RNA–Protein interactions for RNA: ENST00000512805.5

RACK1-227, Transcript of receptor for activated C kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACK1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-227ENST00000512805 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
RACK1-227ENST00000512805 ZNF335Q9H4Z2 1342 aaPredicted RBP18.15■□□□□ 0.5
RACK1-227ENST00000512805 RAPGEF2Q9Y4G8 1499 aa18.12■□□□□ 0.49
RACK1-227ENST00000512805 ARID3CA6NKF2 412 aa18.11■□□□□ 0.49
RACK1-227ENST00000512805 ATP10AO60312 1499 aa18.1■□□□□ 0.49
RACK1-227ENST00000512805 HECW1Q76N89 1606 aa18.09■□□□□ 0.49
RACK1-227ENST00000512805 CFAP74Q9C0B2 1584 aa18.07■□□□□ 0.48
RACK1-227ENST00000512805 C9orf84Q5VXU9 1444 aa18.06■□□□□ 0.48
RACK1-227ENST00000512805 TRAPPC8Q9Y2L5 1435 aa18.06■□□□□ 0.48
RACK1-227ENST00000512805 RGS17Q9UGC6 210 aaPredicted RBP18.06■□□□□ 0.48
RACK1-227ENST00000512805 PIP4K2BP78356 416 aa18.05■□□□□ 0.48
RACK1-227ENST00000512805 TOM1O60784 492 aa18.04■□□□□ 0.48
RACK1-227ENST00000512805 C3P01024 1663 aa18.03■□□□□ 0.48
RACK1-227ENST00000512805 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
RACK1-227ENST00000512805 CAMSAP1Q5T5Y3 1602 aa18.02■□□□□ 0.48
RACK1-227ENST00000512805 NCKAP5LQ9HCH0 1330 aa17.99■□□□□ 0.47
RACK1-227ENST00000512805 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
RACK1-227ENST00000512805 FAM9AQ8IZU1 332 aaPredicted RBP17.98■□□□□ 0.47
RACK1-227ENST00000512805 PKD2Q13563 968 aa17.96■□□□□ 0.47
RACK1-227ENST00000512805 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
RACK1-227ENST00000512805 PLA2R1Q13018 1463 aa17.93■□□□□ 0.46
RACK1-227ENST00000512805 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.92■□□□□ 0.461e-34■■□□□ 13
RACK1-227ENST00000512805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.91■□□□□ 0.46
RACK1-227ENST00000512805 HNRNPUL2Q1KMD3 747 aaKnown RBP17.91■□□□□ 0.46
RACK1-227ENST00000512805 TCOF1Q13428 1488 aaKnown RBP17.91■□□□□ 0.46
RACK1-227ENST00000512805 NPATQ14207 1427 aa17.89■□□□□ 0.45
RACK1-227ENST00000512805 ALKQ9UM73 1620 aa17.89■□□□□ 0.45
RACK1-227ENST00000512805 CPS1P31327 1500 aa17.89■□□□□ 0.45
RACK1-227ENST00000512805 RAPGEF6Q8TEU7 1601 aa17.88■□□□□ 0.45
RACK1-227ENST00000512805 PPP6R1Q9UPN7 881 aa17.88■□□□□ 0.45
RACK1-227ENST00000512805 REREQ9P2R6 1566 aa17.88■□□□□ 0.45
RACK1-227ENST00000512805 AGLP35573 1532 aa17.87■□□□□ 0.45
RACK1-227ENST00000512805 PTPRKQ15262 1439 aa17.87■□□□□ 0.45
RACK1-227ENST00000512805 PLEKHD1A6NEE1 506 aa17.87■□□□□ 0.45
RACK1-227ENST00000512805 POTEAQ6S8J7 498 aa17.87■□□□□ 0.45
RACK1-227ENST00000512805 NUP153P49790 1475 aaKnown RBP17.85■□□□□ 0.45
RACK1-227ENST00000512805 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
RACK1-227ENST00000512805 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
RACK1-227ENST00000512805 ESF1Q9H501 851 aaKnown RBP17.84■□□□□ 0.45
RACK1-227ENST00000512805 P3H3Q8IVL6 736 aa17.83■□□□□ 0.45
RACK1-227ENST00000512805 PLCH2O75038 1416 aa17.83■□□□□ 0.44
RACK1-227ENST00000512805 SRCAPQ6ZRS2 3230 aa17.82■□□□□ 0.44
RACK1-227ENST00000512805 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
RACK1-227ENST00000512805 SHANK2Q9UPX8 1470 aa17.8■□□□□ 0.44
RACK1-227ENST00000512805 DIP2CQ9Y2E4 1556 aa17.8■□□□□ 0.44
RACK1-227ENST00000512805 KDM5CP41229 1560 aa17.78■□□□□ 0.44
RACK1-227ENST00000512805 ZNF518AQ6AHZ1 1483 aa17.78■□□□□ 0.44
RACK1-227ENST00000512805 MROH2AA6NES4 1674 aa17.76■□□□□ 0.43
RACK1-227ENST00000512805 AFAP1Q8N556 730 aa17.74■□□□□ 0.43
RACK1-227ENST00000512805 CEP170BQ9Y4F5 1589 aaPredicted RBP17.74■□□□□ 0.43
RACK1-227ENST00000512805 ZMYM3Q14202 1370 aa17.74■□□□□ 0.43
RACK1-227ENST00000512805 SETD1AO15047 1707 aaKnown RBP17.74■□□□□ 0.43
RACK1-227ENST00000512805 SUPT6HQ7KZ85 1726 aaKnown RBP17.74■□□□□ 0.43
RACK1-227ENST00000512805 EFCAB2Q5VUJ9 269 aa17.73■□□□□ 0.43
RACK1-227ENST00000512805 UPF1Q92900 1129 aaKnown RBP eCLIP17.73■□□□□ 0.43
RACK1-227ENST00000512805 MYO3AQ8NEV4 1616 aa17.73■□□□□ 0.43
RACK1-227ENST00000512805 SAMD9Q5K651 1589 aa17.72■□□□□ 0.43
RACK1-227ENST00000512805 ABCA6Q8N139 1617 aa17.71■□□□□ 0.43
RACK1-227ENST00000512805 MLH3Q9UHC1 1453 aa17.7■□□□□ 0.42
RACK1-227ENST00000512805 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
RACK1-227ENST00000512805 VWDEQ8N2E2 1590 aa17.67■□□□□ 0.42
RACK1-227ENST00000512805 NEURL4Q96JN8 1562 aa17.66■□□□□ 0.42
RACK1-227ENST00000512805 PRXQ9BXM0 1461 aa17.66■□□□□ 0.42
RACK1-227ENST00000512805 MYT1LQ9UL68 1186 aa17.64■□□□□ 0.42
RACK1-227ENST00000512805 POLR1AO95602 1720 aaPredicted RBP17.62■□□□□ 0.41
RACK1-227ENST00000512805 MYO5CQ9NQX4 1742 aa17.62■□□□□ 0.41
RACK1-227ENST00000512805 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
RACK1-227ENST00000512805 A2ML1A8K2U0 1454 aa17.6■□□□□ 0.41
RACK1-227ENST00000512805 RNF17Q9BXT8 1623 aaKnown RBP17.6■□□□□ 0.41
RACK1-227ENST00000512805 LRRC7Q96NW7 1537 aa17.59■□□□□ 0.41
RACK1-227ENST00000512805 KIDINS220Q9ULH0 1771 aa17.55■□□□□ 0.4
RACK1-227ENST00000512805 CLTCQ00610 1675 aaKnown RBP17.54■□□□□ 0.4
RACK1-227ENST00000512805 MED14O60244 1454 aa17.53■□□□□ 0.4
RACK1-227ENST00000512805 STRCP1A6NGW2 1772 aa17.53■□□□□ 0.4
RACK1-227ENST00000512805 FAM135BQ49AJ0 1406 aa17.52■□□□□ 0.39
RACK1-227ENST00000512805 ARHGAP5Q13017 1502 aa17.51■□□□□ 0.39
RACK1-227ENST00000512805 ANKLE2Q86XL3 938 aa17.51■□□□□ 0.39
RACK1-227ENST00000512805 SYNMO15061 1565 aa17.51■□□□□ 0.39
RACK1-227ENST00000512805 CDK13Q14004 1512 aaKnown RBP17.5■□□□□ 0.39
RACK1-227ENST00000512805 NPHP4O75161 1426 aaPredicted RBP17.48■□□□□ 0.39
RACK1-227ENST00000512805 DEPDC5O75140 1603 aa17.47■□□□□ 0.39
RACK1-227ENST00000512805 ABCC1P33527 1531 aa17.44■□□□□ 0.38
RACK1-227ENST00000512805 KIF14Q15058 1648 aa17.43■□□□□ 0.38
RACK1-227ENST00000512805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.43■□□□□ 0.38
RACK1-227ENST00000512805 ITSN2Q9NZM3 1697 aa17.41■□□□□ 0.38
RACK1-227ENST00000512805 CDC42BPBQ9Y5S2 1711 aa17.41■□□□□ 0.38
RACK1-227ENST00000512805 THEMISQ8N1K5 641 aaPredicted RBP17.41■□□□□ 0.38
RACK1-227ENST00000512805 TRIM52Q96A61 297 aa17.41■□□□□ 0.38
RACK1-227ENST00000512805 IQGAP1P46940 1657 aa17.41■□□□□ 0.38
RACK1-227ENST00000512805 PLXNC1O60486 1568 aa17.39■□□□□ 0.37
RACK1-227ENST00000512805 TNRQ92752 1358 aa17.38■□□□□ 0.37
RACK1-227ENST00000512805 XIRP1Q702N8 1843 aaKnown RBP17.38■□□□□ 0.37
RACK1-227ENST00000512805 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
RACK1-227ENST00000512805 GGT6Q6P531 493 aa17.37■□□□□ 0.37
RACK1-227ENST00000512805 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
RACK1-227ENST00000512805 CDK12Q9NYV4 1490 aaPredicted RBP17.36■□□□□ 0.37
RACK1-227ENST00000512805 SAMD9LQ8IVG5 1584 aa17.35■□□□□ 0.37
RACK1-227ENST00000512805 TROQ12816 1431 aaPredicted RBP17.35■□□□□ 0.37
RACK1-227ENST00000512805 JCADQ9P266 1359 aa17.33■□□□□ 0.37
RACK1-227ENST00000512805 FBXO31Q5XUX0 539 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms