RNA–Protein interactions for RNA: ENST00000513060.5

RACK1-230, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,651 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-230ENST00000513060 ITSN2Q9NZM3 1697 aa20.81■□□□□ 0.92
RACK1-230ENST00000513060 ARHGAP5Q13017 1502 aa20.8■□□□□ 0.92
RACK1-230ENST00000513060 MYO5CQ9NQX4 1742 aa20.79■□□□□ 0.92
RACK1-230ENST00000513060 PREX2Q70Z35 1606 aa20.79■□□□□ 0.92
RACK1-230ENST00000513060 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
RACK1-230ENST00000513060 CDC42BPBQ9Y5S2 1711 aa20.78■□□□□ 0.92
RACK1-230ENST00000513060 PTPN23Q9H3S7 1636 aa20.77■□□□□ 0.91
RACK1-230ENST00000513060 ARAP3Q8WWN8 1544 aa20.77■□□□□ 0.91
RACK1-230ENST00000513060 MAP3K4Q9Y6R4 1608 aa20.75■□□□□ 0.91
RACK1-230ENST00000513060 FANCAO15360 1455 aa20.75■□□□□ 0.91
RACK1-230ENST00000513060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.75■□□□□ 0.91
RACK1-230ENST00000513060 TCOF1Q13428 1488 aaKnown RBP20.75■□□□□ 0.91
RACK1-230ENST00000513060 KIF13AQ9H1H9 1805 aa20.73■□□□□ 0.91
RACK1-230ENST00000513060 CAMSAP2Q08AD1 1489 aa20.73■□□□□ 0.91
RACK1-230ENST00000513060 ITGAEP38570 1179 aa20.73■□□□□ 0.91
RACK1-230ENST00000513060 PCGF6Q9BYE7 350 aa20.73■□□□□ 0.91
RACK1-230ENST00000513060 HNRNPMP52272 730 aaKnown RBP eCLIP20.71■□□□□ 0.912e-9■■■□□ 17.5
RACK1-230ENST00000513060 SAMD9LQ8IVG5 1584 aa20.7■□□□□ 0.9
RACK1-230ENST00000513060 AKNAQ7Z591 1439 aa20.69■□□□□ 0.9
RACK1-230ENST00000513060 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
RACK1-230ENST00000513060 KIAA1107Q9UPP5 1409 aa20.67■□□□□ 0.9
RACK1-230ENST00000513060 TSPOAP1O95153 1857 aa20.66■□□□□ 0.9
RACK1-230ENST00000513060 NEO1Q92859 1461 aa20.66■□□□□ 0.9
RACK1-230ENST00000513060 TEX14Q8IWB6 1497 aa20.65■□□□□ 0.9
RACK1-230ENST00000513060 MBD5Q9P267 1494 aa20.65■□□□□ 0.9
RACK1-230ENST00000513060 ADGRL1O94910 1474 aa20.65■□□□□ 0.9
RACK1-230ENST00000513060 RSPH4AQ5TD94 716 aa20.64■□□□□ 0.9
RACK1-230ENST00000513060 SCAPERQ9BY12 1400 aa20.64■□□□□ 0.9
RACK1-230ENST00000513060 SYCP2Q9BX26 1530 aa20.64■□□□□ 0.89
RACK1-230ENST00000513060 ARHGEF12Q9NZN5 1544 aa20.64■□□□□ 0.89
RACK1-230ENST00000513060 ABCC1P33527 1531 aa20.63■□□□□ 0.89
RACK1-230ENST00000513060 CFAP74Q9C0B2 1584 aa20.63■□□□□ 0.89
RACK1-230ENST00000513060 ABCC5O15440 1437 aa20.63■□□□□ 0.89
RACK1-230ENST00000513060 PPRC1Q5VV67 1664 aaKnown RBP20.63■□□□□ 0.89
RACK1-230ENST00000513060 DAPK1P53355 1430 aa20.62■□□□□ 0.89
RACK1-230ENST00000513060 PTPRKQ15262 1439 aa20.61■□□□□ 0.89
RACK1-230ENST00000513060 TSPY4P0CV99 314 aa20.61■□□□□ 0.89
RACK1-230ENST00000513060 TSPY10P0CW01 314 aa20.61■□□□□ 0.89
RACK1-230ENST00000513060 AFAP1Q8N556 730 aa20.61■□□□□ 0.89
RACK1-230ENST00000513060 CHIC2Q9UKJ5 165 aa20.61■□□□□ 0.89
RACK1-230ENST00000513060 TRAPPC8Q9Y2L5 1435 aa20.6■□□□□ 0.89
RACK1-230ENST00000513060 CCDC141Q6ZP82 1450 aa20.59■□□□□ 0.89
RACK1-230ENST00000513060 ARHGEF5Q12774 1597 aa20.58■□□□□ 0.89
RACK1-230ENST00000513060 DNMT1P26358 1616 aaKnown RBP20.58■□□□□ 0.89
RACK1-230ENST00000513060 RAPGEF3O95398 923 aa20.57■□□□□ 0.88
RACK1-230ENST00000513060 DENND4BO75064 1496 aaPredicted RBP20.55■□□□□ 0.88
RACK1-230ENST00000513060 POGZQ7Z3K3 1410 aa20.53■□□□□ 0.88
RACK1-230ENST00000513060 C9orf84Q5VXU9 1444 aa20.53■□□□□ 0.88
RACK1-230ENST00000513060 SPAG9O60271 1321 aaKnown RBP20.52■□□□□ 0.88
RACK1-230ENST00000513060 ZNF518AQ6AHZ1 1483 aa20.52■□□□□ 0.88
RACK1-230ENST00000513060 SHANK2Q9UPX8 1470 aa20.51■□□□□ 0.87
RACK1-230ENST00000513060 RRP7BPQ9NSQ0 103 aa20.51■□□□□ 0.87
RACK1-230ENST00000513060 MYT1LQ9UL68 1186 aa20.5■□□□□ 0.87
RACK1-230ENST00000513060 COL17A1Q9UMD9 1497 aaPredicted RBP20.5■□□□□ 0.87
RACK1-230ENST00000513060 ROCK1Q13464 1354 aa20.49■□□□□ 0.87
RACK1-230ENST00000513060 ANKRD30AQ9BXX3 1397 aa20.48■□□□□ 0.87
RACK1-230ENST00000513060 CROCC2H7BZ55 1655 aa20.48■□□□□ 0.87
RACK1-230ENST00000513060 NCOA1Q15788 1441 aa20.48■□□□□ 0.87
RACK1-230ENST00000513060 RTEL1-TNFRSF6BF6WH68 1400 aa20.45■□□□□ 0.86
RACK1-230ENST00000513060 ADGRL2O95490 1459 aa20.45■□□□□ 0.86
RACK1-230ENST00000513060 KDM5CP41229 1560 aa20.45■□□□□ 0.86
RACK1-230ENST00000513060 MAST1Q9Y2H9 1570 aa20.45■□□□□ 0.86
RACK1-230ENST00000513060 RICTORQ6R327 1708 aa20.43■□□□□ 0.86
RACK1-230ENST00000513060 HFM1A2PYH4 1435 aa20.43■□□□□ 0.86
RACK1-230ENST00000513060 NAIPQ13075 1403 aa20.43■□□□□ 0.86
RACK1-230ENST00000513060 MLH3Q9UHC1 1453 aa20.42■□□□□ 0.86
RACK1-230ENST00000513060 FRMPD1Q5SYB0 1578 aa20.42■□□□□ 0.86
RACK1-230ENST00000513060 KIF15Q9NS87 1388 aa20.42■□□□□ 0.86
RACK1-230ENST00000513060 ZFYVE16Q7Z3T8 1539 aa20.42■□□□□ 0.86
RACK1-230ENST00000513060 SETD5Q9C0A6 1442 aa20.41■□□□□ 0.86
RACK1-230ENST00000513060 ATP7AQ04656 1500 aa20.41■□□□□ 0.86
RACK1-230ENST00000513060 ADGBQ8N7X0 1667 aa20.4■□□□□ 0.86
RACK1-230ENST00000513060 INO80Q9ULG1 1556 aaPredicted RBP20.39■□□□□ 0.85
RACK1-230ENST00000513060 HECW2Q9P2P5 1572 aa20.38■□□□□ 0.85
RACK1-230ENST00000513060 RAB3GAP2Q9H2M9 1393 aa20.37■□□□□ 0.85
RACK1-230ENST00000513060 KIDINS220Q9ULH0 1771 aa20.37■□□□□ 0.85
RACK1-230ENST00000513060 KDM6BO15054 1643 aa20.37■□□□□ 0.85
RACK1-230ENST00000513060 PLXNC1O60486 1568 aa20.37■□□□□ 0.85
RACK1-230ENST00000513060 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
RACK1-230ENST00000513060 MAGI2Q86UL8 1455 aa20.36■□□□□ 0.85
RACK1-230ENST00000513060 ANKRD50Q9ULJ7 1429 aa20.35■□□□□ 0.85
RACK1-230ENST00000513060 YEATS2Q9ULM3 1422 aa20.35■□□□□ 0.85
RACK1-230ENST00000513060 HRCP23327 699 aa20.32■□□□□ 0.84
RACK1-230ENST00000513060 DHX29Q7Z478 1369 aaKnown RBP20.32■□□□□ 0.84
RACK1-230ENST00000513060 DUOX2Q9NRD8 1548 aa20.32■□□□□ 0.84
RACK1-230ENST00000513060 GCC2Q8IWJ2 1684 aa20.31■□□□□ 0.84
RACK1-230ENST00000513060 ABCA6Q8N139 1617 aa20.29■□□□□ 0.84
RACK1-230ENST00000513060 A2MP01023 1474 aa20.29■□□□□ 0.84
RACK1-230ENST00000513060 DIP2CQ9Y2E4 1556 aa20.29■□□□□ 0.84
RACK1-230ENST00000513060 ERBINQ96RT1 1412 aa20.28■□□□□ 0.84
RACK1-230ENST00000513060 ATP10AO60312 1499 aa20.27■□□□□ 0.84
RACK1-230ENST00000513060 KIF3BO15066 747 aa20.26■□□□□ 0.83
RACK1-230ENST00000513060 TRIM52Q96A61 297 aa20.26■□□□□ 0.83
RACK1-230ENST00000513060 ARHGEF40Q8TER5 1519 aa20.23■□□□□ 0.83
RACK1-230ENST00000513060 ACIN1Q9UKV3 1341 aaKnown RBP20.22■□□□□ 0.83
RACK1-230ENST00000513060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.83
RACK1-230ENST00000513060 NUP155O75694 1391 aa20.19■□□□□ 0.82
RACK1-230ENST00000513060 GGT6Q6P531 493 aa20.18■□□□□ 0.82
RACK1-230ENST00000513060 REREQ9P2R6 1566 aa20.17■□□□□ 0.82
RACK1-230ENST00000513060 EIF2AK4Q9P2K8 1649 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms