RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 CDC42BPAQ5VT25 1732 aa9.61□□□□□ -0.87
RACK1-220ENST00000508963 CDC42BPBQ9Y5S2 1711 aa9.61□□□□□ -0.87
RACK1-220ENST00000508963 MAP3K4Q9Y6R4 1608 aa9.6□□□□□ -0.87
RACK1-220ENST00000508963 HNRNPMP52272 730 aaKnown RBP eCLIP9.6□□□□□ -0.872e-9■■■□□ 17.5
RACK1-220ENST00000508963 ZNF777Q9ULD5 760 aaPredicted RBP9.6□□□□□ -0.87
RACK1-220ENST00000508963 MBD5Q9P267 1494 aa9.59□□□□□ -0.87
RACK1-220ENST00000508963 KIF13AQ9H1H9 1805 aa9.59□□□□□ -0.87
RACK1-220ENST00000508963 KIAA1107Q9UPP5 1409 aa9.59□□□□□ -0.87
RACK1-220ENST00000508963 TRHP20396 242 aaPredicted RBP9.59□□□□□ -0.87
RACK1-220ENST00000508963 RSPH4AQ5TD94 716 aa9.59□□□□□ -0.87
RACK1-220ENST00000508963 ARHGEF12Q9NZN5 1544 aa9.59□□□□□ -0.87
RACK1-220ENST00000508963 FANCAO15360 1455 aa9.59□□□□□ -0.87
RACK1-220ENST00000508963 AKNAQ7Z591 1439 aa9.58□□□□□ -0.88
RACK1-220ENST00000508963 PREX2Q70Z35 1606 aa9.58□□□□□ -0.88
RACK1-220ENST00000508963 FAM50AQ14320 339 aaKnown RBP9.58□□□□□ -0.88
RACK1-220ENST00000508963 PTPRKQ15262 1439 aa9.57□□□□□ -0.88
RACK1-220ENST00000508963 ARHGAP5Q13017 1502 aa9.57□□□□□ -0.88
RACK1-220ENST00000508963 NEO1Q92859 1461 aa9.57□□□□□ -0.88
RACK1-220ENST00000508963 SAMD9LQ8IVG5 1584 aa9.57□□□□□ -0.88
RACK1-220ENST00000508963 ABCC5O15440 1437 aa9.56□□□□□ -0.88
RACK1-220ENST00000508963 PTPN23Q9H3S7 1636 aa9.56□□□□□ -0.88
RACK1-220ENST00000508963 MYO5CQ9NQX4 1742 aa9.56□□□□□ -0.88
RACK1-220ENST00000508963 PPRC1Q5VV67 1664 aaKnown RBP9.56□□□□□ -0.88
RACK1-220ENST00000508963 CAMSAP2Q08AD1 1489 aa9.56□□□□□ -0.88
RACK1-220ENST00000508963 AFAP1Q8N556 730 aa9.56□□□□□ -0.88
RACK1-220ENST00000508963 SCAPERQ9BY12 1400 aa9.56□□□□□ -0.88
RACK1-220ENST00000508963 ITSN2Q9NZM3 1697 aa9.55□□□□□ -0.88
RACK1-220ENST00000508963 COL17A1Q9UMD9 1497 aaPredicted RBP9.55□□□□□ -0.88
RACK1-220ENST00000508963 TRAPPC8Q9Y2L5 1435 aa9.55□□□□□ -0.88
RACK1-220ENST00000508963 PLEKHH2Q8IVE3 1493 aa9.54□□□□□ -0.88
RACK1-220ENST00000508963 RAPGEF3O95398 923 aa9.53□□□□□ -0.88
RACK1-220ENST00000508963 PCGF6Q9BYE7 350 aa9.53□□□□□ -0.88
RACK1-220ENST00000508963 DAPK1P53355 1430 aa9.53□□□□□ -0.88
RACK1-220ENST00000508963 ADGRL1O94910 1474 aa9.53□□□□□ -0.88
RACK1-220ENST00000508963 TEX14Q8IWB6 1497 aa9.53□□□□□ -0.88
RACK1-220ENST00000508963 ABCC1P33527 1531 aa9.52□□□□□ -0.88
RACK1-220ENST00000508963 TSPY4P0CV99 314 aa9.52□□□□□ -0.89
RACK1-220ENST00000508963 TSPY10P0CW01 314 aa9.52□□□□□ -0.89
RACK1-220ENST00000508963 ITGAEP38570 1179 aa9.52□□□□□ -0.89
RACK1-220ENST00000508963 ARHGEF5Q12774 1597 aa9.52□□□□□ -0.89
RACK1-220ENST00000508963 CHIC2Q9UKJ5 165 aa9.51□□□□□ -0.89
RACK1-220ENST00000508963 SYCP2Q9BX26 1530 aa9.51□□□□□ -0.89
RACK1-220ENST00000508963 NCOA1Q15788 1441 aa9.5□□□□□ -0.89
RACK1-220ENST00000508963 DENND4BO75064 1496 aaPredicted RBP9.5□□□□□ -0.89
RACK1-220ENST00000508963 ROCK1Q13464 1354 aa9.5□□□□□ -0.89
RACK1-220ENST00000508963 DNMT1P26358 1616 aaKnown RBP9.49□□□□□ -0.89
RACK1-220ENST00000508963 RTEL1-TNFRSF6BF6WH68 1400 aa9.49□□□□□ -0.89
RACK1-220ENST00000508963 POGZQ7Z3K3 1410 aa9.49□□□□□ -0.89
RACK1-220ENST00000508963 TSPOAP1O95153 1857 aa9.49□□□□□ -0.89
RACK1-220ENST00000508963 CCDC141Q6ZP82 1450 aa9.49□□□□□ -0.89
RACK1-220ENST00000508963 SPAG9O60271 1321 aaKnown RBP9.49□□□□□ -0.89
RACK1-220ENST00000508963 CFAP74Q9C0B2 1584 aa9.49□□□□□ -0.89
RACK1-220ENST00000508963 C9orf84Q5VXU9 1444 aa9.48□□□□□ -0.89
RACK1-220ENST00000508963 ADGRL2O95490 1459 aa9.47□□□□□ -0.89
RACK1-220ENST00000508963 ZNF518AQ6AHZ1 1483 aa9.47□□□□□ -0.89
RACK1-220ENST00000508963 MLH3Q9UHC1 1453 aa9.47□□□□□ -0.89
RACK1-220ENST00000508963 SHANK2Q9UPX8 1470 aa9.47□□□□□ -0.89
RACK1-220ENST00000508963 HRCP23327 699 aa9.47□□□□□ -0.89
RACK1-220ENST00000508963 RRP7BPQ9NSQ0 103 aa9.47□□□□□ -0.89
RACK1-220ENST00000508963 KDM5CP41229 1560 aa9.46□□□□□ -0.89
RACK1-220ENST00000508963 MAST1Q9Y2H9 1570 aa9.46□□□□□ -0.89
RACK1-220ENST00000508963 NAIPQ13075 1403 aa9.46□□□□□ -0.9
RACK1-220ENST00000508963 FRMPD1Q5SYB0 1578 aa9.46□□□□□ -0.9
RACK1-220ENST00000508963 ANKRD30AQ9BXX3 1397 aa9.45□□□□□ -0.9
RACK1-220ENST00000508963 HFM1A2PYH4 1435 aa9.45□□□□□ -0.9
RACK1-220ENST00000508963 RICTORQ6R327 1708 aa9.45□□□□□ -0.9
RACK1-220ENST00000508963 SETD5Q9C0A6 1442 aa9.44□□□□□ -0.9
RACK1-220ENST00000508963 MAGI2Q86UL8 1455 aa9.44□□□□□ -0.9
RACK1-220ENST00000508963 YEATS2Q9ULM3 1422 aa9.43□□□□□ -0.9
RACK1-220ENST00000508963 DHX29Q7Z478 1369 aaKnown RBP9.43□□□□□ -0.9
RACK1-220ENST00000508963 KIDINS220Q9ULH0 1771 aa9.42□□□□□ -0.9
RACK1-220ENST00000508963 CROCC2H7BZ55 1655 aa9.42□□□□□ -0.9
RACK1-220ENST00000508963 ZMYM4Q5VZL5 1548 aa9.42□□□□□ -0.9
RACK1-220ENST00000508963 KIF15Q9NS87 1388 aa9.42□□□□□ -0.9
RACK1-220ENST00000508963 INO80Q9ULG1 1556 aaPredicted RBP9.41□□□□□ -0.9
RACK1-220ENST00000508963 ATP7AQ04656 1500 aa9.41□□□□□ -0.9
RACK1-220ENST00000508963 ZFYVE16Q7Z3T8 1539 aa9.41□□□□□ -0.9
RACK1-220ENST00000508963 ANKRD50Q9ULJ7 1429 aa9.4□□□□□ -0.9
RACK1-220ENST00000508963 RAB3GAP2Q9H2M9 1393 aa9.4□□□□□ -0.9
RACK1-220ENST00000508963 PLXNC1O60486 1568 aa9.4□□□□□ -0.9
RACK1-220ENST00000508963 ATP10AO60312 1499 aa9.4□□□□□ -0.91
RACK1-220ENST00000508963 HECW2Q9P2P5 1572 aa9.39□□□□□ -0.91
RACK1-220ENST00000508963 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
RACK1-220ENST00000508963 KDM6BO15054 1643 aa9.38□□□□□ -0.91
RACK1-220ENST00000508963 DUOX2Q9NRD8 1548 aa9.38□□□□□ -0.91
RACK1-220ENST00000508963 A2MP01023 1474 aa9.38□□□□□ -0.91
RACK1-220ENST00000508963 DIP2CQ9Y2E4 1556 aa9.37□□□□□ -0.91
RACK1-220ENST00000508963 ADGBQ8N7X0 1667 aa9.37□□□□□ -0.91
RACK1-220ENST00000508963 ERBINQ96RT1 1412 aa9.37□□□□□ -0.91
RACK1-220ENST00000508963 ACIN1Q9UKV3 1341 aaKnown RBP9.36□□□□□ -0.91
RACK1-220ENST00000508963 ABCA6Q8N139 1617 aa9.36□□□□□ -0.91
RACK1-220ENST00000508963 KIF3BO15066 747 aa9.36□□□□□ -0.91
RACK1-220ENST00000508963 REREQ9P2R6 1566 aa9.35□□□□□ -0.91
RACK1-220ENST00000508963 GCC2Q8IWJ2 1684 aa9.34□□□□□ -0.91
RACK1-220ENST00000508963 AGLP35573 1532 aa9.34□□□□□ -0.91
RACK1-220ENST00000508963 MPHOSPH9Q99550 1183 aa9.33□□□□□ -0.92
RACK1-220ENST00000508963 PPP6R1Q9UPN7 881 aa9.33□□□□□ -0.92
RACK1-220ENST00000508963 NUP155O75694 1391 aa9.33□□□□□ -0.92
RACK1-220ENST00000508963 ARHGEF40Q8TER5 1519 aa9.32□□□□□ -0.92
RACK1-220ENST00000508963 SIGLEC1Q9BZZ2 1709 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms