RNA–Protein interactions for RNA: ENST00000514315.2

HMGCR-212, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-212ENST00000514315 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
HMGCR-212ENST00000514315 LMTK3Q96Q04 1460 aa12.24□□□□□ -0.45
HMGCR-212ENST00000514315 ABCA9Q8IUA7 1624 aa12.23□□□□□ -0.45
HMGCR-212ENST00000514315 MADDQ8WXG6 1647 aa12.23□□□□□ -0.45
HMGCR-212ENST00000514315 ARID3CA6NKF2 412 aa12.23□□□□□ -0.45
HMGCR-212ENST00000514315 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
HMGCR-212ENST00000514315 GOLGA3Q08378 1498 aa12.21□□□□□ -0.45
HMGCR-212ENST00000514315 HSPA2P54652 639 aa12.21□□□□□ -0.45
HMGCR-212ENST00000514315 PHLDB1Q86UU1 1377 aa12.2□□□□□ -0.46
HMGCR-212ENST00000514315 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
HMGCR-212ENST00000514315 FRMPD1Q5SYB0 1578 aa12.2□□□□□ -0.46
HMGCR-212ENST00000514315 SIGLEC1Q9BZZ2 1709 aa12.19□□□□□ -0.46
HMGCR-212ENST00000514315 ILDR2Q71H61 639 aa12.18□□□□□ -0.46
HMGCR-212ENST00000514315 RIMS1Q86UR5 1692 aaKnown RBP12.18□□□□□ -0.46
HMGCR-212ENST00000514315 CERKQ8TCT0 537 aa12.17□□□□□ -0.46
HMGCR-212ENST00000514315 NEO1Q92859 1461 aa12.16□□□□□ -0.46
HMGCR-212ENST00000514315 PRXQ9BXM0 1461 aa12.16□□□□□ -0.46
HMGCR-212ENST00000514315 RICTORQ6R327 1708 aa12.16□□□□□ -0.46
HMGCR-212ENST00000514315 ARID4BQ4LE39 1312 aaPredicted RBP12.15□□□□□ -0.46
HMGCR-212ENST00000514315 EHMT2Q96KQ7 1210 aa12.13□□□□□ -0.47
HMGCR-212ENST00000514315 RAPGEF6Q8TEU7 1601 aa12.1□□□□□ -0.47
HMGCR-212ENST00000514315 STRCQ7RTU9 1775 aa12.1□□□□□ -0.47
HMGCR-212ENST00000514315 SETD1BQ9UPS6 1966 aaKnown RBP12.09□□□□□ -0.47
HMGCR-212ENST00000514315 FHOD3Q2V2M9 1422 aa12.09□□□□□ -0.47
HMGCR-212ENST00000514315 SAMD9Q5K651 1589 aa12.09□□□□□ -0.47
HMGCR-212ENST00000514315 SOCS7O14512 581 aa12.08□□□□□ -0.48
HMGCR-212ENST00000514315 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.48
HMGCR-212ENST00000514315 AKNAQ7Z591 1439 aa12.08□□□□□ -0.48
HMGCR-212ENST00000514315 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
HMGCR-212ENST00000514315 NUP153P49790 1475 aaKnown RBP12.08□□□□□ -0.48
HMGCR-212ENST00000514315 DENND4BO75064 1496 aaPredicted RBP12.07□□□□□ -0.48
HMGCR-212ENST00000514315 ARHGEF40Q8TER5 1519 aa12.06□□□□□ -0.48
HMGCR-212ENST00000514315 MLECQ14165 292 aa12.05□□□□□ -0.48
HMGCR-212ENST00000514315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGCR-212ENST00000514315 FER1L4A9Z1Z3 1794 aa12.05□□□□□ -0.48
HMGCR-212ENST00000514315 PLEKHD1A6NEE1 506 aa12.04□□□□□ -0.48
HMGCR-212ENST00000514315 CEBPAP49715 358 aaPredicted RBP12.04□□□□□ -0.48
HMGCR-212ENST00000514315 FAM9AQ8IZU1 332 aaPredicted RBP12.04□□□□□ -0.48
HMGCR-212ENST00000514315 DISP3Q9P2K9 1392 aa12.04□□□□□ -0.48
HMGCR-212ENST00000514315 FANCAO15360 1455 aa12.03□□□□□ -0.48
HMGCR-212ENST00000514315 ZMYM4Q5VZL5 1548 aa12.03□□□□□ -0.48
HMGCR-212ENST00000514315 HECW1Q76N89 1606 aa12.03□□□□□ -0.48
HMGCR-212ENST00000514315 TTC37Q6PGP7 1564 aa12.02□□□□□ -0.49
HMGCR-212ENST00000514315 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
HMGCR-212ENST00000514315 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
HMGCR-212ENST00000514315 POGZQ7Z3K3 1410 aa12□□□□□ -0.49
HMGCR-212ENST00000514315 MAGI2Q86UL8 1455 aa12□□□□□ -0.49
HMGCR-212ENST00000514315 ZFYVE16Q7Z3T8 1539 aa12□□□□□ -0.49
HMGCR-212ENST00000514315 PREX1Q8TCU6 1659 aa12□□□□□ -0.49
HMGCR-212ENST00000514315 ARHGEF12Q9NZN5 1544 aa11.99□□□□□ -0.49
HMGCR-212ENST00000514315 RANGAP1P46060 587 aaPredicted RBP11.98□□□□□ -0.49
HMGCR-212ENST00000514315 EFCAB5A4FU69 1503 aa11.97□□□□□ -0.49
HMGCR-212ENST00000514315 SCAPERQ9BY12 1400 aa11.97□□□□□ -0.49
HMGCR-212ENST00000514315 CFAP74Q9C0B2 1584 aa11.96□□□□□ -0.49
HMGCR-212ENST00000514315 ATP10AO60312 1499 aa11.96□□□□□ -0.49
HMGCR-212ENST00000514315 PLCH2O75038 1416 aa11.95□□□□□ -0.5
HMGCR-212ENST00000514315 LTBP4Q8N2S1 1624 aa11.94□□□□□ -0.5
HMGCR-212ENST00000514315 C3P01024 1663 aa11.92□□□□□ -0.5
HMGCR-212ENST00000514315 AFAP1Q8N556 730 aa11.92□□□□□ -0.5
HMGCR-212ENST00000514315 CDK13Q14004 1512 aaKnown RBP11.91□□□□□ -0.5
HMGCR-212ENST00000514315 PTPRTO14522 1441 aa11.9□□□□□ -0.5
HMGCR-212ENST00000514315 C9orf84Q5VXU9 1444 aa11.9□□□□□ -0.5
HMGCR-212ENST00000514315 MYO5CQ9NQX4 1742 aa11.89□□□□□ -0.51
HMGCR-212ENST00000514315 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
HMGCR-212ENST00000514315 SPATA31D1Q6ZQQ2 1576 aa11.88□□□□□ -0.51
HMGCR-212ENST00000514315 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
HMGCR-212ENST00000514315 CDC42BPBQ9Y5S2 1711 aa11.87□□□□□ -0.51
HMGCR-212ENST00000514315 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
HMGCR-212ENST00000514315 LRRIQ1Q96JM4 1722 aa11.86□□□□□ -0.51
HMGCR-212ENST00000514315 KIF14Q15058 1648 aa11.86□□□□□ -0.51
HMGCR-212ENST00000514315 KDM5CP41229 1560 aa11.85□□□□□ -0.51
HMGCR-212ENST00000514315 DIP2CQ9Y2E4 1556 aa11.84□□□□□ -0.51
HMGCR-212ENST00000514315 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
HMGCR-212ENST00000514315 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
HMGCR-212ENST00000514315 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
HMGCR-212ENST00000514315 TRAPPC8Q9Y2L5 1435 aa11.83□□□□□ -0.52
HMGCR-212ENST00000514315 REREQ9P2R6 1566 aa11.83□□□□□ -0.52
HMGCR-212ENST00000514315 ABCA6Q8N139 1617 aa11.82□□□□□ -0.52
HMGCR-212ENST00000514315 IQSEC2Q5JU85 1478 aa11.82□□□□□ -0.52
HMGCR-212ENST00000514315 ZNF518AQ6AHZ1 1483 aa11.82□□□□□ -0.52
HMGCR-212ENST00000514315 NCOA1Q15788 1441 aa11.81□□□□□ -0.52
HMGCR-212ENST00000514315 KIDINS220Q9ULH0 1771 aa11.81□□□□□ -0.52
HMGCR-212ENST00000514315 MLH3Q9UHC1 1453 aa11.81□□□□□ -0.52
HMGCR-212ENST00000514315 AGLP35573 1532 aa11.81□□□□□ -0.52
HMGCR-212ENST00000514315 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
HMGCR-212ENST00000514315 NCKAP5LQ9HCH0 1330 aa11.8□□□□□ -0.52
HMGCR-212ENST00000514315 ZNF335Q9H4Z2 1342 aaPredicted RBP11.79□□□□□ -0.52
HMGCR-212ENST00000514315 CAMSAP1Q5T5Y3 1602 aa11.78□□□□□ -0.52
HMGCR-212ENST00000514315 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
HMGCR-212ENST00000514315 ARHGAP5Q13017 1502 aa11.77□□□□□ -0.52
HMGCR-212ENST00000514315 TROQ12816 1431 aaPredicted RBP11.77□□□□□ -0.53
HMGCR-212ENST00000514315 UBAP1LF5GYI3 381 aa11.76□□□□□ -0.53
HMGCR-212ENST00000514315 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
HMGCR-212ENST00000514315 CDK11AQ9UQ88 783 aaPredicted RBP11.76□□□□□ -0.53
HMGCR-212ENST00000514315 ZMYM3Q14202 1370 aa11.76□□□□□ -0.53
HMGCR-212ENST00000514315 EEA1Q15075 1411 aa11.76□□□□□ -0.53
HMGCR-212ENST00000514315 ARHGAP35Q9NRY4 1499 aa11.76□□□□□ -0.53
HMGCR-212ENST00000514315 ITSN2Q9NZM3 1697 aa11.75□□□□□ -0.53
HMGCR-212ENST00000514315 CDC42BPAQ5VT25 1732 aa11.74□□□□□ -0.53
HMGCR-212ENST00000514315 SP7Q8TDD2 431 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms