RNA–Protein interactions for RNA: ENST00000509990.5

MATR3-237, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-237ENST00000509990 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
MATR3-237ENST00000509990 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
MATR3-237ENST00000509990 SUPT6HQ7KZ85 1726 aaKnown RBP17.29■□□□□ 0.36
MATR3-237ENST00000509990 CDK11AQ9UQ88 783 aaPredicted RBP17.28■□□□□ 0.36
MATR3-237ENST00000509990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.362e-7■■■□□ 18.1
MATR3-237ENST00000509990 NUP153P49790 1475 aaKnown RBP17.28■□□□□ 0.36
MATR3-237ENST00000509990 EHBP1L1Q8N3D4 1523 aa17.27■□□□□ 0.36
MATR3-237ENST00000509990 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
MATR3-237ENST00000509990 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
MATR3-237ENST00000509990 PKD2Q13563 968 aa17.26■□□□□ 0.35
MATR3-237ENST00000509990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.355e-19■■□□□ 13.5
MATR3-237ENST00000509990 PLEKHD1A6NEE1 506 aa17.25■□□□□ 0.35
MATR3-237ENST00000509990 EIF4G2P78344 907 aaKnown RBP eCLIP17.24■□□□□ 0.35
MATR3-237ENST00000509990 ABCC5O15440 1437 aa17.24■□□□□ 0.35
MATR3-237ENST00000509990 RGL3Q3MIN7 710 aa17.23■□□□□ 0.35
MATR3-237ENST00000509990 KIAA0586Q9BVV6 1533 aa17.22■□□□□ 0.35
MATR3-237ENST00000509990 WDR62O43379 1518 aa17.22■□□□□ 0.35
MATR3-237ENST00000509990 EIF4G3O43432 1585 aaKnown RBP17.22■□□□□ 0.35
MATR3-237ENST00000509990 DAPK1P53355 1430 aa17.21■□□□□ 0.34
MATR3-237ENST00000509990 TIMELESSQ9UNS1 1208 aa17.2■□□□□ 0.34
MATR3-237ENST00000509990 HECW1Q76N89 1606 aa17.2■□□□□ 0.34
MATR3-237ENST00000509990 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
MATR3-237ENST00000509990 KIAA0556O60303 1618 aa17.15■□□□□ 0.34
MATR3-237ENST00000509990 ARHGEF11O15085 1522 aa17.15■□□□□ 0.34
MATR3-237ENST00000509990 KDM5BQ9UGL1 1544 aa17.13■□□□□ 0.33
MATR3-237ENST00000509990 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
MATR3-237ENST00000509990 SALL2Q9Y467 1007 aaPredicted RBP17.13■□□□□ 0.33
MATR3-237ENST00000509990 NUP155O75694 1391 aa17.12■□□□□ 0.33
MATR3-237ENST00000509990 KIF14Q15058 1648 aa17.12■□□□□ 0.33
MATR3-237ENST00000509990 TSPY4P0CV99 314 aa17.12■□□□□ 0.33
MATR3-237ENST00000509990 TSPY10P0CW01 314 aa17.12■□□□□ 0.33
MATR3-237ENST00000509990 ANKRD30BQ9BXX2 1392 aa17.12■□□□□ 0.33
MATR3-237ENST00000509990 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
MATR3-237ENST00000509990 DCAF11Q8TEB1 546 aa17.11■□□□□ 0.33
MATR3-237ENST00000509990 TROQ12816 1431 aaPredicted RBP17.09■□□□□ 0.33
MATR3-237ENST00000509990 GPATCH8Q9UKJ3 1502 aaKnown RBP17.09■□□□□ 0.33
MATR3-237ENST00000509990 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
MATR3-237ENST00000509990 TCOF1Q13428 1488 aaKnown RBP17.09■□□□□ 0.33
MATR3-237ENST00000509990 KIF7Q2M1P5 1343 aa17.09■□□□□ 0.33
MATR3-237ENST00000509990 MIA2Q96PC5 1412 aa17.09■□□□□ 0.33
MATR3-237ENST00000509990 SYNJ2O15056 1496 aa17.08■□□□□ 0.33
MATR3-237ENST00000509990 NEFLP07196 543 aa17.08■□□□□ 0.33
MATR3-237ENST00000509990 CAMSAP2Q08AD1 1489 aa17.08■□□□□ 0.32
MATR3-237ENST00000509990 BCL11AQ9H165 835 aa17.08■□□□□ 0.32
MATR3-237ENST00000509990 RAPGEF6Q8TEU7 1601 aa17.07■□□□□ 0.32
MATR3-237ENST00000509990 CARMIL2Q6F5E8 1435 aa17.07■□□□□ 0.32
MATR3-237ENST00000509990 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
MATR3-237ENST00000509990 NCOA1Q15788 1441 aa17.06■□□□□ 0.32
MATR3-237ENST00000509990 CCER2I3L3R5 266 aa17.06■□□□□ 0.32
MATR3-237ENST00000509990 PTPRGP23470 1445 aa17.05■□□□□ 0.32
MATR3-237ENST00000509990 ATP10BO94823 1461 aa17.05■□□□□ 0.32
MATR3-237ENST00000509990 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
MATR3-237ENST00000509990 CARD11Q9BXL7 1154 aa17.03■□□□□ 0.32
MATR3-237ENST00000509990 CCDC7Q96M83 1385 aa17.02■□□□□ 0.32
MATR3-237ENST00000509990 AKNAQ7Z591 1439 aa17.02■□□□□ 0.31
MATR3-237ENST00000509990 ST20-MTHFSA0A0A6YYL1 179 aa17.02■□□□□ 0.31
MATR3-237ENST00000509990 ANKRD50Q9ULJ7 1429 aa17.01■□□□□ 0.31
MATR3-237ENST00000509990 NBPF1Q3BBV0 1214 aa17■□□□□ 0.31
MATR3-237ENST00000509990 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
MATR3-237ENST00000509990 ANKRD30AQ9BXX3 1397 aa16.99■□□□□ 0.31
MATR3-237ENST00000509990 PZPP20742 1482 aa16.99■□□□□ 0.31
MATR3-237ENST00000509990 KIF15Q9NS87 1388 aa16.97■□□□□ 0.31
MATR3-237ENST00000509990 RPRD2Q5VT52 1461 aaKnown RBP16.96■□□□□ 0.31
MATR3-237ENST00000509990 ERCC6L2Q5T890 1561 aa16.96■□□□□ 0.3
MATR3-237ENST00000509990 USP47Q96K76 1375 aa16.95■□□□□ 0.3
MATR3-237ENST00000509990 C9orf84Q5VXU9 1444 aa16.95■□□□□ 0.3
MATR3-237ENST00000509990 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
MATR3-237ENST00000509990 ROCK1Q13464 1354 aa16.94■□□□□ 0.3
MATR3-237ENST00000509990 NUP160Q12769 1436 aa16.94■□□□□ 0.3
MATR3-237ENST00000509990 DNMT1P26358 1616 aaKnown RBP16.93■□□□□ 0.3
MATR3-237ENST00000509990 B4GALNT3Q6L9W6 998 aa16.92■□□□□ 0.3
MATR3-237ENST00000509990 GCC2Q8IWJ2 1684 aa16.92■□□□□ 0.3
MATR3-237ENST00000509990 TEX14Q8IWB6 1497 aa16.92■□□□□ 0.3
MATR3-237ENST00000509990 CNTLNQ9NXG0 1405 aa16.91■□□□□ 0.3
MATR3-237ENST00000509990 KIAA1107Q9UPP5 1409 aa16.9■□□□□ 0.3
MATR3-237ENST00000509990 CC2D1BQ5T0F9 858 aaKnown RBP16.89■□□□□ 0.29
MATR3-237ENST00000509990 ANP32EQ9BTT0 268 aa16.85■□□□□ 0.29
MATR3-237ENST00000509990 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
MATR3-237ENST00000509990 ABCC10Q5T3U5 1492 aa16.83■□□□□ 0.28
MATR3-237ENST00000509990 SPATA31E1Q6ZUB1 1445 aa16.83■□□□□ 0.28
MATR3-237ENST00000509990 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.28
MATR3-237ENST00000509990 PLEKHH2Q8IVE3 1493 aa16.81■□□□□ 0.28
MATR3-237ENST00000509990 RBM19Q9Y4C8 960 aaKnown RBP16.81■□□□□ 0.28
MATR3-237ENST00000509990 ARHGAP5Q13017 1502 aa16.8■□□□□ 0.28
MATR3-237ENST00000509990 ABCA8O94911 1581 aa16.79■□□□□ 0.28
MATR3-237ENST00000509990 PRKCSHP14314 528 aaPredicted RBP16.79■□□□□ 0.28
MATR3-237ENST00000509990 CDC42BPAQ5VT25 1732 aa16.78■□□□□ 0.28
MATR3-237ENST00000509990 SYCP2Q9BX26 1530 aa16.78■□□□□ 0.28
MATR3-237ENST00000509990 MBD5Q9P267 1494 aa16.78■□□□□ 0.28
MATR3-237ENST00000509990 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.28
MATR3-237ENST00000509990 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.28
MATR3-237ENST00000509990 BCORL1Q5H9F3 1711 aa16.76■□□□□ 0.27
MATR3-237ENST00000509990 DHX29Q7Z478 1369 aaKnown RBP16.76■□□□□ 0.27
MATR3-237ENST00000509990 KIF3BO15066 747 aa16.74■□□□□ 0.27
MATR3-237ENST00000509990 CCDC144AA2RUR9 1427 aa16.73■□□□□ 0.27
MATR3-237ENST00000509990 CHD1O14646 1710 aa16.72■□□□□ 0.27
MATR3-237ENST00000509990 ARHGEF12Q9NZN5 1544 aa16.72■□□□□ 0.27
MATR3-237ENST00000509990 TRAPPC8Q9Y2L5 1435 aa16.72■□□□□ 0.27
MATR3-237ENST00000509990 EFCAB2Q5VUJ9 269 aa16.72■□□□□ 0.27
MATR3-237ENST00000509990 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms