBP13.21□□□□□ -0.3
SMG7-215ENST00000515829 EHBP1L1Q8N3D4 1523 aa13.2□□□□□ -0.3
SMG7-215ENST00000515829 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
SMG7-215ENST00000515829 CCDC144AA2RUR9 1427 aa13.19□□□□□ -0.3
SMG7-215ENST00000515829 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
SMG7-215ENST00000515829 ANKRD50Q9ULJ7 1429 aa13.17□□□□□ -0.3
SMG7-215ENST00000515829 ANP32BQ92688 251 aaKnown RBP13.17□□□□□ -0.3
SMG7-215ENST00000515829 NBPF1Q3BBV0 1214 aa13.17□□□□□ -0.3
SMG7-215ENST00000515829 MORC1Q86VD1 984 aa13.17□□□□□ -0.3
SMG7-215ENST00000515829 PTPN23Q9H3S7 1636 aa13.16□□□□□ -0.3
SMG7-215ENST00000515829 U2SURPO15042 1029 aaKnown RBP13.16□□□□□ -0.3
SMG7-215ENST00000515829 SMG6Q86US8 1419 aaKnown RBP13.16□□□□□ -0.3
SMG7-215ENST00000515829 SAFB2Q14151 953 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMG7-215ENST00000515829 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
SMG7-215ENST00000515829 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
SMG7-215ENST00000515829 ANKRD30BQ9BXX2 1392 aa13.16□□□□□ -0.3
SMG7-215ENST00000515829 PRDM2Q13029 1718 aa13.15□□□□□ -0.3
SMG7-215ENST00000515829 SUPT6HQ7KZ85 1726 aaKnown RBP13.15□□□□□ -0.3
SMG7-215ENST00000515829 SKAP1Q86WV1 359 aa13.15□□□□□ -0.3
SMG7-215ENST00000515829 ARID4BQ4LE39 1312 aaPredicted RBP13.15□□□□□ -0.3
SMG7-215ENST00000515829 DAPK1P53355 1430 aa13.14□□□□□ -0.31
SMG7-215ENST00000515829 MIA2Q96PC5 1412 aa13.14□□□□□ -0.31
SMG7-215ENST00000515829 RRP7AQ9Y3A4 280 aaKnown RBP13.14□□□□□ -0.31
SMG7-215ENST00000515829 PRG4Q92954 1404 aaPredicted RBP13.14□□□□□ -0.31
SMG7-215ENST00000515829 BRD4O60885 1362 aaPredicted RBP13.14□□□□□ -0.31
SMG7-215ENST00000515829 NCOA1Q15788 1441 aa13.14□□□□□ -0.31
SMG7-215ENST00000515829 MS4A1P11836 297 aa13.13□□□□□ -0.31
SMG7-215ENST00000515829 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
SMG7-215ENST00000515829 APAF1O14727 1248 aa13.13□□□□□ -0.31
SMG7-215ENST00000515829 DNMBPQ6XZF7 1577 aa13.13□□□□□ -0.31
SMG7-215ENST00000515829 CENPQQ7L2Z9 268 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms